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The map label for this gene is recO

Identifier: 197105330

GI number: 197105330

Start: 2095389

End: 2096120

Strand: Reverse

Name: recO

Synonym: PHZ_c1867

Alternate gene names: 197105330

Gene position: 2096120-2095389 (Counterclockwise)

Preceding gene: 197105331

Following gene: 197105329

Centisome position: 52.45

GC content: 75.55

Gene sequence:

>732_bases
ATGGAATTCGAGGACGACGCCTTCGTGCTGGCCGCCCGCGCCCACGGCGAGACGGGCGCCATCGTCGAGCTGCTCACCTC
GGCCCACGGCAGGTACGCCGCCCACGTGGCCGGCGGCGCCTCGCGCAAGGTGCGGCCCTTCCTGCAGCCGGGCGCGCGGG
TGATCGCCCGCTACCGCGCGCGGGTCTCGGACCAGCTCGGTTCGGCCGCCATCGAGCCGGTTGGGGAGGGGCCGGCGGCC
CTGTTCGACGATCCCCTGGCGCTGTCGGGCCTTTCGGCCGCCGCCGCGGTCGCCGCGGGCGCGCTGCCCGAGCGCGAGCC
GCATCCGGGCGCCTTCCTAGCCTTCGAGGCGCTGACCGGCGCGCTGACCCATCCGGACGTCTGGCCCGCGGTCTTCGTCC
GCTTCGAGGCGGGGCTGCTGCAGGACCTGGGCTTCGGCCTCGACCTCTCAAAGTGCGCCGCCACCGGGATCACCGACGAT
CTCGTCTGGGTCAGCCCGCGCACCGGCCGCGCCGTCAGCCGCCAGGCGGGCGAGCCCTACAAGGACCGCCTGCTGGCGCT
GCCGCCATTCCTGCTCTCGGCCCAGGGCGGCCTGCGCGCCGGCGACGTCGCCGCCGGCCTGGCGCTCACCGGCCACTTCC
TGGAGGCCTTCATCTTCGGCCCCTTGAACCGGCCCCTGCCGCCCGCGCGCCTCTGGCTCCTCGACCGCCTCTCCGAAGCG
GGACGGCTGTAG

Upstream 100 bases:

>100_bases
TCCTGGACGCCGGCGGGATCGAACGGGTCCTGCGCGAGGTGTTCGGCCTGCCGGTCGAACCGTCGTGGCGGCCGCTCATC
GAAGCGGCCGCGGCCCGCTG

Downstream 100 bases:

>100_bases
TTTCCCTCGACTTGTCATCCCGGTTTCGCCGGAGGCGAAGACCGGGACCCATATGCGCTGACCGCAGGGGCTTGCCTCCA
GTCGAGAACGCCGTTATCTG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MEFEDDAFVLAARAHGETGAIVELLTSAHGRYAAHVAGGASRKVRPFLQPGARVIARYRARVSDQLGSAAIEPVGEGPAA
LFDDPLALSGLSAAAAVAAGALPEREPHPGAFLAFEALTGALTHPDVWPAVFVRFEAGLLQDLGFGLDLSKCAATGITDD
LVWVSPRTGRAVSRQAGEPYKDRLLALPPFLLSAQGGLRAGDVAAGLALTGHFLEAFIFGPLNRPLPPARLWLLDRLSEA
GRL

Sequences:

>Translated_243_residues
MEFEDDAFVLAARAHGETGAIVELLTSAHGRYAAHVAGGASRKVRPFLQPGARVIARYRARVSDQLGSAAIEPVGEGPAA
LFDDPLALSGLSAAAAVAAGALPEREPHPGAFLAFEALTGALTHPDVWPAVFVRFEAGLLQDLGFGLDLSKCAATGITDD
LVWVSPRTGRAVSRQAGEPYKDRLLALPPFLLSAQGGLRAGDVAAGLALTGHFLEAFIFGPLNRPLPPARLWLLDRLSEA
GRL
>Mature_243_residues
MEFEDDAFVLAARAHGETGAIVELLTSAHGRYAAHVAGGASRKVRPFLQPGARVIARYRARVSDQLGSAAIEPVGEGPAA
LFDDPLALSGLSAAAAVAAGALPEREPHPGAFLAFEALTGALTHPDVWPAVFVRFEAGLLQDLGFGLDLSKCAATGITDD
LVWVSPRTGRAVSRQAGEPYKDRLLALPPFLLSAQGGLRAGDVAAGLALTGHFLEAFIFGPLNRPLPPARLWLLDRLSEA
GRL

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_PHEZH (B4RCU1)

Other databases:

- EMBL:   CP000747
- RefSeq:   YP_002130707.1
- GeneID:   6791382
- GenomeReviews:   CP000747_GR
- KEGG:   pzu:PHZ_c1867
- HOGENOM:   HBG474229
- OMA:   PERDPHP
- ProtClustDB:   PRK00085
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 25457; Mature: 25457

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFEDDAFVLAARAHGETGAIVELLTSAHGRYAAHVAGGASRKVRPFLQPGARVIARYRA
CCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
RVSDQLGSAAIEPVGEGPAALFDDPLALSGLSAAAAVAAGALPEREPHPGAFLAFEALTG
HHHHHHCCHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHC
ALTHPDVWPAVFVRFEAGLLQDLGFGLDLSKCAATGITDDLVWVSPRTGRAVSRQAGEPY
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHCCCCH
KDRLLALPPFLLSAQGGLRAGDVAAGLALTGHFLEAFIFGPLNRPLPPARLWLLDRLSEA
HHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
GRL
CCC
>Mature Secondary Structure
MEFEDDAFVLAARAHGETGAIVELLTSAHGRYAAHVAGGASRKVRPFLQPGARVIARYRA
CCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
RVSDQLGSAAIEPVGEGPAALFDDPLALSGLSAAAAVAAGALPEREPHPGAFLAFEALTG
HHHHHHCCHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHC
ALTHPDVWPAVFVRFEAGLLQDLGFGLDLSKCAATGITDDLVWVSPRTGRAVSRQAGEPY
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHCCCCH
KDRLLALPPFLLSAQGGLRAGDVAAGLALTGHFLEAFIFGPLNRPLPPARLWLLDRLSEA
HHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
GRL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA