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The map label for this gene is sufB [C]

Identifier: 197105183

GI number: 197105183

Start: 1927238

End: 1928707

Strand: Reverse

Name: sufB [C]

Synonym: PHZ_c1720

Alternate gene names: 197105183

Gene position: 1928707-1927238 (Counterclockwise)

Preceding gene: 197105184

Following gene: 197105182

Centisome position: 48.26

GC content: 66.6

Gene sequence:

>1470_bases
ATGGCCGCCGTCAAGCAGACCGTCGAGCAGGTCCAGAGTCTCGAGAAGTACAAGCACGGCTTCATCACCGAGATCGACCA
GGAGTTCGCGCCCAAGGGCCTGAACGAAGACATCGTCCGCTTCATCTCGGCCAAGAAGGACGAGCCGGAGTGGATGCTGG
AATGGCGGCTGGAGGCCTTCCGCCGCTGGCAGGCGCTGGAGGAGCCGGCGTGGGCGAAGGTCAGCTTCCCGCGTATCGAC
TACCAGGACGCCCACTACTACGCCGCGCCGAAGCAGAAGGCCGGGCCGAAGAGCCTCGACGAGGTCGATCCCGAGCTGCT
CGAGACCTACAAGAAGCTGGGCATCCCGCTGAGGGAGCAGGAGGTCCTGGCGGGGGTCGAGGGCGCGCCGCGCTACGCTG
TGGACGCGGTGTTCGACAGCGTCTCGGTCGTGACCACGTTCAAGAAGGAGCTGGCCGCCGCGGGCGTCATCTTCTGCTCG
ATGAGCGAGGCGATCCGCGACCATGGCGACCTGGTGCGCCGCTACCTGGGCTCCGTGGTGCCGGTCAGCGACAACTACTT
CGCCTGCCTGAACTCGGCGGTCTTCTCGGACGGCAGCTTCGTCTACGTGCCGCCGGGCGTGCGCTGCCCGATGGAGCTGT
CCACCTATTTCCGGATCAACGCCGAGAACTCGGGCCAGTTCGAGCGGACGCTGATCATCGCCGACGCCGGATCCTACGTC
TCGTACCTGGAGGGCTGCACGGCCCCCATGCGCGACGAGAACCAGCTGCACGCCGCCGTGGTCGAGCTGGTCGCCATGGA
CGACGCCGAGATCAAGTACTCCACCGTCCAGAACTGGTATCCGGGCGATCCCGAGACCGGGAAGGGCGGCATCTACAACT
TCGTGACCAAGCGGGCCGACTGCCGCGGCGACCGCTCGAAGGTGTCGTGGACCCAGGTCGAGACCGGCTCGTCCATCACC
TGGAAGTACCCCTCCTGCGTGCTGCGCGGGAACGGGAGCGTCGGCGAGTTCTACTCGATCGCCATCACCAACGGCCGCCA
ACAGGCCGACACCGGCACCAAGATGATCCACCTGGGCGCGAACACGCGCTCGCGGATCATCTCGAAGGGCATCAGCGCCG
GGAAGAGCAGCAACACCTACCGCGGGCTCGTCTCGGCGCACCCGAAGGCCAAGGGCGCGCGCAACTTCACCCAGTGCGAC
AGCCTGCTCATCGGCAAGCGCTGCGCGGCCCACACGGTGCCCTACATCGAGGCGCGCAACGGCCAGGCGGTGTTCGAGCA
CGAGGCGACCACCACGCGCCTCTCCGAGGACCAGCTCTTCTACGCCATGCAGCGCGGCCTTTCCCAGGAGGAGGCGGTGC
AGCTGCTCGTGAACGGCTTCGTCAGGGACGTGCTGCAGGAGCTCCCGATGGAGTTCGCCGTCGAGGCCCAGAAGCTGGTG
GCCATTTCGCTGGAAGGAAGTGTCGGCTGA

Upstream 100 bases:

>100_bases
GCGGCGGCTGGAACACCACGGAGGCCGACTGGAACAGGTTCGCCGACGTGTGGTTCGAGGCCTATCAGCGGTTCGCCGCG
CGCCGGAAGGAGGTCGCCTG

Downstream 100 bases:

>100_bases
TGTTGTCCGTGAAGAACCTGCACGCCGCGGTCGAGGACAAGGAGATCCTCAAGGGCCTCTCGCTCGAGGTGCCCGCCGGC
GAGGTGCACGCCATCATGGG

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MAAVKQTVEQVQSLEKYKHGFITEIDQEFAPKGLNEDIVRFISAKKDEPEWMLEWRLEAFRRWQALEEPAWAKVSFPRID
YQDAHYYAAPKQKAGPKSLDEVDPELLETYKKLGIPLREQEVLAGVEGAPRYAVDAVFDSVSVVTTFKKELAAAGVIFCS
MSEAIRDHGDLVRRYLGSVVPVSDNYFACLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENSGQFERTLIIADAGSYV
SYLEGCTAPMRDENQLHAAVVELVAMDDAEIKYSTVQNWYPGDPETGKGGIYNFVTKRADCRGDRSKVSWTQVETGSSIT
WKYPSCVLRGNGSVGEFYSIAITNGRQQADTGTKMIHLGANTRSRIISKGISAGKSSNTYRGLVSAHPKAKGARNFTQCD
SLLIGKRCAAHTVPYIEARNGQAVFEHEATTTRLSEDQLFYAMQRGLSQEEAVQLLVNGFVRDVLQELPMEFAVEAQKLV
AISLEGSVG

