Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197105129

Identifier: 197105129

GI number: 197105129

Start: 1872123

End: 1873058

Strand: Direct

Name: 197105129

Synonym: PHZ_c1666

Alternate gene names: NA

Gene position: 1872123-1873058 (Clockwise)

Preceding gene: 197105126

Following gene: 197105135

Centisome position: 46.85

GC content: 70.3

Gene sequence:

>936_bases
ATGTCTCCGACCAGACGCCAGGCCGCCATCGGTCTCCTGACCGCCGCCGCGGCGCCCGGGCTCGCCCGCGCTCAGGAGCC
GCCGCCGCCGGAGATCCCGGACGTCGACGAGGAGCCCACCAAGCTCGACACCGTCGCGGGGCGCGACACCCACATGATGG
CGCCGGTGATCGTCAACGGCCGCGGGCCCTACCAATTCCTGCTCGACACGGGCGCCAACGTCAGCTGCGTCTCGCACCAT
CTGGTCGAAGAACTGGCGCTGACCCCTGGCCCGCCCGCCCGGGTCCACACCATTGTCGGCGTGCGCGAGCGCCCCAGCTT
CTTCATCGACGACCTGCAGGTCGGCAAGCGCAACCGCAAGCGCGTCCAGGCCCCTGCCCTGCCCTTCAAGGACCCGGCGG
TGCACGGCGTCCTGGGGATCGACTGGCTGAAGGGCCAGCGCCTGGTGCTCGACTTCAAGAAGAACGCCATCGAGATCACC
AAGTCGAAGTCCGACCACGCCCACCCGGGGCGGGTCGTGGTGGTCCCGGCCCGGCGGCGGCTGGGCCAGCTGACCATCGT
CGACGCCGACCTGAACGGCACGCCGATCAGCGCGATGATCGACTCCGGCGCCGAGGGCACGCTCTGCAACGGCCCGCTGC
GGGACCTCATCCGCGCGTCCGAGCGGCGCCGCGGCAAGGTGGACCCGCCGCAGATCGTCCGGATGGAGACCCTGGCCGGC
GAGGTGTTCCGCGGCGAAGGCGTCTTCCTGCCGTTCCTGCGCCTGGGCGGCCTGCACCTGGGCAACGTGCCGGTGACCTA
CGCGGACATGCACGTCTTCAAGATCTGGGGCCTTGAGGACAAGCCGGCGCTGGTGCTCGGCATGGACCTCCTGATGCAGT
TCGAGCAGGTGGCGTTGGACTTCGGCCGGTCCACCGTGCGCTTCGAGTACATCTAG

Upstream 100 bases:

>100_bases
ATTCGTTGAATCATCCTTTCAGGCTCCACCGCTCATGGGCGCCTTCGGTGAACGGTGGTATGATTTTCAACAAGAAGATG
TTGGGAGGAGGTCCGGAGCC

Downstream 100 bases:

>100_bases
CCCCGCGCGGCCTCAGCCGTGCCGCCAGCCCCCGGCTCCGGCCTCCAGTGTGCGGCCCAGCGCGCGGACCTCCACGCCCG
CCCCCTCCGAAACCCTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase Aspartic

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSPTRRQAAIGLLTAAAAPGLARAQEPPPPEIPDVDEEPTKLDTVAGRDTHMMAPVIVNGRGPYQFLLDTGANVSCVSHH
LVEELALTPGPPARVHTIVGVRERPSFFIDDLQVGKRNRKRVQAPALPFKDPAVHGVLGIDWLKGQRLVLDFKKNAIEIT
KSKSDHAHPGRVVVVPARRRLGQLTIVDADLNGTPISAMIDSGAEGTLCNGPLRDLIRASERRRGKVDPPQIVRMETLAG
EVFRGEGVFLPFLRLGGLHLGNVPVTYADMHVFKIWGLEDKPALVLGMDLLMQFEQVALDFGRSTVRFEYI

Sequences:

>Translated_311_residues
MSPTRRQAAIGLLTAAAAPGLARAQEPPPPEIPDVDEEPTKLDTVAGRDTHMMAPVIVNGRGPYQFLLDTGANVSCVSHH
LVEELALTPGPPARVHTIVGVRERPSFFIDDLQVGKRNRKRVQAPALPFKDPAVHGVLGIDWLKGQRLVLDFKKNAIEIT
KSKSDHAHPGRVVVVPARRRLGQLTIVDADLNGTPISAMIDSGAEGTLCNGPLRDLIRASERRRGKVDPPQIVRMETLAG
EVFRGEGVFLPFLRLGGLHLGNVPVTYADMHVFKIWGLEDKPALVLGMDLLMQFEQVALDFGRSTVRFEYI
>Mature_310_residues
SPTRRQAAIGLLTAAAAPGLARAQEPPPPEIPDVDEEPTKLDTVAGRDTHMMAPVIVNGRGPYQFLLDTGANVSCVSHHL
VEELALTPGPPARVHTIVGVRERPSFFIDDLQVGKRNRKRVQAPALPFKDPAVHGVLGIDWLKGQRLVLDFKKNAIEITK
SKSDHAHPGRVVVVPARRRLGQLTIVDADLNGTPISAMIDSGAEGTLCNGPLRDLIRASERRRGKVDPPQIVRMETLAGE
VFRGEGVFLPFLRLGGLHLGNVPVTYADMHVFKIWGLEDKPALVLGMDLLMQFEQVALDFGRSTVRFEYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34018; Mature: 33887

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTRRQAAIGLLTAAAAPGLARAQEPPPPEIPDVDEEPTKLDTVAGRDTHMMAPVIVNG
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEECC
RGPYQFLLDTGANVSCVSHHLVEELALTPGPPARVHTIVGVRERPSFFIDDLQVGKRNRK
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEHHHHHCCCCHH
RVQAPALPFKDPAVHGVLGIDWLKGQRLVLDFKKNAIEITKSKSDHAHPGRVVVVPARRR
HCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCEEEEECCCHH
LGQLTIVDADLNGTPISAMIDSGAEGTLCNGPLRDLIRASERRRGKVDPPQIVRMETLAG
CCEEEEEECCCCCCCHHHEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHEEHHHHHC
EVFRGEGVFLPFLRLGGLHLGNVPVTYADMHVFKIWGLEDKPALVLGMDLLMQFEQVALD
CEECCCCCEEEHHHHCCEEECCCCEEEECEEEEEEECCCCCCEEEEHHHHHHHHHHHHHH
FGRSTVRFEYI
CCCCEEEEEEC
>Mature Secondary Structure 
SPTRRQAAIGLLTAAAAPGLARAQEPPPPEIPDVDEEPTKLDTVAGRDTHMMAPVIVNG
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEECC
RGPYQFLLDTGANVSCVSHHLVEELALTPGPPARVHTIVGVRERPSFFIDDLQVGKRNRK
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEHHHHHCCCCHH
RVQAPALPFKDPAVHGVLGIDWLKGQRLVLDFKKNAIEITKSKSDHAHPGRVVVVPARRR
HCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCEEEEECCCHH
LGQLTIVDADLNGTPISAMIDSGAEGTLCNGPLRDLIRASERRRGKVDPPQIVRMETLAG
CCEEEEEECCCCCCCHHHEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHEEHHHHHC
EVFRGEGVFLPFLRLGGLHLGNVPVTYADMHVFKIWGLEDKPALVLGMDLLMQFEQVALD
CEECCCCCEEEHHHHCCEEECCCCEEEECEEEEEEECCCCCCEEEEHHHHHHHHHHHHHH
FGRSTVRFEYI
CCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA