| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is rhlE [H]
Identifier: 197105174
GI number: 197105174
Start: 1919584
End: 1921125
Strand: Direct
Name: rhlE [H]
Synonym: PHZ_c1711
Alternate gene names: 197105174
Gene position: 1919584-1921125 (Clockwise)
Preceding gene: 197105173
Following gene: 197105175
Centisome position: 48.03
GC content: 70.62
Gene sequence:
>1542_bases ATGACCGAATTTTCCGATCTTGGGCTATCGCCCGCGACCCTGAAGGCCGTCGCCGAGACGGGCTACACCACCGCTACGCC GATCCAAGCCGAAGCCATTCCCATGGCGCTGCAGGGCCGCGACGTCCTGGGCATCGCCCAGACCGGCACCGGCAAGACGG CGGCTTTCACCCTGCCGATGATCGACCGGCTGGCCGCCGGCCGCGCCAAGGCGCGCATGCCGCGGGCCCTCGTCATCGCC CCCACCCGCGAGCTCGCGGACCAGGTCTCGGCCTCGTTCGAGAAGTACGCCATGGGTCAGAAGCTGACCTGGGCGCTGCT GATCGGCGGCGTCTCGTTCAAGGACCAGGAACAGAAGCTGGACCGCGGCGTCGACGTGCTGATCGCCACGCCCGGCCGCC TCCTCGACCACTTCGAGCGGGGCAAGCTGCTGATGACCGGCGTGCAGATCATGGTGGTCGACGAAGCCGACCGCATGCTC GACATGGGCTTCATCCCGGACCTCGAGCGCATCTTCAAGCTGACCCCCGCCAAGAAGCAGACGCTGTTCTTCTCGGCCAC CATGCCGCCCGAGATCACGCGCCTCACCAAGCAGTTCCTGAACGATCCGGTGCGGATCGAGGCCTCGCGCCCGGCCACCA CGGCCGAGACCATCACCCAGTACCTCGTCCGCATCCCCAGCGCCGATCCGAAGGCCAAGCGGACCGCGCTGCGCGAGCTG ATCGGTCGCGCCGAGATCAACAACGGCATCGTCTTCTGCAACCGCAAGACGGAAGTCGACATCGTCGCCAAGTCGCTGAA GAAGCACGGCTTCGACGCCGCGGCGATCCACGGCGACCTCGACCAGGCCACCCGCATGCGGACGCTTGAGAGCTTCCGCA ACGGCGAGCTGAAGCTGCTCTGCGCCTCGGACGTGGCCGCCCGGGGGCTCGACATTCCCGCCGTCAGCCACGTCTTCAAC TTCGACGTGCCGCACCACGCCGACGACTACGTCCACCGGATCGGCCGCACCGGCCGCGCGGGCCGGACGGGCGAGGCGTT CATGATCGTCACGCCGGCCGACTCCAAGAACCTGGACAAGGTCCTGAAGCTGATCGGCAAGACTCCCGAAGAGGTCAGCC TCGACCTCGACTGGGCGAACATCAAGGACGAGCCCCGCCCTGGGCGGGGACGCGAACGCGGCGGCCGCGAGCGCAAGCGC AAGCCGCGCGAGGCCCGCGAACCGCGGCCGAGGCGCGAGAAGGCCGAGGCGGCGCCCGCGCCGGCTGCAGAGCCGGCGGC CCAGCCCCAGCCCGCACCCCGGCCCGCACGCGAGCGCCCCGCCGAGGAGTCCCGCCCCGCCCGGGCCGAACGTCCCGCGC GCGAACGGCCTGAACGTGAACGGTCGGAACGTGAACGGCCCCAACGCGAGCGCCCCGAGCGCGAGCGTGCGGAGGCCCAG GACCGCCGCCGCGGCCGCGACGACGGCGACCGGGTCGTGGGCTTCGGCTCCGACGTGCCGGCGTTCCTGCAGCGTCCGCC GCCGCGCTCGACCAAGGATTGA
Upstream 100 bases:
>100_bases AGCCGTCGCACCGTATGTTCCGCGCGCGCGGCGATGTCCGCCTGCGCCGCAGCGTTGCGCCTGGCTGCTTCCTCGGCCGG CGCCGCACCACCGGTAACTG
Downstream 100 bases:
>100_bases GATCTTCCGATCCGGCCGCGCCCGTCTTAACCGGGCGTTTGCCCGTCCTGGCCTAGGCTTCCCGCCGGCCGATGATGCGT CTCCAGGCTCATCGGCGGGG
Product: ATP-dependent RNA helicase, DEAD/DEAH box family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MTEFSDLGLSPATLKAVAETGYTTATPIQAEAIPMALQGRDVLGIAQTGTGKTAAFTLPMIDRLAAGRAKARMPRALVIA PTRELADQVSASFEKYAMGQKLTWALLIGGVSFKDQEQKLDRGVDVLIATPGRLLDHFERGKLLMTGVQIMVVDEADRML DMGFIPDLERIFKLTPAKKQTLFFSATMPPEITRLTKQFLNDPVRIEASRPATTAETITQYLVRIPSADPKAKRTALREL IGRAEINNGIVFCNRKTEVDIVAKSLKKHGFDAAAIHGDLDQATRMRTLESFRNGELKLLCASDVAARGLDIPAVSHVFN FDVPHHADDYVHRIGRTGRAGRTGEAFMIVTPADSKNLDKVLKLIGKTPEEVSLDLDWANIKDEPRPGRGRERGGRERKR KPREAREPRPRREKAEAAPAPAAEPAAQPQPAPRPARERPAEESRPARAERPARERPERERSERERPQRERPERERAEAQ DRRRGRDDGDRVVGFGSDVPAFLQRPPPRSTKD
Sequences:
>Translated_513_residues MTEFSDLGLSPATLKAVAETGYTTATPIQAEAIPMALQGRDVLGIAQTGTGKTAAFTLPMIDRLAAGRAKARMPRALVIA PTRELADQVSASFEKYAMGQKLTWALLIGGVSFKDQEQKLDRGVDVLIATPGRLLDHFERGKLLMTGVQIMVVDEADRML DMGFIPDLERIFKLTPAKKQTLFFSATMPPEITRLTKQFLNDPVRIEASRPATTAETITQYLVRIPSADPKAKRTALREL IGRAEINNGIVFCNRKTEVDIVAKSLKKHGFDAAAIHGDLDQATRMRTLESFRNGELKLLCASDVAARGLDIPAVSHVFN FDVPHHADDYVHRIGRTGRAGRTGEAFMIVTPADSKNLDKVLKLIGKTPEEVSLDLDWANIKDEPRPGRGRERGGRERKR KPREAREPRPRREKAEAAPAPAAEPAAQPQPAPRPARERPAEESRPARAERPARERPERERSERERPQRERPERERAEAQ DRRRGRDDGDRVVGFGSDVPAFLQRPPPRSTKD >Mature_512_residues TEFSDLGLSPATLKAVAETGYTTATPIQAEAIPMALQGRDVLGIAQTGTGKTAAFTLPMIDRLAAGRAKARMPRALVIAP TRELADQVSASFEKYAMGQKLTWALLIGGVSFKDQEQKLDRGVDVLIATPGRLLDHFERGKLLMTGVQIMVVDEADRMLD MGFIPDLERIFKLTPAKKQTLFFSATMPPEITRLTKQFLNDPVRIEASRPATTAETITQYLVRIPSADPKAKRTALRELI GRAEINNGIVFCNRKTEVDIVAKSLKKHGFDAAAIHGDLDQATRMRTLESFRNGELKLLCASDVAARGLDIPAVSHVFNF DVPHHADDYVHRIGRTGRAGRTGEAFMIVTPADSKNLDKVLKLIGKTPEEVSLDLDWANIKDEPRPGRGRERGGRERKRK PREAREPRPRREKAEAAPAPAAEPAAQPQPAPRPARERPAEESRPARAERPARERPERERSERERPQRERPERERAEAQD RRRGRDDGDRVVGFGSDVPAFLQRPPPRSTKD
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=365, Percent_Identity=40.2739726027397, Blast_Score=283, Evalue=4e-76, Organism=Homo sapiens, GI41327771, Length=401, Percent_Identity=36.4089775561097, Blast_Score=263, Evalue=4e-70, Organism=Homo sapiens, GI45446747, Length=377, Percent_Identity=35.2785145888594, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI45446743, Length=377, Percent_Identity=35.2785145888594, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI21071032, Length=406, Percent_Identity=37.192118226601, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI169881239, Length=418, Percent_Identity=37.0813397129187, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI13514809, Length=418, Percent_Identity=37.0813397129187, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI301171467, Length=392, Percent_Identity=37.5, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI87196351, Length=392, Percent_Identity=37.5, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI301171475, Length=392, Percent_Identity=37.5, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI224593278, Length=361, Percent_Identity=37.3961218836565, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI148613856, Length=373, Percent_Identity=37.2654155495979, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI38201710, Length=373, Percent_Identity=37.2654155495979, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI164664518, Length=391, Percent_Identity=36.3171355498721, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=38.135593220339, Blast_Score=245, Evalue=7e-65, Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=38.135593220339, Blast_Score=245, Evalue=9e-65, Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=38.135593220339, Blast_Score=245, Evalue=9e-65, Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=38.135593220339, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI4758138, Length=368, Percent_Identity=36.6847826086957, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI41327773, Length=390, Percent_Identity=33.8461538461538, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=33.7801608579088, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI41327776, Length=368, Percent_Identity=36.6847826086957, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI222352149, Length=367, Percent_Identity=34.6049046321526, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI31542656, Length=383, Percent_Identity=37.3368146214099, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI55749865, Length=402, Percent_Identity=33.3333333333333, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI50659095, Length=373, Percent_Identity=36.4611260053619, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI13129006, Length=384, Percent_Identity=34.8958333333333, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI188035877, Length=355, Percent_Identity=36.056338028169, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI13514831, Length=370, Percent_Identity=35.6756756756757, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI164419743, Length=365, Percent_Identity=34.2465753424658, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI51094101, Length=365, Percent_Identity=34.2465753424658, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI38327634, Length=394, Percent_Identity=34.7715736040609, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI83700235, Length=376, Percent_Identity=33.7765957446808, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI4503529, Length=376, Percent_Identity=33.5106382978723, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI21040371, Length=380, Percent_Identity=31.5789473684211, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI4758112, Length=363, Percent_Identity=31.9559228650138, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI18375623, Length=363, Percent_Identity=31.9559228650138, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI17505907, Length=417, Percent_Identity=30.2158273381295, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI8922886, Length=390, Percent_Identity=33.8461538461538, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI6005743, Length=390, Percent_Identity=33.0769230769231, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI41327779, Length=372, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=32.3119777158774, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI256223453, Length=368, Percent_Identity=29.8913043478261, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=32.3119777158774, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI62241022, Length=375, Percent_Identity=32.8, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI164419732, Length=363, Percent_Identity=31.404958677686, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI62241024, Length=352, Percent_Identity=33.2386363636364, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=27.6381909547739, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI4826686, Length=368, Percent_Identity=30.7065217391304, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI256773275, Length=394, Percent_Identity=30.4568527918782, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI9966805, Length=341, Percent_Identity=32.258064516129, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI20336298, Length=216, Percent_Identity=37.5, Blast_Score=139, Evalue=9e-33, Organism=Homo sapiens, GI154759257, Length=426, Percent_Identity=27.9342723004695, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI4557365, Length=369, Percent_Identity=25.2032520325203, Blast_Score=77, Evalue=6e-14, Organism=Escherichia coli, GI1787016, Length=367, Percent_Identity=46.3215258855586, Blast_Score=319, Evalue=2e-88, Organism=Escherichia coli, GI87082221, Length=381, Percent_Identity=42.7821522309711, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1790214, Length=412, Percent_Identity=38.8349514563107, Blast_Score=267, Evalue=1e-72, Organism=Escherichia coli, GI1787605, Length=376, Percent_Identity=39.3617021276596, Blast_Score=246, Evalue=4e-66, Organism=Escherichia coli, GI1788930, Length=367, Percent_Identity=41.41689373297, Blast_Score=237, Evalue=1e-63, Organism=Escherichia coli, GI48994977, Length=388, Percent_Identity=26.5463917525773, Blast_Score=97, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17555296, Length=372, Percent_Identity=38.4408602150538, Blast_Score=266, Evalue=2e-71, Organism=Caenorhabditis elegans, GI17510307, Length=364, Percent_Identity=41.4835164835165, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI17510309, Length=364, Percent_Identity=41.4835164835165, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI71995514, Length=364, Percent_Identity=41.4835164835165, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI71995718, Length=397, Percent_Identity=38.2871536523929, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI32565321, Length=383, Percent_Identity=37.597911227154, Blast_Score=257, Evalue=8e-69, Organism=Caenorhabditis elegans, GI71987143, Length=360, Percent_Identity=35.2777777777778, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI115533224, Length=405, Percent_Identity=37.037037037037, Blast_Score=244, Evalue=7e-65, Organism=Caenorhabditis elegans, GI71995724, Length=373, Percent_Identity=34.8525469168901, Blast_Score=241, Evalue=6e-64, Organism=Caenorhabditis elegans, GI17507121, Length=373, Percent_Identity=34.5844504021448, Blast_Score=241, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17510559, Length=384, Percent_Identity=35.4166666666667, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=37.9213483146067, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI17552642, Length=379, Percent_Identity=37.467018469657, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17552114, Length=360, Percent_Identity=35, Blast_Score=234, Evalue=8e-62, Organism=Caenorhabditis elegans, GI17537549, Length=378, Percent_Identity=33.8624338624339, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17507945, Length=344, Percent_Identity=37.5, Blast_Score=228, Evalue=8e-60, Organism=Caenorhabditis elegans, GI17507877, Length=400, Percent_Identity=35, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI71999644, Length=368, Percent_Identity=34.7826086956522, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=34.7826086956522, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI17507879, Length=386, Percent_Identity=34.4559585492228, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI17507881, Length=375, Percent_Identity=33.8666666666667, Blast_Score=213, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17509811, Length=358, Percent_Identity=33.5195530726257, Blast_Score=207, Evalue=8e-54, Organism=Caenorhabditis elegans, GI17505370, Length=390, Percent_Identity=33.8461538461538, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI115532548, Length=383, Percent_Identity=34.4647519582245, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI71982858, Length=365, Percent_Identity=32.8767123287671, Blast_Score=204, Evalue=8e-53, Organism=Caenorhabditis elegans, GI115532546, Length=385, Percent_Identity=34.2857142857143, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17508543, Length=378, Percent_Identity=30.952380952381, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI193208216, Length=384, Percent_Identity=31.25, Blast_Score=175, Evalue=6e-44, Organism=Caenorhabditis elegans, GI17507641, Length=384, Percent_Identity=31.7708333333333, Blast_Score=171, Evalue=8e-43, Organism=Caenorhabditis elegans, GI17536099, Length=392, Percent_Identity=29.5918367346939, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17536101, Length=392, Percent_Identity=29.5918367346939, Blast_Score=168, Evalue=6e-42, Organism=Caenorhabditis elegans, GI17536103, Length=392, Percent_Identity=29.5918367346939, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI71990816, Length=353, Percent_Identity=32.5779036827195, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI25148203, Length=407, Percent_Identity=26.7813267813268, Blast_Score=165, Evalue=6e-41, Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=29.3103448275862, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=31.7333333333333, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17556951, Length=354, Percent_Identity=30.225988700565, Blast_Score=148, Evalue=7e-36, Organism=Caenorhabditis elegans, GI17553716, Length=353, Percent_Identity=26.0623229461756, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=35.2941176470588, Blast_Score=125, Evalue=8e-29, Organism=Caenorhabditis elegans, GI71997889, Length=466, Percent_Identity=26.8240343347639, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI25148291, Length=334, Percent_Identity=25.4491017964072, Blast_Score=121, Evalue=9e-28, Organism=Caenorhabditis elegans, GI25148205, Length=334, Percent_Identity=25.1497005988024, Blast_Score=115, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17557982, Length=381, Percent_Identity=25.1968503937008, Blast_Score=99, Evalue=6e-21, Organism=Caenorhabditis elegans, GI71987152, Length=96, Percent_Identity=40.625, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17566630, Length=340, Percent_Identity=24.1176470588235, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25145561, Length=393, Percent_Identity=23.9185750636132, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI71987997, Length=353, Percent_Identity=23.7960339943343, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71987993, Length=353, Percent_Identity=23.7960339943343, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6321856, Length=406, Percent_Identity=37.4384236453202, Blast_Score=273, Evalue=4e-74, Organism=Saccharomyces cerevisiae, GI6324778, Length=388, Percent_Identity=38.1443298969072, Blast_Score=270, Evalue=5e-73, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=39.8305084745763, Blast_Score=264, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6325138, Length=388, Percent_Identity=37.6288659793814, Blast_Score=263, Evalue=4e-71, Organism=Saccharomyces cerevisiae, GI6323021, Length=395, Percent_Identity=38.2278481012658, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6321360, Length=334, Percent_Identity=42.5149700598802, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=34.9862258953168, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=34.4262295081967, Blast_Score=233, Evalue=5e-62, Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=36.5650969529086, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6320173, Length=399, Percent_Identity=33.5839598997494, Blast_Score=223, Evalue=8e-59, Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=37.5, Blast_Score=219, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6322912, Length=374, Percent_Identity=33.6898395721925, Blast_Score=206, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6322323, Length=374, Percent_Identity=33.6898395721925, Blast_Score=206, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6320449, Length=372, Percent_Identity=34.4086021505376, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6319714, Length=378, Percent_Identity=32.8042328042328, Blast_Score=199, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6324620, Length=364, Percent_Identity=33.5164835164835, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6321963, Length=400, Percent_Identity=32.75, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6319618, Length=448, Percent_Identity=30.5803571428571, Blast_Score=186, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=399, Percent_Identity=31.328320802005, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=30.6179775280899, Blast_Score=176, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6321267, Length=422, Percent_Identity=31.7535545023697, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6320400, Length=365, Percent_Identity=29.8630136986301, Blast_Score=154, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=442, Percent_Identity=28.2805429864253, Blast_Score=140, Evalue=6e-34, Organism=Saccharomyces cerevisiae, GI6324366, Length=358, Percent_Identity=25.9776536312849, Blast_Score=126, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6321374, Length=406, Percent_Identity=26.3546798029557, Blast_Score=114, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6323306, Length=321, Percent_Identity=26.1682242990654, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24585582, Length=365, Percent_Identity=38.6301369863014, Blast_Score=268, Evalue=9e-72, Organism=Drosophila melanogaster, GI17985987, Length=397, Percent_Identity=38.0352644836272, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI18857967, Length=389, Percent_Identity=38.560411311054, Blast_Score=261, Evalue=5e-70, Organism=Drosophila melanogaster, GI24584399, Length=376, Percent_Identity=38.8297872340425, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI28574962, Length=371, Percent_Identity=36.9272237196765, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24584994, Length=397, Percent_Identity=34.5088161209068, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24662330, Length=387, Percent_Identity=35.9173126614987, Blast_Score=252, Evalue=5e-67, Organism=Drosophila melanogaster, GI24642151, Length=368, Percent_Identity=35.5978260869565, Blast_Score=248, Evalue=1e-65, Organism=Drosophila melanogaster, GI21355075, Length=365, Percent_Identity=35.3424657534247, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI24644479, Length=378, Percent_Identity=34.6560846560847, Blast_Score=241, Evalue=6e-64, Organism=Drosophila melanogaster, GI24644483, Length=378, Percent_Identity=34.6560846560847, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI281361218, Length=378, Percent_Identity=34.6560846560847, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24644481, Length=378, Percent_Identity=34.6560846560847, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24644487, Length=378, Percent_Identity=34.6560846560847, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI45551833, Length=378, Percent_Identity=34.6560846560847, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24644485, Length=378, Percent_Identity=34.6560846560847, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI21356161, Length=365, Percent_Identity=35.8904109589041, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI17977678, Length=366, Percent_Identity=34.9726775956284, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24645031, Length=355, Percent_Identity=33.8028169014084, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24583281, Length=365, Percent_Identity=35.0684931506849, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24583279, Length=365, Percent_Identity=35.0684931506849, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI28575014, Length=357, Percent_Identity=34.453781512605, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24582080, Length=380, Percent_Identity=34.2105263157895, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24582078, Length=380, Percent_Identity=34.2105263157895, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI17136248, Length=380, Percent_Identity=34.2105263157895, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24582075, Length=380, Percent_Identity=34.2105263157895, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI28571808, Length=385, Percent_Identity=33.2467532467532, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI28571809, Length=385, Percent_Identity=33.2467532467532, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI17136814, Length=463, Percent_Identity=31.9654427645788, Blast_Score=208, Evalue=8e-54, Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=36.741214057508, Blast_Score=205, Evalue=5e-53, Organism=Drosophila melanogaster, GI24642822, Length=402, Percent_Identity=33.0845771144279, Blast_Score=201, Evalue=9e-52, Organism=Drosophila melanogaster, GI24581954, Length=380, Percent_Identity=31.5789473684211, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI24581952, Length=380, Percent_Identity=31.5789473684211, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI24581956, Length=380, Percent_Identity=31.5789473684211, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI21355559, Length=370, Percent_Identity=35.6756756756757, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI28571338, Length=447, Percent_Identity=29.3064876957494, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI18859659, Length=447, Percent_Identity=29.3064876957494, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI19920478, Length=380, Percent_Identity=31.0526315789474, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24643725, Length=394, Percent_Identity=29.9492385786802, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI24666101, Length=377, Percent_Identity=32.0954907161804, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI17647335, Length=354, Percent_Identity=27.9661016949153, Blast_Score=165, Evalue=8e-41, Organism=Drosophila melanogaster, GI20130173, Length=329, Percent_Identity=30.0911854103343, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24668515, Length=358, Percent_Identity=27.0949720670391, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI17136666, Length=426, Percent_Identity=27.2300469483568, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24640164, Length=383, Percent_Identity=24.0208877284595, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24646066, Length=380, Percent_Identity=23.9473684210526, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 57026; Mature: 56895
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFSDLGLSPATLKAVAETGYTTATPIQAEAIPMALQGRDVLGIAQTGTGKTAAFTLPM CCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEEHHH IDRLAAGRAKARMPRALVIAPTRELADQVSASFEKYAMGQKLTWALLIGGVSFKDQEQKL HHHHHCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH DRGVDVLIATPGRLLDHFERGKLLMTGVQIMVVDEADRMLDMGFIPDLERIFKLTPAKKQ HCCCEEEEECCHHHHHHHHCCCEEEECEEEEEECCHHHHHHCCCCCCHHHHHHCCCCCCE TLFFSATMPPEITRLTKQFLNDPVRIEASRPATTAETITQYLVRIPSADPKAKRTALREL EEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH IGRAEINNGIVFCNRKTEVDIVAKSLKKHGFDAAAIHGDLDQATRMRTLESFRNGELKLL HHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEE CASDVAARGLDIPAVSHVFNFDVPHHADDYVHRIGRTGRAGRTGEAFMIVTPADSKNLDK ECCCHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHH VLKLIGKTPEEVSLDLDWANIKDEPRPGRGRERGGRERKRKPREAREPRPRREKAEAAPA HHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHCCCHHHHCCCHHHCCCCCCHHHHHCCCC PAAEPAAQPQPAPRPARERPAEESRPARAERPARERPERERSERERPQRERPERERAEAQ CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCHHHHHHHHCCHHCCCHHHHHHHH DRRRGRDDGDRVVGFGSDVPAFLQRPPPRSTKD HHHCCCCCCCEEEECCCCCHHHHCCCCCCCCCC >Mature Secondary Structure TEFSDLGLSPATLKAVAETGYTTATPIQAEAIPMALQGRDVLGIAQTGTGKTAAFTLPM CCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEEHHH IDRLAAGRAKARMPRALVIAPTRELADQVSASFEKYAMGQKLTWALLIGGVSFKDQEQKL HHHHHCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH DRGVDVLIATPGRLLDHFERGKLLMTGVQIMVVDEADRMLDMGFIPDLERIFKLTPAKKQ HCCCEEEEECCHHHHHHHHCCCEEEECEEEEEECCHHHHHHCCCCCCHHHHHHCCCCCCE TLFFSATMPPEITRLTKQFLNDPVRIEASRPATTAETITQYLVRIPSADPKAKRTALREL EEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH IGRAEINNGIVFCNRKTEVDIVAKSLKKHGFDAAAIHGDLDQATRMRTLESFRNGELKLL HHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEE CASDVAARGLDIPAVSHVFNFDVPHHADDYVHRIGRTGRAGRTGEAFMIVTPADSKNLDK ECCCHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHH VLKLIGKTPEEVSLDLDWANIKDEPRPGRGRERGGRERKRKPREAREPRPRREKAEAAPA HHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHCCCHHHHCCCHHHCCCCCCHHHHHCCCC PAAEPAAQPQPAPRPARERPAEESRPARAERPARERPERERSERERPQRERPERERAEAQ CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCHHHHHHHHCCHHCCCHHHHHHHH DRRRGRDDGDRVVGFGSDVPAFLQRPPPRSTKD HHHCCCCCCCEEEECCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]