Sequences:

>Translated_489_residues
MAAVKQTVEQVQSLEKYKHGFITEIDQEFAPKGLNEDIVRFISAKKDEPEWMLEWRLEAFRRWQALEEPAWAKVSFPRID
YQDAHYYAAPKQKAGPKSLDEVDPELLETYKKLGIPLREQEVLAGVEGAPRYAVDAVFDSVSVVTTFKKELAAAGVIFCS
MSEAIRDHGDLVRRYLGSVVPVSDNYFACLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENSGQFERTLIIADAGSYV
SYLEGCTAPMRDENQLHAAVVELVAMDDAEIKYSTVQNWYPGDPETGKGGIYNFVTKRADCRGDRSKVSWTQVETGSSIT
WKYPSCVLRGNGSVGEFYSIAITNGRQQADTGTKMIHLGANTRSRIISKGISAGKSSNTYRGLVSAHPKAKGARNFTQCD
SLLIGKRCAAHTVPYIEARNGQAVFEHEATTTRLSEDQLFYAMQRGLSQEEAVQLLVNGFVRDVLQELPMEFAVEAQKLV
AISLEGSVG
>Mature_488_residues
AAVKQTVEQVQSLEKYKHGFITEIDQEFAPKGLNEDIVRFISAKKDEPEWMLEWRLEAFRRWQALEEPAWAKVSFPRIDY
QDAHYYAAPKQKAGPKSLDEVDPELLETYKKLGIPLREQEVLAGVEGAPRYAVDAVFDSVSVVTTFKKELAAAGVIFCSM
SEAIRDHGDLVRRYLGSVVPVSDNYFACLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENSGQFERTLIIADAGSYVS
YLEGCTAPMRDENQLHAAVVELVAMDDAEIKYSTVQNWYPGDPETGKGGIYNFVTKRADCRGDRSKVSWTQVETGSSITW
KYPSCVLRGNGSVGEFYSIAITNGRQQADTGTKMIHLGANTRSRIISKGISAGKSSNTYRGLVSAHPKAKGARNFTQCDS
LLIGKRCAAHTVPYIEARNGQAVFEHEATTTRLSEDQLFYAMQRGLSQEEAVQLLVNGFVRDVLQELPMEFAVEAQKLVA
ISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=489, Percent_Identity=60.5316973415133, Blast_Score=635, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 54249; Mature: 54118

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVKQTVEQVQSLEKYKHGFITEIDQEFAPKGLNEDIVRFISAKKDEPEWMLEWRLEAF
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHH
RRWQALEEPAWAKVSFPRIDYQDAHYYAAPKQKAGPKSLDEVDPELLETYKKLGIPLREQ
HHHHHHCCCCCCEEECCCCCCCCCCEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHH
EVLAGVEGAPRYAVDAVFDSVSVVTTFKKELAAAGVIFCSMSEAIRDHGDLVRRYLGSVV
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
PVSDNYFACLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENSGQFERTLIIADAGSYV
CCCCCHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCHHH
SYLEGCTAPMRDENQLHAAVVELVAMDDAEIKYSTVQNWYPGDPETGKGGIYNFVTKRAD
HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCCCHHHHHHHHHC
CRGDRSKVSWTQVETGSSITWKYPSCVLRGNGSVGEFYSIAITNGRQQADTGTKMIHLGA
CCCCCCCCEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECC
NTRSRIISKGISAGKSSNTYRGLVSAHPKAKGARNFTQCDSLLIGKRCAAHTVPYIEARN
CHHHHHHHHHHCCCCCCCCEECHHCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCEEECCC
GQAVFEHEATTTRLSEDQLFYAMQRGLSQEEAVQLLVNGFVRDVLQELPMEFAVEAQKLV
CCEEEECCCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEE
AISLEGSVG
EEEECCCCC
>Mature Secondary Structure 
AAVKQTVEQVQSLEKYKHGFITEIDQEFAPKGLNEDIVRFISAKKDEPEWMLEWRLEAF
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHH
RRWQALEEPAWAKVSFPRIDYQDAHYYAAPKQKAGPKSLDEVDPELLETYKKLGIPLREQ
HHHHHHCCCCCCEEECCCCCCCCCCEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHH
EVLAGVEGAPRYAVDAVFDSVSVVTTFKKELAAAGVIFCSMSEAIRDHGDLVRRYLGSVV
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
PVSDNYFACLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENSGQFERTLIIADAGSYV
CCCCCHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEEEECCHHH
SYLEGCTAPMRDENQLHAAVVELVAMDDAEIKYSTVQNWYPGDPETGKGGIYNFVTKRAD
HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCCCHHHHHHHHHC
CRGDRSKVSWTQVETGSSITWKYPSCVLRGNGSVGEFYSIAITNGRQQADTGTKMIHLGA
CCCCCCCCEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECC
NTRSRIISKGISAGKSSNTYRGLVSAHPKAKGARNFTQCDSLLIGKRCAAHTVPYIEARN
CHHHHHHHHHHCCCCCCCCEECHHCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCEEECCC
GQAVFEHEATTTRLSEDQLFYAMQRGLSQEEAVQLLVNGFVRDVLQELPMEFAVEAQKLV
CCEEEECCCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEE
AISLEGSVG
EEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]