| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105321
Identifier: 197105321
GI number: 197105321
Start: 2082430
End: 2083668
Strand: Direct
Name: 197105321
Synonym: PHZ_c1858
Alternate gene names: NA
Gene position: 2082430-2083668 (Clockwise)
Preceding gene: 197105319
Following gene: 197105322
Centisome position: 52.11
GC content: 70.94
Gene sequence:
>1239_bases GTGGGCGGGACGGTCCTCACGGCCACCGGCCAGCGGATCGAGAACGGCATGGTGCTGATCCGCGACGGCCGCATCGAGCG TGTCGGCCCGGCCGCCGAGCCGCCGGCCGGCTACGAGGTGGTCGACGCCCGCGGCCGCTGGGTGACGCCCGGCGTGATCG ACGCCCACTCGCACATGGGCGTCTACCCTTCTCCCGGCGTGCAGGCGCACTCGGACGGCAACGAGATCACCGACCCCAAC ACCGCCCAGGTGTGGGCCGAGCACTCGGTCTGGCCGCAGGACCCCAACTTCAACCTGGCGCGCGCCGGCGGCGTGACGAC GGTCCACATCCTGCCCGGCTCGGCGAACCTTTTCGGCGGGCGCGGCGTCACCCTGCGCAACGTGCCGGCCCGCACGACCC AGGCGATGAAGTTCCCCGGGGCGCCCTACACGCTGAAGATGGCGTGCGGCGAGAACCCCAAGCGTGTCTATGGCGGCCGC AACCGCTCGCCCTCCACGCGGATGGGCAACGTCGCCGGCTACCGCGCCGCCTGGATCAACGCCGCCGACTACGGCCGCAA GTGGGACGCCTACCGCCGCAAGAGCGAGGACGGCGAGAAGGCCGATCCGCCGAAGCGCGACCTGCAGCTCGACACCCTGC TGGGCGTGTTGAAGGGCGACATCCTCGTCCAGAACCACTGCTATCGGGCCGACGAGATGGCCCAGATGATCGATGTGGCC GACGAGTTCGGCTACCGCATCACCTCGTTCCACCACACCACCGAGGGCTACAAGATCGCCGACGTGCTGGCCAAGCGCGA CATCTGCGCCGCCACCTGGGCGAACTGGTGGGGCGGCAAGCTGGAGCAGTTCGACGGCATCGAGGCCAACGCCGCGCTCG TCCACGCCGCCGGCGGCTGCGCGATCATCCATTCGGACGATCCCGACCTCATCCAGCGACTGAACCAGGAGGCCGCCGAG GCCCTGGCCGCCGGCCGCGACGCCGGCCTGCAGATCAGCGAGGCCGAGGCCATCGGCTGGATCACCGCCAACCCCGCCAA GGCGCTGGGCGTCCTGAAGGAGACCGGCACCCTGGAGCCCGGCAAGCGGGCCGACGTGGTCCTCTGGGACAAGAACCCCT TCTCGGTCTACGCCCGCGCCGAGCGCGTGTGGATCGACGGCGGCGTCGCCTACGACCGCCACGACCCGGCCTTCCAGGCC AAGTCGGACTTCGAGATCGGCCTGGGAGGCCTGCGATGA
Upstream 100 bases:
>100_bases CGCGCCGGCCGCCAAGTCGGCGCTGCCGAAGGGCCTGGAGGCCCGCGGCGACGTCTTCGCCAGCACCTACCAGCCCCTGC CCGGCCGCCCGACGGCCATC
Downstream 100 bases:
>100_bases GACGCCCGCTCGCCGCGCTCGCGGCCCTCTGCTCGCTCGCGGTCGCGGGGACCGCCGCGGCCGCCACCATCGCCGTCACC AATGCCCGGGTGCTGACCGC
Product: Imidazolonepropionase
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Imidazolonepropionase; Amidohydrolase Imidazolonepropionase; Imidazolonepropionase And Related Amidohydrolases; Dihydroorotase; Metallo-Dependent Hydrolase; Metal-Dependent Hydrolase Superfamily Protein; Amidohydrolase-Like Domain-Containing Protein; Amidohodrolase; Aminohydrolase; Secreted; N-Acetylglucosamine-6-Phosphate Deacetylase; Imidazolone-5-Propionate Hydrolase
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MGGTVLTATGQRIENGMVLIRDGRIERVGPAAEPPAGYEVVDARGRWVTPGVIDAHSHMGVYPSPGVQAHSDGNEITDPN TAQVWAEHSVWPQDPNFNLARAGGVTTVHILPGSANLFGGRGVTLRNVPARTTQAMKFPGAPYTLKMACGENPKRVYGGR NRSPSTRMGNVAGYRAAWINAADYGRKWDAYRRKSEDGEKADPPKRDLQLDTLLGVLKGDILVQNHCYRADEMAQMIDVA DEFGYRITSFHHTTEGYKIADVLAKRDICAATWANWWGGKLEQFDGIEANAALVHAAGGCAIIHSDDPDLIQRLNQEAAE ALAAGRDAGLQISEAEAIGWITANPAKALGVLKETGTLEPGKRADVVLWDKNPFSVYARAERVWIDGGVAYDRHDPAFQA KSDFEIGLGGLR
Sequences:
>Translated_412_residues MGGTVLTATGQRIENGMVLIRDGRIERVGPAAEPPAGYEVVDARGRWVTPGVIDAHSHMGVYPSPGVQAHSDGNEITDPN TAQVWAEHSVWPQDPNFNLARAGGVTTVHILPGSANLFGGRGVTLRNVPARTTQAMKFPGAPYTLKMACGENPKRVYGGR NRSPSTRMGNVAGYRAAWINAADYGRKWDAYRRKSEDGEKADPPKRDLQLDTLLGVLKGDILVQNHCYRADEMAQMIDVA DEFGYRITSFHHTTEGYKIADVLAKRDICAATWANWWGGKLEQFDGIEANAALVHAAGGCAIIHSDDPDLIQRLNQEAAE ALAAGRDAGLQISEAEAIGWITANPAKALGVLKETGTLEPGKRADVVLWDKNPFSVYARAERVWIDGGVAYDRHDPAFQA KSDFEIGLGGLR >Mature_411_residues GGTVLTATGQRIENGMVLIRDGRIERVGPAAEPPAGYEVVDARGRWVTPGVIDAHSHMGVYPSPGVQAHSDGNEITDPNT AQVWAEHSVWPQDPNFNLARAGGVTTVHILPGSANLFGGRGVTLRNVPARTTQAMKFPGAPYTLKMACGENPKRVYGGRN RSPSTRMGNVAGYRAAWINAADYGRKWDAYRRKSEDGEKADPPKRDLQLDTLLGVLKGDILVQNHCYRADEMAQMIDVAD EFGYRITSFHHTTEGYKIADVLAKRDICAATWANWWGGKLEQFDGIEANAALVHAAGGCAIIHSDDPDLIQRLNQEAAEA LAAGRDAGLQISEAEAIGWITANPAKALGVLKETGTLEPGKRADVVLWDKNPFSVYARAERVWIDGGVAYDRHDPAFQAK SDFEIGLGGLR
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44633; Mature: 44501
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGTVLTATGQRIENGMVLIRDGRIERVGPAAEPPAGYEVVDARGRWVTPGVIDAHSHMG CCCEEEEECCCCCCCCEEEEECCCEEECCCCCCCCCCCEEEECCCCEECCCEEECCCCCC VYPSPGVQAHSDGNEITDPNTAQVWAEHSVWPQDPNFNLARAGGVTTVHILPGSANLFGG CCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCEEECCCEEEEEEECCCCCEECC RGVTLRNVPARTTQAMKFPGAPYTLKMACGENPKRVYGGRNRSPSTRMGNVAGYRAAWIN CCEEEECCCCCCHHHEECCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEC AADYGRKWDAYRRKSEDGEKADPPKRDLQLDTLLGVLKGDILVQNHCYRADEMAQMIDVA HHHCCCCCHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHH DEFGYRITSFHHTTEGYKIADVLAKRDICAATWANWWGGKLEQFDGIEANAALVHAAGGC HHCCCEEEEEEECCCCEEHHHHHHHCCHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCE AIIHSDDPDLIQRLNQEAAEALAAGRDAGLQISEAEAIGWITANPAKALGVLKETGTLEP EEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCHHHHHHHHHHCCCCCC GKRADVVLWDKNPFSVYARAERVWIDGGVAYDRHDPAFQAKSDFEIGLGGLR CCCCCEEEECCCCCEEEEEEEEEEEECCEEECCCCCCCCCCCCCEECCCCCC >Mature Secondary Structure GGTVLTATGQRIENGMVLIRDGRIERVGPAAEPPAGYEVVDARGRWVTPGVIDAHSHMG CCEEEEECCCCCCCCEEEEECCCEEECCCCCCCCCCCEEEECCCCEECCCEEECCCCCC VYPSPGVQAHSDGNEITDPNTAQVWAEHSVWPQDPNFNLARAGGVTTVHILPGSANLFGG CCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCEEECCCEEEEEEECCCCCEECC RGVTLRNVPARTTQAMKFPGAPYTLKMACGENPKRVYGGRNRSPSTRMGNVAGYRAAWIN CCEEEECCCCCCHHHEECCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEC AADYGRKWDAYRRKSEDGEKADPPKRDLQLDTLLGVLKGDILVQNHCYRADEMAQMIDVA HHHCCCCCHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHH DEFGYRITSFHHTTEGYKIADVLAKRDICAATWANWWGGKLEQFDGIEANAALVHAAGGC HHCCCEEEEEEECCCCEEHHHHHHHCCHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCE AIIHSDDPDLIQRLNQEAAEALAAGRDAGLQISEAEAIGWITANPAKALGVLKETGTLEP EEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCHHHHHHHHHHCCCCCC GKRADVVLWDKNPFSVYARAERVWIDGGVAYDRHDPAFQAKSDFEIGLGGLR CCCCCEEEECCCCCEEEEEEEEEEEECCEEECCCCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA