Click here to switch to the map view.

The map label for this gene is 197105342

Identifier: 197105342

GI number: 197105342

Start: 2105053

End: 2106009

Strand: Direct

Name: 197105342

Synonym: PHZ_c1879

Alternate gene names: NA

Gene position: 2105053-2106009 (Clockwise)

Preceding gene: 197105341

Following gene: 197105347

Centisome position: 52.68

GC content: 75.86

Gene sequence:

>957_bases
ATGAAGCCGGGCGCCGACCCGTCCGCCCAGGATCCGTCCGCCAAGGGCGGCTTGCACGCCCTGCGCGGGGAATGGGCCAA
GGCCGAGCCCCACCTGCGGCTGGCCGCCGCCCTGAAACCCGGCGACCCGGCCCGGCGGCACGCCCTGGCGCTGGCGCTGA
TGGCCCAGGGCAAGCTGCGCGAGGGCCTGCCGCTCTACGCCCACCGCTGGAGCGTGCCCGGGCTCGGGATCTCGCGGCCG
CGCTTCGACTGCCCCGAGTGGCGCGGCGAGGATCCGGCCGGCCGCCATATCGTGATCTTCCCCGAACAGGGCCTGGGCGA
CCAGATCATGTTCGCCCGCTACGCCCCCGCGCTGGCCGCGCGCGGCGCGGAGGTGACGCTGATATGCCTGCCGCCGCTGG
CCCGCCTGTTCGAGGCGCTGGGCGTGCGCGTGGTCGCCGCACAGGGCAGGATGGAGTTCCCCGACCCCGACTGTTGGGTG
CTGCTGGGCGACCTGCCGCTGCGGCTCGGCGCCTTCGAGATCCCCGGCGCCCCCTATCTGCGGGGCAAGGCGCAAGGCGC
CGCCAGGGCGGCCGGCGGCGTCGGCCTGGTGCGGCGCGGCAACCCGGCGCACCCGAACGACGCCAACCGCTCGCTGCCCG
ACGGCCTGACGGTCCCCTTCCCGACCGTCAGCCTGGATCCGGCGCACACCGGCGCGCGCGACATGCAGGACACCGCAAAC
ATCGTCGCGGGCCTGGACGCGGTGGTGACGGTGGACACCTCGGTGGCCCACCTGGCGGGGGCGATGGGCAAGCCGGTCCA
CATCCTGCTGCCCGCAGCCGGCGTAGACTGGCGTTGGGGCGAGGCGGCGCGGACGCCCTGGTATCCCACCGCCAGGCTGC
ATCGGCAGACGCAGCCCGGCGACTGGGGGCCGGTGCTGGCCGGCGTGGCGCGGGCGTTGGAGGCCGGCGGAGCCTAG

Upstream 100 bases:

>100_bases
TCGAGGCGGTCCCCGAGGCCACCCACACCAGCATCCTGGGCCTGACCCACGGCGAGGCCGTAGTGCGGGGGATCGAGCAC
GTCCTGGCGGCCAGCGGCCG

Downstream 100 bases:

>100_bases
AGACCCTGGTCCCTAGCCCTTCATCCGCTCGACGGTCTCGACGCTGGGATTGGCGCGCAGGGCGGCGGCGATGTGGGTCA
GGTGCTTGGCGTCCTGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; Tetratricopeptide Repeat-Containing Protein; TPR Repeat Protein; TPR Repeat Containing Protein; Tetratricopeptide Repeat Family Protein; Sulfotransferase; TPR Repeat; Exostosin Family Protein; FlbA Protein; Tetratricopeptide Tpr_2 Repeat Protein; Methyltransferase Type; Glycosyltransferase Family 9 Tpr Repeat Domain; TPR/Sulfotransferase Domain-Containing Protein; Flagellin Protein FlbA; O-Linked N-Acetylglucosamine Transferase

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKPGADPSAQDPSAKGGLHALRGEWAKAEPHLRLAAALKPGDPARRHALALALMAQGKLREGLPLYAHRWSVPGLGISRP
RFDCPEWRGEDPAGRHIVIFPEQGLGDQIMFARYAPALAARGAEVTLICLPPLARLFEALGVRVVAAQGRMEFPDPDCWV
LLGDLPLRLGAFEIPGAPYLRGKAQGAARAAGGVGLVRRGNPAHPNDANRSLPDGLTVPFPTVSLDPAHTGARDMQDTAN
IVAGLDAVVTVDTSVAHLAGAMGKPVHILLPAAGVDWRWGEAARTPWYPTARLHRQTQPGDWGPVLAGVARALEAGGA

Sequences:

>Translated_318_residues
MKPGADPSAQDPSAKGGLHALRGEWAKAEPHLRLAAALKPGDPARRHALALALMAQGKLREGLPLYAHRWSVPGLGISRP
RFDCPEWRGEDPAGRHIVIFPEQGLGDQIMFARYAPALAARGAEVTLICLPPLARLFEALGVRVVAAQGRMEFPDPDCWV
LLGDLPLRLGAFEIPGAPYLRGKAQGAARAAGGVGLVRRGNPAHPNDANRSLPDGLTVPFPTVSLDPAHTGARDMQDTAN
IVAGLDAVVTVDTSVAHLAGAMGKPVHILLPAAGVDWRWGEAARTPWYPTARLHRQTQPGDWGPVLAGVARALEAGGA
>Mature_318_residues
MKPGADPSAQDPSAKGGLHALRGEWAKAEPHLRLAAALKPGDPARRHALALALMAQGKLREGLPLYAHRWSVPGLGISRP
RFDCPEWRGEDPAGRHIVIFPEQGLGDQIMFARYAPALAARGAEVTLICLPPLARLFEALGVRVVAAQGRMEFPDPDCWV
LLGDLPLRLGAFEIPGAPYLRGKAQGAARAAGGVGLVRRGNPAHPNDANRSLPDGLTVPFPTVSLDPAHTGARDMQDTAN
IVAGLDAVVTVDTSVAHLAGAMGKPVHILLPAAGVDWRWGEAARTPWYPTARLHRQTQPGDWGPVLAGVARALEAGGA

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33572; Mature: 33572

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPGADPSAQDPSAKGGLHALRGEWAKAEPHLRLAAALKPGDPARRHALALALMAQGKLR
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHH
EGLPLYAHRWSVPGLGISRPRFDCPEWRGEDPAGRHIVIFPEQGLGDQIMFARYAPALAA
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC
RGAEVTLICLPPLARLFEALGVRVVAAQGRMEFPDPDCWVLLGDLPLRLGAFEIPGAPYL
CCCCEEEEECCHHHHHHHHHCEEEEEECCCCCCCCCCEEEEECCCCCEECEEECCCCCCC
RGKAQGAARAAGGVGLVRRGNPAHPNDANRSLPDGLTVPFPTVSLDPAHTGARDMQDTAN
CCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHH
IVAGLDAVVTVDTSVAHLAGAMGKPVHILLPAAGVDWRWGEAARTPWYPTARLHRQTQPG
HHHCCCEEEEECCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCC
DWGPVLAGVARALEAGGA
CCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPGADPSAQDPSAKGGLHALRGEWAKAEPHLRLAAALKPGDPARRHALALALMAQGKLR
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHH
EGLPLYAHRWSVPGLGISRPRFDCPEWRGEDPAGRHIVIFPEQGLGDQIMFARYAPALAA
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC
RGAEVTLICLPPLARLFEALGVRVVAAQGRMEFPDPDCWVLLGDLPLRLGAFEIPGAPYL
CCCCEEEEECCHHHHHHHHHCEEEEEECCCCCCCCCCEEEEECCCCCEECEEECCCCCCC
RGKAQGAARAAGGVGLVRRGNPAHPNDANRSLPDGLTVPFPTVSLDPAHTGARDMQDTAN
CCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHH
IVAGLDAVVTVDTSVAHLAGAMGKPVHILLPAAGVDWRWGEAARTPWYPTARLHRQTQPG
HHHCCCEEEEECCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCC
DWGPVLAGVARALEAGGA
CCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA