| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105341
Identifier: 197105341
GI number: 197105341
Start: 2104094
End: 2105056
Strand: Direct
Name: 197105341
Synonym: PHZ_c1878
Alternate gene names: NA
Gene position: 2104094-2105056 (Clockwise)
Preceding gene: 197105336
Following gene: 197105342
Centisome position: 52.65
GC content: 75.08
Gene sequence:
>963_bases TTGCAGGCTGGCCCCTGCCCCCGCTACGACGGACGGATGGTGAAGGTGCTGATCGGCCTGGCGGTGGTGCTGGGCGCATG GCTCGCGGCAGGGTTCGCGATCGTGGCGGCGGCGGGGGACGTGACGCCCCACGGCCGGTTCGTGGAGATCGCGGAGGGCC GCAAGCTACGGCTGGTCTGCGAAGGGCCGGCTGAATCCGCCCCCGCGATCTGGATGGAGCACGGCGCCTTCGGCAGCGCG ACGGACTGGGCGGCGATCCAGCAGAAGCTGACGGCCAGGGGCCTGCGCTCGTGCGCCTACGACCGGGCGGGCCTCGGCTT CTCGGACCCCGGCCCGCGGCCGCGCGACGGGGACGCGGCCCTGGCCGACCTTGAGGCTCTGATGGCGGCCGAGGGCGTCA CGGGACCGGTCGTCCTGGCGGGACATTCCATGGCCGGCCTGCACCTGCGCCGGTTCGCGGCCGAGCATCCGGACCGGGTC GCCGGCCTCGTGCTGGTCGACGCCACGACGCCCGAGAGCATCGACGATCCCCGCGTGCGGCGGTTCGTGGGGGTGTTCAA GGCGGTGGCGCGCCTGGGCGCGTTCGCCGGCACGACGGGACTGATCAAGCCCTTCTACTACCTGGGCGAACGGATCGGCC TTCCGGAGGCGCGGGTGGCCGAGAAGCGGCGGATCTTCGTCTCGGGCCGCCACATGCGCGAGGCCGCCGCCGAGGGGCTG CAGTGGGAGCGCGCCGCCCGGCAGGCGATCGCCGCCGGCCCGCTGCCGCCCGGCCTGCCGGTCGCGGTCGTGGTCGCGGG GGATCGCCGGCAGGACAGTCCCCGCGCCGCCCCGGCCAGCCAGTCGCGGCACGGCTACTTCGAGGCGGTCCCCGAGGCCA CCCACACCAGCATCCTGGGCCTGACCCACGGCGAGGCCGTAGTGCGGGGGATCGAGCACGTCCTGGCGGCCAGCGGCCGA TGA
Upstream 100 bases:
>100_bases CGCGCAGGGCGCCGGCGCCGCGGAACTCGTTGAGGACGTCTTCGGTGTTCATGGACCCGGGAGATAGTCGCGTTTCGCCA GAGGCGGAAGATGCCAGCCG
Downstream 100 bases:
>100_bases AGCCGGGCGCCGACCCGTCCGCCCAGGATCCGTCCGCCAAGGGCGGCTTGCACGCCCTGCGCGGGGAATGGGCCAAGGCC GAGCCCCACCTGCGGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MQAGPCPRYDGRMVKVLIGLAVVLGAWLAAGFAIVAAAGDVTPHGRFVEIAEGRKLRLVCEGPAESAPAIWMEHGAFGSA TDWAAIQQKLTARGLRSCAYDRAGLGFSDPGPRPRDGDAALADLEALMAAEGVTGPVVLAGHSMAGLHLRRFAAEHPDRV AGLVLVDATTPESIDDPRVRRFVGVFKAVARLGAFAGTTGLIKPFYYLGERIGLPEARVAEKRRIFVSGRHMREAAAEGL QWERAARQAIAAGPLPPGLPVAVVVAGDRRQDSPRAAPASQSRHGYFEAVPEATHTSILGLTHGEAVVRGIEHVLAASGR
Sequences:
>Translated_320_residues MQAGPCPRYDGRMVKVLIGLAVVLGAWLAAGFAIVAAAGDVTPHGRFVEIAEGRKLRLVCEGPAESAPAIWMEHGAFGSA TDWAAIQQKLTARGLRSCAYDRAGLGFSDPGPRPRDGDAALADLEALMAAEGVTGPVVLAGHSMAGLHLRRFAAEHPDRV AGLVLVDATTPESIDDPRVRRFVGVFKAVARLGAFAGTTGLIKPFYYLGERIGLPEARVAEKRRIFVSGRHMREAAAEGL QWERAARQAIAAGPLPPGLPVAVVVAGDRRQDSPRAAPASQSRHGYFEAVPEATHTSILGLTHGEAVVRGIEHVLAASGR >Mature_320_residues MQAGPCPRYDGRMVKVLIGLAVVLGAWLAAGFAIVAAAGDVTPHGRFVEIAEGRKLRLVCEGPAESAPAIWMEHGAFGSA TDWAAIQQKLTARGLRSCAYDRAGLGFSDPGPRPRDGDAALADLEALMAAEGVTGPVVLAGHSMAGLHLRRFAAEHPDRV AGLVLVDATTPESIDDPRVRRFVGVFKAVARLGAFAGTTGLIKPFYYLGERIGLPEARVAEKRRIFVSGRHMREAAAEGL QWERAARQAIAAGPLPPGLPVAVVVAGDRRQDSPRAAPASQSRHGYFEAVPEATHTSILGLTHGEAVVRGIEHVLAASGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33715; Mature: 33715
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAGPCPRYDGRMVKVLIGLAVVLGAWLAAGFAIVAAAGDVTPHGRFVEIAEGRKLRLVC CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEE EGPAESAPAIWMEHGAFGSATDWAAIQQKLTARGLRSCAYDRAGLGFSDPGPRPRDGDAA CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH LADLEALMAAEGVTGPVVLAGHSMAGLHLRRFAAEHPDRVAGLVLVDATTPESIDDPRVR HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHH RFVGVFKAVARLGAFAGTTGLIKPFYYLGERIGLPEARVAEKRRIFVSGRHMREAAAEGL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCHHHHHHHHHCC QWERAARQAIAAGPLPPGLPVAVVVAGDRRQDSPRAAPASQSRHGYFEAVPEATHTSILG HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCHHHEEEE LTHGEAVVRGIEHVLAASGR CCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQAGPCPRYDGRMVKVLIGLAVVLGAWLAAGFAIVAAAGDVTPHGRFVEIAEGRKLRLVC CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEE EGPAESAPAIWMEHGAFGSATDWAAIQQKLTARGLRSCAYDRAGLGFSDPGPRPRDGDAA CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH LADLEALMAAEGVTGPVVLAGHSMAGLHLRRFAAEHPDRVAGLVLVDATTPESIDDPRVR HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHH RFVGVFKAVARLGAFAGTTGLIKPFYYLGERIGLPEARVAEKRRIFVSGRHMREAAAEGL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHEEEECCHHHHHHHHHCC QWERAARQAIAAGPLPPGLPVAVVVAGDRRQDSPRAAPASQSRHGYFEAVPEATHTSILG HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCHHHEEEE LTHGEAVVRGIEHVLAASGR CCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA