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The map label for this gene is glnL [H]

Identifier: 197105194

GI number: 197105194

Start: 1939390

End: 1940508

Strand: Reverse

Name: glnL [H]

Synonym: PHZ_c1731

Alternate gene names: 197105194

Gene position: 1940508-1939390 (Counterclockwise)

Preceding gene: 197105195

Following gene: 197105193

Centisome position: 48.56

GC content: 73.19

Gene sequence:

>1119_bases
ATGAACGGAAACACGAGGACGCACCCCAAGGGGATAGATCCCGACGCCCTGAAGGCGGCGGCGTTCGACCTCAGTCCCGA
CCCTTCGCTGGTGGTCAGCGCCGACGGCGCGCTGGTGGCGGTCAACGAGGCGGCCGAGGCGCTGTTCGGCCAGGGCCTGG
GTCTGCTGGCCCGAGGGCGCTTCCGCGCCGCCCTGCCGCCGGGCTCGGCGCTGGTCTCGCTGCTGAACCGGGCCATCGAC
GAGGGCGCCCGGGTTCGGGAGCGCGGCGTGCATATCAGCCTGTTCGGCCTGCCGGCGTTCGAGGCCGACGGCGCGGCGGC
CCCGCTCGGCGACGGCTCGGTCCTGCTGACCCTGACCGTCAAGACGGGCCTGGGCGTCGAGCGCGGCCCGCAGGAGGCGG
CGGGGCTGCGCTCGCTGGTGGGCCTCGGCCGCATGCTGGCGCACGAGATCAAGAACCCGTTGGCGGGCATCCGCGGCGCG
GCCCAGCTGCTGAAGGCCGGCGCCAAGGCCGAGGACGCGCCCCTGGCTCAATTGATCGTCGACGAGACCGACCGCGTCCG
GCGGCTCGTGGACCGCATGGAGGCGTTCTCGGACGACGCGCTGCCGTCGCTGAGCCCGCTCAACATCCACCAGATCCTCG
ACCGGGTGCGGGCGCTGGCCGCCAACGGCGTGGCCGACGGCCTGACGCTGAAGGAGAAGTACGACCCCTCGCTGCCGCCG
GTGCTCGGCGACGAGGACCAGCTGATCCAGGTCTTCCTGAACCTCGTGAAGAACGCCGCCGAGGCGGCCCACGCCCGCGG
CGACGGCCGCGGCGAGATCTCGATCCACACCGCCTACCGCCATGGCGTGCGGGTGCGCTCGGCGAGCGGCCAGTCCCTGC
GAGGGGCGCCGCTCGAGGTCCGCATCCAGGACAACGGCCCCGGCGTGCCCGAGCACATCCGCGAGAGCCTGTTCCAGCCC
TTCGTCAGCTCCAAGGCGAACGGGGCCGGGCTGGGCCTCGCTCTGGTCGCCAAGCTGGTCGCCGGCCACGGCGGCCTGAT
CGATTTCGAATCCGAGCCGGGCCGCACCGTCTTCCGGGTGCTGCTCCCCATCGCCGCGCCCGAGGACCTGCCCGCATGA

Upstream 100 bases:

>100_bases
CCAGGCGAGAAGCGCGCGCGGCCCTGTGCCGCCTGGAGGACGCCTCTGAAGTGGAGCGGGGCCTGAAGGCCCTGTGGGGC
GCTTCGGAGAGATTGGCGGC

Downstream 100 bases:

>100_bases
ACGCCGCGTCGAAGAAGATCCTGATCGCCGACGACGATTCCTCGATCCGGCTCGTGCTCAGCCAGGCGTTCACGCGGCTG
GGCTACCAGGTCCGGGCCAC

Product: nitrogen regulation protein NR(II)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MNGNTRTHPKGIDPDALKAAAFDLSPDPSLVVSADGALVAVNEAAEALFGQGLGLLARGRFRAALPPGSALVSLLNRAID
EGARVRERGVHISLFGLPAFEADGAAAPLGDGSVLLTLTVKTGLGVERGPQEAAGLRSLVGLGRMLAHEIKNPLAGIRGA
AQLLKAGAKAEDAPLAQLIVDETDRVRRLVDRMEAFSDDALPSLSPLNIHQILDRVRALAANGVADGLTLKEKYDPSLPP
VLGDEDQLIQVFLNLVKNAAEAAHARGDGRGEISIHTAYRHGVRVRSASGQSLRGAPLEVRIQDNGPGVPEHIRESLFQP
FVSSKANGAGLGLALVAKLVAGHGGLIDFESEPGRTVFRVLLPIAAPEDLPA

Sequences:

>Translated_372_residues
MNGNTRTHPKGIDPDALKAAAFDLSPDPSLVVSADGALVAVNEAAEALFGQGLGLLARGRFRAALPPGSALVSLLNRAID
EGARVRERGVHISLFGLPAFEADGAAAPLGDGSVLLTLTVKTGLGVERGPQEAAGLRSLVGLGRMLAHEIKNPLAGIRGA
AQLLKAGAKAEDAPLAQLIVDETDRVRRLVDRMEAFSDDALPSLSPLNIHQILDRVRALAANGVADGLTLKEKYDPSLPP
VLGDEDQLIQVFLNLVKNAAEAAHARGDGRGEISIHTAYRHGVRVRSASGQSLRGAPLEVRIQDNGPGVPEHIRESLFQP
FVSSKANGAGLGLALVAKLVAGHGGLIDFESEPGRTVFRVLLPIAAPEDLPA
>Mature_372_residues
MNGNTRTHPKGIDPDALKAAAFDLSPDPSLVVSADGALVAVNEAAEALFGQGLGLLARGRFRAALPPGSALVSLLNRAID
EGARVRERGVHISLFGLPAFEADGAAAPLGDGSVLLTLTVKTGLGVERGPQEAAGLRSLVGLGRMLAHEIKNPLAGIRGA
AQLLKAGAKAEDAPLAQLIVDETDRVRRLVDRMEAFSDDALPSLSPLNIHQILDRVRALAANGVADGLTLKEKYDPSLPP
VLGDEDQLIQVFLNLVKNAAEAAHARGDGRGEISIHTAYRHGVRVRSASGQSLRGAPLEVRIQDNGPGVPEHIRESLFQP
FVSSKANGAGLGLALVAKLVAGHGGLIDFESEPGRTVFRVLLPIAAPEDLPA

Specific function: NtrB acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC. In nitrogen limitation ntrB activates ntrC by phosphorylating it, while in nitrogen excess ntrC is dephosphorylated and consequently inactiva

COG id: COG3852

COG function: function code T; Signal transduction histidine kinase, nitrogen specific

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1790300, Length=352, Percent_Identity=34.9431818181818, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1790436, Length=233, Percent_Identity=30.4721030042918, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788549, Length=235, Percent_Identity=30.2127659574468, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789149, Length=244, Percent_Identity=31.5573770491803, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1786837, Length=380, Percent_Identity=24.2105263157895, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 38787; Mature: 38787

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGNTRTHPKGIDPDALKAAAFDLSPDPSLVVSADGALVAVNEAAEALFGQGLGLLARGR
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEHHHHHHHHHHCCCCHHHCCC
FRAALPPGSALVSLLNRAIDEGARVRERGVHISLFGLPAFEADGAAAPLGDGSVLLTLTV
EEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
KTGLGVERGPQEAAGLRSLVGLGRMLAHEIKNPLAGIRGAAQLLKAGAKAEDAPLAQLIV
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
DETDRVRRLVDRMEAFSDDALPSLSPLNIHQILDRVRALAANGVADGLTLKEKYDPSLPP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCC
VLGDEDQLIQVFLNLVKNAAEAAHARGDGRGEISIHTAYRHGVRVRSASGQSLRGAPLEV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCEEEECCCCCCCCCCCEEE
RIQDNGPGVPEHIRESLFQPFVSSKANGAGLGLALVAKLVAGHGGLIDFESEPGRTVFRV
EECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHH
LLPIAAPEDLPA
HHHHCCCCCCCC
>Mature Secondary Structure
MNGNTRTHPKGIDPDALKAAAFDLSPDPSLVVSADGALVAVNEAAEALFGQGLGLLARGR
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEHHHHHHHHHHCCCCHHHCCC
FRAALPPGSALVSLLNRAIDEGARVRERGVHISLFGLPAFEADGAAAPLGDGSVLLTLTV
EEECCCCHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
KTGLGVERGPQEAAGLRSLVGLGRMLAHEIKNPLAGIRGAAQLLKAGAKAEDAPLAQLIV
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
DETDRVRRLVDRMEAFSDDALPSLSPLNIHQILDRVRALAANGVADGLTLKEKYDPSLPP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCC
VLGDEDQLIQVFLNLVKNAAEAAHARGDGRGEISIHTAYRHGVRVRSASGQSLRGAPLEV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCEEEECCCCCCCCCCCEEE
RIQDNGPGVPEHIRESLFQPFVSSKANGAGLGLALVAKLVAGHGGLIDFESEPGRTVFRV
EECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHH
LLPIAAPEDLPA
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430; 2881918 [H]