| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is thiL [H]
Identifier: 197105130
GI number: 197105130
Start: 1873071
End: 1874021
Strand: Reverse
Name: thiL [H]
Synonym: PHZ_c1667
Alternate gene names: 197105130
Gene position: 1874021-1873071 (Counterclockwise)
Preceding gene: 197105131
Following gene: 197105128
Centisome position: 46.89
GC content: 74.66
Gene sequence:
>951_bases ATGTCCGGCCTGGATGAGTTCGGCGAGATCGCAAGGCTCTTCCGCCCGCTGACCCGCGGGGCTCCCGGCGCGTTCGAGCT CAAGGACGACGCCGCCGTCATTCCCTCCCGGCCGGGGTTCGACCTGGTGGTCACCAAGGACGCCGTGGTCGAGGGCGTCC ACGTGCCGAAGGGCGAGGCGCCCGACCTGATCGCGCGCAAGCTGGTGCGGGTGAACCTGTCGGACCTGGCCGCCAAGGGC GCCGAGCCGGCGGGGTGCCTGCTGGCCGTCGCCTGGCCGCGCGCCTATCGCCTGAAGGACCGGGAACGGTTCGTCCTGGG CCTGGCCGCCGATCTCGAGACCTACGCCTTGCCGCTGCTGGGCGGGGACACCGTGGCCATGCCGGACGGTCCGCTCACCG CCAGCCTGACCGCCTTCGGCTGGGTCCCGGAGGGGCGGATGCTGCGCCGCGGCGGCGCCCGCCCGGGGGACCTCGTCCTG GTCAGCGGAGCGATCGGGGACGCGACCCTGGGCCTGGCCGCGGTCCAGGGCGAGATCGAGGATCCCGACGGCTCGCTGAC CTATCGCTACCGGCTGCCCGAACCGCGGCTGGACGTGCGGGCGGCGCTGCGCCGCACCGCCACCGCCACGGCCGACATCT CGGACGGGTTGATCGCCGACGCCCGCCACATCGCCGAGGCCAGCGAGGTGGCGATCACCCTCGACCTCGAGCAGATGCCG CTCTCCCGCGCGGCGGCCACCTGGCTGGAGGGGCAGCCCGACACCACCGCCGCCCTGCTGCGCCTCGCCTCGGGCGGGGA CGACTACGAGATCGTCTGCACCGTTCCGTCGGGGGTTCGCAAGCCGGCCGGCTTCACCGTCGTGGGCAGGGTTTCGGAGG GGGCGGGCGTGGAGGTCCGCGCGCTGGGCCGCACACTGGAGGCCGGAGCCGGGGGCTGGCGGCACGGCTGA
Upstream 100 bases:
>100_bases ACCGAGGTGGCGATCGACGAGTACGTCGAGCTGACGAAGAGCTTCTTCGAGGGACCCGAACCGGGCTTCGTGAACGGGGC CCTGGACGGCGTGGCGCGGG
Downstream 100 bases:
>100_bases GGCCGCGCGGGGCTAGATGTACTCGAAGCGCACGGTGGACCGGCCGAAGTCCAACGCCACCTGCTCGAACTGCATCAGGA GGTCCATGCCGAGCACCAGC
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSGLDEFGEIARLFRPLTRGAPGAFELKDDAAVIPSRPGFDLVVTKDAVVEGVHVPKGEAPDLIARKLVRVNLSDLAAKG AEPAGCLLAVAWPRAYRLKDRERFVLGLAADLETYALPLLGGDTVAMPDGPLTASLTAFGWVPEGRMLRRGGARPGDLVL VSGAIGDATLGLAAVQGEIEDPDGSLTYRYRLPEPRLDVRAALRRTATATADISDGLIADARHIAEASEVAITLDLEQMP LSRAAATWLEGQPDTTAALLRLASGGDDYEIVCTVPSGVRKPAGFTVVGRVSEGAGVEVRALGRTLEAGAGGWRHG
Sequences:
>Translated_316_residues MSGLDEFGEIARLFRPLTRGAPGAFELKDDAAVIPSRPGFDLVVTKDAVVEGVHVPKGEAPDLIARKLVRVNLSDLAAKG AEPAGCLLAVAWPRAYRLKDRERFVLGLAADLETYALPLLGGDTVAMPDGPLTASLTAFGWVPEGRMLRRGGARPGDLVL VSGAIGDATLGLAAVQGEIEDPDGSLTYRYRLPEPRLDVRAALRRTATATADISDGLIADARHIAEASEVAITLDLEQMP LSRAAATWLEGQPDTTAALLRLASGGDDYEIVCTVPSGVRKPAGFTVVGRVSEGAGVEVRALGRTLEAGAGGWRHG >Mature_315_residues SGLDEFGEIARLFRPLTRGAPGAFELKDDAAVIPSRPGFDLVVTKDAVVEGVHVPKGEAPDLIARKLVRVNLSDLAAKGA EPAGCLLAVAWPRAYRLKDRERFVLGLAADLETYALPLLGGDTVAMPDGPLTASLTAFGWVPEGRMLRRGGARPGDLVLV SGAIGDATLGLAAVQGEIEDPDGSLTYRYRLPEPRLDVRAALRRTATATADISDGLIADARHIAEASEVAITLDLEQMPL SRAAATWLEGQPDTTAALLRLASGGDDYEIVCTVPSGVRKPAGFTVVGRVSEGAGVEVRALGRTLEAGAGGWRHG
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=276, Percent_Identity=38.0434782608696, Blast_Score=141, Evalue=7e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 33131; Mature: 33000
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLDEFGEIARLFRPLTRGAPGAFELKDDAAVIPSRPGFDLVVTKDAVVEGVHVPKGEA CCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEECCCCCCCEEEEECHHHHCCCCCCCCCC PDLIARKLVRVNLSDLAAKGAEPAGCLLAVAWPRAYRLKDRERFVLGLAADLETYALPLL HHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEE GGDTVAMPDGPLTASLTAFGWVPEGRMLRRGGARPGDLVLVSGAIGDATLGLAAVQGEIE CCCEEECCCCCCEEEEEEEECCCCCHHHHCCCCCCCCEEEEECCCCCHHHEEEEEECCCC DPDGSLTYRYRLPEPRLDVRAALRRTATATADISDGLIADARHIAEASEVAITLDLEQMP CCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHCC LSRAAATWLEGQPDTTAALLRLASGGDDYEIVCTVPSGVRKPAGFTVVGRVSEGAGVEVR HHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEEE ALGRTLEAGAGGWRHG ECCCCHHCCCCCCCCC >Mature Secondary Structure SGLDEFGEIARLFRPLTRGAPGAFELKDDAAVIPSRPGFDLVVTKDAVVEGVHVPKGEA CCHHHHHHHHHHHHHHHCCCCCCEEECCCCEECCCCCCCEEEEECHHHHCCCCCCCCCC PDLIARKLVRVNLSDLAAKGAEPAGCLLAVAWPRAYRLKDRERFVLGLAADLETYALPLL HHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEE GGDTVAMPDGPLTASLTAFGWVPEGRMLRRGGARPGDLVLVSGAIGDATLGLAAVQGEIE CCCEEECCCCCCEEEEEEEECCCCCHHHHCCCCCCCCEEEEECCCCCHHHEEEEEECCCC DPDGSLTYRYRLPEPRLDVRAALRRTATATADISDGLIADARHIAEASEVAITLDLEQMP CCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHCC LSRAAATWLEGQPDTTAALLRLASGGDDYEIVCTVPSGVRKPAGFTVVGRVSEGAGVEVR HHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEEE ALGRTLEAGAGGWRHG ECCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]