| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is pyrG
Identifier: 197105214
GI number: 197105214
Start: 1959640
End: 1961280
Strand: Reverse
Name: pyrG
Synonym: PHZ_c1751
Alternate gene names: 197105214
Gene position: 1961280-1959640 (Counterclockwise)
Preceding gene: 197105215
Following gene: 197105212
Centisome position: 49.08
GC content: 67.89
Gene sequence:
>1641_bases ATGGCCCGGTACATCTTCATCACCGGCGGCGTGGTCTCCTCTCTTGGTAAAGGTCTCGCGTCCGCCGCGCTTGGCGCCCT GTTGCAGGCGCGCGGCTACAAGGTCCGTCTGAGGAAACTCGACCCCTATCTCAACGTCGATCCGGGGACGATGAGCCCCT ACCAGCACGGCGAGGTCTTCGTGACCGACGACGGGGCCGAGACCGACCTCGACCTCGGCCACTACGAGCGCTTCACGGGC GTCTCGGCCACCCGCGCCGACAACATCACGACGGGCCAGATCTACAAGACGATCATCGAGAAGGAGCGCCGCGGCGACTA CCTCGGCGCGACGGTCCAGGTCATTCCGCACGTCACCGGCGAGATCAAGGACTTCGTCCTCTCCGATCCCGGCCCGGATG TGGACTTCGTGCTGATCGAGGTCGGCGGCACGGTGGGCGACATCGAGGGCCTGCCGTTCTTCGAGGCGATCCGCCAGCTG GGCCAGGAGCTGCCCCGCGGGCACGCCTGCTACATCCACCTGACGCTGCTGCCGTTCATCAAGACGGCCGGCGAGATGAA GACCAAGCCGACCCAGCACTCGGTGAAGGAGCTGCGCTCGATCGGCATCCAGCCCGACATCCTGCTGTGCCGGACCGAGT TCCCGATCCCCGAGGGCGAGCGGCGCAAGATCGCCCAGTTCTGCAACGTGCGCCCCAGCGCCGTCATCCAGGCGATGGAC AGCGCCAACATCTACGCCGTGCCGTTGGACTATCACCACGAGGGACTCGACACCGAGGTGCTCGACGTCTTCGGCCTGCT GGACCAGGCGCCGAAGCCTGACCTGACCCGCTGGGAAGAGATCTCCCACCGCCTGAGCCACCCCGACGGCGAGGTGAACA TCGCCATCGTCGGCAAGTATACGGGCCTGACCGACGCCTACAAATCGCTGGTCGAGGCGCTGGTCCACGGCGGCGTGGCC AACAACGTCCGGGTCAAGTTCGACTGGATCGAGGGCGAGGCCTTCGAGAAGGACGAGGACCTGATCGCCGTGCGTCTGGC CAACGTCCACGGCGTGCTGGTCCCGGGGGCCTTCGGCGAGCGCGGCTCGGAGGGGATGATCCGGGCCGTCCAGTTCGCCC GCGAGCACCAGATCCCGTACTTCGGCATCTGCTTCGGCATGCAGATGGCGATGATCGAGGCGGCCCGGAACCTGGCCGGC ATCCGGCAAGCTTCGTCCACCGAGTTCGGCCCGACCTCCGAGCCCATCGTCGGCCTGATGACCGAGTGGACCCGGGGGAA CGAGAAGCAGGTCCGCGCCGAGGGGGGCGAGCTGGGCGGCACCATGCGCTGCGGCGCCTATGACGCCGTGCTGGCCCCCG GATCGCGGGTGGCCGAGATCTACGGCTCGACCGCCATCCAGGAGCGCCATCGCCACCGCTACGAGGTGAACATCGGCTAC CGCGAGCGGATCGAGGCCACGGGCCTGAAGTTCACCGGCCTGTCGCCCGACGGCCAGCTGCCCGAGATCTGCGAGCGGGC GGACCATCCCTGGTTCGTCGGCGTGCAGTACCACCCGGAGCTGAAGAGCCGGCCGTTCGACCCGCACCCGCTGTTCGCCA GCTTCATCGGCGCGGCCAAGGAGCGGAGCCGGCTGGTCTAG
Upstream 100 bases:
>100_bases TCCCCAAACGGCCCCCGCGCCCGCCGCGCCGCAGTAATCCGTGGATAGTTTGCACCACGGGGCGGGCCGCCCCGGCGAAT CACGGCTACTCTGAGCGCCC
Downstream 100 bases:
>100_bases GCCAGGCCCCTTTCGCGCAGCAGGGCCTCCTCGTCGCCCGACACCCAGCCGAAGATCCTGGGTCCCTCGTCGGTCAAGCG TACGAAGTAGGTCACCTCGA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTG VSATRADNITTGQIYKTIIEKERRGDYLGATVQVIPHVTGEIKDFVLSDPGPDVDFVLIEVGGTVGDIEGLPFFEAIRQL GQELPRGHACYIHLTLLPFIKTAGEMKTKPTQHSVKELRSIGIQPDILLCRTEFPIPEGERRKIAQFCNVRPSAVIQAMD SANIYAVPLDYHHEGLDTEVLDVFGLLDQAPKPDLTRWEEISHRLSHPDGEVNIAIVGKYTGLTDAYKSLVEALVHGGVA NNVRVKFDWIEGEAFEKDEDLIAVRLANVHGVLVPGAFGERGSEGMIRAVQFAREHQIPYFGICFGMQMAMIEAARNLAG IRQASSTEFGPTSEPIVGLMTEWTRGNEKQVRAEGGELGGTMRCGAYDAVLAPGSRVAEIYGSTAIQERHRHRYEVNIGY RERIEATGLKFTGLSPDGQLPEICERADHPWFVGVQYHPELKSRPFDPHPLFASFIGAAKERSRLV
Sequences:
>Translated_546_residues MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTG VSATRADNITTGQIYKTIIEKERRGDYLGATVQVIPHVTGEIKDFVLSDPGPDVDFVLIEVGGTVGDIEGLPFFEAIRQL GQELPRGHACYIHLTLLPFIKTAGEMKTKPTQHSVKELRSIGIQPDILLCRTEFPIPEGERRKIAQFCNVRPSAVIQAMD SANIYAVPLDYHHEGLDTEVLDVFGLLDQAPKPDLTRWEEISHRLSHPDGEVNIAIVGKYTGLTDAYKSLVEALVHGGVA NNVRVKFDWIEGEAFEKDEDLIAVRLANVHGVLVPGAFGERGSEGMIRAVQFAREHQIPYFGICFGMQMAMIEAARNLAG IRQASSTEFGPTSEPIVGLMTEWTRGNEKQVRAEGGELGGTMRCGAYDAVLAPGSRVAEIYGSTAIQERHRHRYEVNIGY RERIEATGLKFTGLSPDGQLPEICERADHPWFVGVQYHPELKSRPFDPHPLFASFIGAAKERSRLV >Mature_545_residues ARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGV SATRADNITTGQIYKTIIEKERRGDYLGATVQVIPHVTGEIKDFVLSDPGPDVDFVLIEVGGTVGDIEGLPFFEAIRQLG QELPRGHACYIHLTLLPFIKTAGEMKTKPTQHSVKELRSIGIQPDILLCRTEFPIPEGERRKIAQFCNVRPSAVIQAMDS ANIYAVPLDYHHEGLDTEVLDVFGLLDQAPKPDLTRWEEISHRLSHPDGEVNIAIVGKYTGLTDAYKSLVEALVHGGVAN NVRVKFDWIEGEAFEKDEDLIAVRLANVHGVLVPGAFGERGSEGMIRAVQFAREHQIPYFGICFGMQMAMIEAARNLAGI RQASSTEFGPTSEPIVGLMTEWTRGNEKQVRAEGGELGGTMRCGAYDAVLAPGSRVAEIYGSTAIQERHRHRYEVNIGYR ERIEATGLKFTGLSPDGQLPEICERADHPWFVGVQYHPELKSRPFDPHPLFASFIGAAKERSRLV
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=559, Percent_Identity=42.9338103756708, Blast_Score=468, Evalue=1e-132, Organism=Homo sapiens, GI28559085, Length=556, Percent_Identity=42.2661870503597, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI28559083, Length=556, Percent_Identity=42.2661870503597, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI221316689, Length=556, Percent_Identity=42.2661870503597, Blast_Score=449, Evalue=1e-126, Organism=Escherichia coli, GI1789142, Length=542, Percent_Identity=54.9815498154982, Blast_Score=569, Evalue=1e-163, Organism=Caenorhabditis elegans, GI25148299, Length=608, Percent_Identity=37.0065789473684, Blast_Score=391, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6322563, Length=569, Percent_Identity=40.9490333919156, Blast_Score=429, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6319432, Length=569, Percent_Identity=39.0158172231986, Blast_Score=414, Evalue=1e-116, Organism=Drosophila melanogaster, GI24664469, Length=562, Percent_Identity=45.1957295373665, Blast_Score=464, Evalue=1e-131, Organism=Drosophila melanogaster, GI21357815, Length=508, Percent_Identity=44.4881889763779, Blast_Score=399, Evalue=1e-111,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_PHEZH (B4RBW5)
Other databases:
- EMBL: CP000747 - RefSeq: YP_002130591.1 - ProteinModelPortal: B4RBW5 - GeneID: 6791264 - GenomeReviews: CP000747_GR - KEGG: pzu:PHZ_c1751 - HOGENOM: HBG597806 - OMA: TEWLRGN - ProtClustDB: PRK05380 - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 60178; Mature: 60047
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 384-384 ACT_SITE 518-518 ACT_SITE 520-520
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNVDPGTMSPYQHGEVF CCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGVSATRADNITTGQIYKTIIEKERRGDYLGATVQVIPHVTG EECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCC EIKDFVLSDPGPDVDFVLIEVGGTVGDIEGLPFFEAIRQLGQELPRGHACYIHLTLLPFI HHHHHEECCCCCCCEEEEEEECCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHH KTAGEMKTKPTQHSVKELRSIGIQPDILLCRTEFPIPEGERRKIAQFCNVRPSAVIQAMD HHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHC SANIYAVPLDYHHEGLDTEVLDVFGLLDQAPKPDLTRWEEISHRLSHPDGEVNIAIVGKY CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEC TGLTDAYKSLVEALVHGGVANNVRVKFDWIEGEAFEKDEDLIAVRLANVHGVLVPGAFGE CCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCEEEECCCCCC RGSEGMIRAVQFAREHQIPYFGICFGMQMAMIEAARNLAGIRQASSTEFGPTSEPIVGLM CCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH TEWTRGNEKQVRAEGGELGGTMRCGAYDAVLAPGSRVAEIYGSTAIQERHRHRYEVNIGY HHHCCCCCCEEECCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCEEEEECCH RERIEATGLKFTGLSPDGQLPEICERADHPWFVGVQYHPELKSRPFDPHPLFASFIGAAK HHHHHHCCEEEECCCCCCCCHHHHHHCCCCEEEEEEECCHHCCCCCCCCHHHHHHHHHHH ERSRLV HHHCCC >Mature Secondary Structure ARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNVDPGTMSPYQHGEVF CEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGVSATRADNITTGQIYKTIIEKERRGDYLGATVQVIPHVTG EECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCC EIKDFVLSDPGPDVDFVLIEVGGTVGDIEGLPFFEAIRQLGQELPRGHACYIHLTLLPFI HHHHHEECCCCCCCEEEEEEECCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHH KTAGEMKTKPTQHSVKELRSIGIQPDILLCRTEFPIPEGERRKIAQFCNVRPSAVIQAMD HHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHC SANIYAVPLDYHHEGLDTEVLDVFGLLDQAPKPDLTRWEEISHRLSHPDGEVNIAIVGKY CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEC TGLTDAYKSLVEALVHGGVANNVRVKFDWIEGEAFEKDEDLIAVRLANVHGVLVPGAFGE CCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCEEEECCCCCC RGSEGMIRAVQFAREHQIPYFGICFGMQMAMIEAARNLAGIRQASSTEFGPTSEPIVGLM CCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH TEWTRGNEKQVRAEGGELGGTMRCGAYDAVLAPGSRVAEIYGSTAIQERHRHRYEVNIGY HHHCCCCCCEEECCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCEEEEECCH RERIEATGLKFTGLSPDGQLPEICERADHPWFVGVQYHPELKSRPFDPHPLFASFIGAAK HHHHHHCCEEEECCCCCCCCHHHHHHCCCCEEEEEEECCHHCCCCCCCCHHHHHHHHHHH ERSRLV HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA