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The map label for this gene is 197105126

Identifier: 197105126

GI number: 197105126

Start: 1868607

End: 1869125

Strand: Direct

Name: 197105126

Synonym: PHZ_c1663

Alternate gene names: NA

Gene position: 1868607-1869125 (Clockwise)

Preceding gene: 197105118

Following gene: 197105129

Centisome position: 46.76

GC content: 68.98

Gene sequence:

>519_bases
TTGCAGGTGATTGGAAACCTTCGAATGCTCCGCAGAGCCGCTCCCGCCGCCCTCGCCGTCGGCCTGATCGCCGGGATGGG
GCTTTCCGCCTGCGCCCCGATCACGACCTACTCGGGCTTCCAGGCGATCGACGCCAATCCCAAGGACGTCCAGGTCGGGA
CGGACACCAAGTCGACCGTCCGCGCCAAGCTGGGCTCGCCCTCGGCCACCTCGACGTTCGACCCGAACGTCTGGTTCTAC
GTCAACCAGGTGAAGCAGCGGGTCGCCTTCCGCAAGCCGCAGGTCACCGCCCGGAACGTGACGGCCATCGTGTTCGACAA
GGAGTCCGAGGCCGTCGCCGAGGTGAACAACTACACGCTGAAGGACGGCAAGGTGGTGGCGTTCAACGGGCGCGAGACCC
CGACCCGCGGCCGCGAGATGACCATCCTCGAGCAGCTGCTCGGCAGCGTCGGCCGCGCCGGCATGCTGCCGAACGACGAC
GAGGGCGTGCCCGGCAGCCGCCCCGGCGACCGCCGCTAG

Upstream 100 bases:

>100_bases
CAGGCTTCGGAGCATGGACGGCCTCGATTTCGCCCCGGAGGGCGGCTAAAGGGCGGCATTGAACTAAGGGGCCGCCGACG
ATAGGTCAAAGCCTCTTGCC

Downstream 100 bases:

>100_bases
GCGGGGCGCGTCCCTTTCGGGCGACCGCCGCCAGGCGCGTCGCCCTCTCCGCTCCCGCGGAGGCGCACAACGAAGAACGC
CCCGGAGATCGCTCTCCGGG

Product: small protein A (tmRNA-binding)

Products: NA

Alternate protein names: Lipoprotein SmpA/OmlA Family; SmpA/OmlA; SmpA/OmlA Domain Protein; Small Protein A; Outer Membrane Protein; Lipoprotein SmpA/OmlA Family Protein; SmAll Protein A; SmpA/OmlA Family Lipoprotein; Smpa/Omla Domain-Containing Protein; SmpA / OmlA Family; SmpA Protein; SmpA/OmlA Family Protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MQVIGNLRMLRRAAPAALAVGLIAGMGLSACAPITTYSGFQAIDANPKDVQVGTDTKSTVRAKLGSPSATSTFDPNVWFY
VNQVKQRVAFRKPQVTARNVTAIVFDKESEAVAEVNNYTLKDGKVVAFNGRETPTRGREMTILEQLLGSVGRAGMLPNDD
EGVPGSRPGDRR

Sequences:

>Translated_172_residues
MQVIGNLRMLRRAAPAALAVGLIAGMGLSACAPITTYSGFQAIDANPKDVQVGTDTKSTVRAKLGSPSATSTFDPNVWFY
VNQVKQRVAFRKPQVTARNVTAIVFDKESEAVAEVNNYTLKDGKVVAFNGRETPTRGREMTILEQLLGSVGRAGMLPNDD
EGVPGSRPGDRR
>Mature_172_residues
MQVIGNLRMLRRAAPAALAVGLIAGMGLSACAPITTYSGFQAIDANPKDVQVGTDTKSTVRAKLGSPSATSTFDPNVWFY
VNQVKQRVAFRKPQVTARNVTAIVFDKESEAVAEVNNYTLKDGKVVAFNGRETPTRGREMTILEQLLGSVGRAGMLPNDD
EGVPGSRPGDRR

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18452; Mature: 18452

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVIGNLRMLRRAAPAALAVGLIAGMGLSACAPITTYSGFQAIDANPKDVQVGTDTKSTV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCHHHH
RAKLGSPSATSTFDPNVWFYVNQVKQRVAFRKPQVTARNVTAIVFDKESEAVAEVNNYTL
HHHCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCEEE
KDGKVVAFNGRETPTRGREMTILEQLLGSVGRAGMLPNDDEGVPGSRPGDRR
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQVIGNLRMLRRAAPAALAVGLIAGMGLSACAPITTYSGFQAIDANPKDVQVGTDTKSTV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCHHHH
RAKLGSPSATSTFDPNVWFYVNQVKQRVAFRKPQVTARNVTAIVFDKESEAVAEVNNYTL
HHHCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCEEE
KDGKVVAFNGRETPTRGREMTILEQLLGSVGRAGMLPNDDEGVPGSRPGDRR
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA