| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105146
Identifier: 197105146
GI number: 197105146
Start: 1887599
End: 1887985
Strand: Direct
Name: 197105146
Synonym: PHZ_c1683
Alternate gene names: NA
Gene position: 1887599-1887985 (Clockwise)
Preceding gene: 197105145
Following gene: 197105150
Centisome position: 47.23
GC content: 74.94
Gene sequence:
>387_bases GTGATCGTCGAGGTCGTCGGCGCGGTCGTCCGCGACGGCGCCGGCCGTCTGCTCGTGGTCCGCAAGCGCGGGACGCAGCG CTTCATGCTGCCGGGCGGCAAGCCCGAGCCGGGCGAGGACGACCTGGCGGCTCTCGCCCGAGAGCTGGCGGAGGAACTGG GCGTAAGCCTGCTCTCGGCCCGCCCGCTCGGCGTCTTCGAGGCGCCCGCGGCCAACGAGCCCGGCCGCACCGTACGCTCC CGCCCCTATGCGGCGGAGATCGAAGGCGAGCCCGCGTGCGCGGCCGAGATCGAGGACCTCCGCTGGATCGACCCGCAGGC GCCGGACGTCCTGCTCGCGCCGGTGCTGGAGCGCGAGATCCTGCCCGCGATCAGGCCGTTCCGCTGA
Upstream 100 bases:
>100_bases AGGAACGCGCCATCCTGGAGAGCCTCGGCGCCTTCAAGCGGGCCGGCGCCGCCGGGGTCATCACCTACTTCGCGCCCCGG GCGGCGCGCCTCCTGGGCGC
Downstream 100 bases:
>100_bases GCCACTCCCGCAGGATGGCGTTCACCTGTTCGGGCGCTTCCTGCTGGACCCAGTGGGAGACGCCCGGGAGGCGCCGGATC GTGAGGTTTTCGACGTAAGT
Product: MutT/nudix family protein
Products: NA
Alternate protein names: NUDIX Family Protein; MutT/NUDIX Family Protein; NUDIX Family Hydrolase; MutT/Nudix Family Hydrolase; MutT Family NTP Pyrophosphatase; MutT/Nudix Family Protein; MutT/Nudix Family Phosphohydrolase; Hydrolase Nudix Family; NUDIX Protein; Hydrolase Nudix Family Protein
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MIVEVVGAVVRDGAGRLLVVRKRGTQRFMLPGGKPEPGEDDLAALARELAEELGVSLLSARPLGVFEAPAANEPGRTVRS RPYAAEIEGEPACAAEIEDLRWIDPQAPDVLLAPVLEREILPAIRPFR
Sequences:
>Translated_128_residues MIVEVVGAVVRDGAGRLLVVRKRGTQRFMLPGGKPEPGEDDLAALARELAEELGVSLLSARPLGVFEAPAANEPGRTVRS RPYAAEIEGEPACAAEIEDLRWIDPQAPDVLLAPVLEREILPAIRPFR >Mature_128_residues MIVEVVGAVVRDGAGRLLVVRKRGTQRFMLPGGKPEPGEDDLAALARELAEELGVSLLSARPLGVFEAPAANEPGRTVRS RPYAAEIEGEPACAAEIEDLRWIDPQAPDVLLAPVLEREILPAIRPFR
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13814; Mature: 13814
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVEVVGAVVRDGAGRLLVVRKRGTQRFMLPGGKPEPGEDDLAALARELAEELGVSLLSA CHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHCC RPLGVFEAPAANEPGRTVRSRPYAAEIEGEPACAAEIEDLRWIDPQAPDVLLAPVLEREI CCCCCEECCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHH LPAIRPFR HHHCCCCC >Mature Secondary Structure MIVEVVGAVVRDGAGRLLVVRKRGTQRFMLPGGKPEPGEDDLAALARELAEELGVSLLSA CHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHCC RPLGVFEAPAANEPGRTVRSRPYAAEIEGEPACAAEIEDLRWIDPQAPDVLLAPVLEREI CCCCCEECCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHH LPAIRPFR HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA