Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197105055

Identifier: 197105055

GI number: 197105055

Start: 1795198

End: 1796760

Strand: Direct

Name: 197105055

Synonym: PHZ_c1592

Alternate gene names: NA

Gene position: 1795198-1796760 (Clockwise)

Preceding gene: 197105054

Following gene: 197105056

Centisome position: 44.92

GC content: 71.53

Gene sequence:

>1563_bases
GTGCTCGCGCCACCGCAGGCGCGCCCCGCCGTCGGGCTCGAGGGCCCAGGTCACCTCGAGGACTCCGCCGTCCGCGCTCA
GCGCGCCGTACTTGGCCGCGTTGGTCGCCAGTTCGTGGACAATCATGCCGAGCGCCAGCGCCCGGGTCGCGTCGAGGTGG
ATGACGGGCCCGTCCAGAGAGACCCGCTCGGCGTAGGGCTCGAGCTCGCCGCGCACCACGGCGCGCAGGTCGGCGCTGCT
CCAGGCGCGGGCGGTGAGCACGTCGTGGGTGCGGGCGAGGGCCACCAGCCGCCCCTCGAAATCGCGGATGAAGGTCGCCA
TGTCGGGCGCGTTGCGGGCCGTCTGCGTCGCCATGGACTGCACGGTGGCCAGGTTGTTCTTCACCCGGTGATTGAGTTCG
TTGAGCAGGAGCTGCTGCTTCTCGGTGAAGACGGTGCGCTCGGTCACGTCGCTGCCCTGGGTGATGATGCCGGTGACGCG
GCCCTCCTCGTCCCGGATGGGCTGGTAGATGAAGTCCACGTAGCGCATCTGGACCTCCCCGCCGGGCGCGTGCTGCAGCG
GCACGGCCAGCGCGCTGCCGGCGAACGGCTCGCCGGTGGAGAAGACCCGGTCGAGGACCTCGAACAGCCCGGTTGGGGCG
ACCTCGGGCAGGGCCTCGCGAGCCGGCACTCCGATCACGTCGCGGTGCCCGATGAGTTGGCGGTAGGCGGCGTTGGCCAG
GCTGAAGACGTGGTCCGGCCCATCCAGCACGGCCACGAAGCCCGGCGCCTTCTCGAACAGCGCAAACAGCCGCTCGCCCT
GTTCGCGGTAGCGCTGCTCGCTCGCGGCGAGCGCTTCCACCGCCTCGCGCAGGCGGTTCTCGGCCAGCACCCGGCCGGTG
GTCTCGATGCAGGTGCAGAACATGCCCCTCACCGCGCCGGTCTCGTCGGGCAGGGGACTGTAGGTGAAGGTGAAGAAGGT
CGGCTCGGGATAGCCGTGGCGCTGCATCAGGAGGGGCAGGTCCTCCTGCCAGACGCCCTGGCCGTCGAGCGCCGAGCGGA
CCAGGGGCTCCAGGTCGGGCCAGATCTCGGCCCAGATCTCCTGGAACCGCAGGCCGAGGGCGGCGGGGTGCCGGGCGCCC
AGGATCGGCGCGTAGGCGTCGTTGTAGATGAAGGCGAGCTCGGGGCCCCAGGCGATGAACATCGGCTGCTGGGTGTTCAG
CATCATCGCCGTGGCGGTCCGCAGGGCCTGGGGCCAGGCGGCGGGGTCGCCGAGCGGCGAGCGCGACCAGTCGTGGGCGC
GCATGAGCGCGCCCATCGCCCCGCCGCCCTGGAGGAAGCTCGGAACCGTCACCGGACGCCGCGCGCTATCGCGCGCGCCG
GAGCCCCAAGCGGCGCCTTGCGCCACGAGCCTGCCGGCCATCTCCGCGTCATGCTGGTCCCCCGCACCGTCGGCGTCCGG
AGGAGAACGCACAACCCCGCCCAATGGTTTAGCCGCGGCGGCGTGCAGCATTGCCGTGGCGTGTTTCGGACCTTACAGCC
CAAGGCCGTTCATCCGTTTCCGGCGTCCCAATGTCCAGCGTAA

Upstream 100 bases:

>100_bases
AGTCGATACGCATGGAGCCGCGCAGGTCTCCGGCGCTGAGCTTCTCCATCAGCCGGGCGCCGAACCCCTGGCGCGTGGGG
GAAACGACGGGCGGCCCGTC

Downstream 100 bases:

>100_bases
CGGCCCGCGAGTTCGCGCCGGCCCCCTCCATGTCCGAGTACATCCAGGGGCTGCTGGAGGAGACGCCGGAGGTCCGGGAT
TCCGAACGGCAGCGCCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MLAPPQARPAVGLEGPGHLEDSAVRAQRAVLGRVGRQFVDNHAERQRPGRVEVDDGPVQRDPLGVGLELAAHHGAQVGAA
PGAGGEHVVGAGEGHQPPLEIADEGRHVGRVAGRLRRHGLHGGQVVLHPVIEFVEQELLLLGEDGALGHVAALGDDAGDA
ALLVPDGLVDEVHVAHLDLPAGRVLQRHGQRAAGERLAGGEDPVEDLEQPGWGDLGQGLASRHSDHVAVPDELAVGGVGQ
AEDVVRPIQHGHEARRLLEQRKQPLALFAVALLARGERFHRLAQAVLGQHPAGGLDAGAEHAPHRAGLVGQGTVGEGEEG
RLGIAVALHQEGQVLLPDALAVERRADQGLQVGPDLGPDLLEPQAEGGGVPGAQDRRVGVVVDEGELGAPGDEHRLLGVQ
HHRRGGPQGLGPGGGVAERRARPVVGAHERAHRPAALEEARNRHRTPRAIARAGAPSGALRHEPAGHLRVMLVPRTVGVR
RRTHNPAQWFSRGGVQHCRGVFRTLQPKAVHPFPASQCPA

Sequences:

>Translated_520_residues
MLAPPQARPAVGLEGPGHLEDSAVRAQRAVLGRVGRQFVDNHAERQRPGRVEVDDGPVQRDPLGVGLELAAHHGAQVGAA
PGAGGEHVVGAGEGHQPPLEIADEGRHVGRVAGRLRRHGLHGGQVVLHPVIEFVEQELLLLGEDGALGHVAALGDDAGDA
ALLVPDGLVDEVHVAHLDLPAGRVLQRHGQRAAGERLAGGEDPVEDLEQPGWGDLGQGLASRHSDHVAVPDELAVGGVGQ
AEDVVRPIQHGHEARRLLEQRKQPLALFAVALLARGERFHRLAQAVLGQHPAGGLDAGAEHAPHRAGLVGQGTVGEGEEG
RLGIAVALHQEGQVLLPDALAVERRADQGLQVGPDLGPDLLEPQAEGGGVPGAQDRRVGVVVDEGELGAPGDEHRLLGVQ
HHRRGGPQGLGPGGGVAERRARPVVGAHERAHRPAALEEARNRHRTPRAIARAGAPSGALRHEPAGHLRVMLVPRTVGVR
RRTHNPAQWFSRGGVQHCRGVFRTLQPKAVHPFPASQCPA
>Mature_520_residues
MLAPPQARPAVGLEGPGHLEDSAVRAQRAVLGRVGRQFVDNHAERQRPGRVEVDDGPVQRDPLGVGLELAAHHGAQVGAA
PGAGGEHVVGAGEGHQPPLEIADEGRHVGRVAGRLRRHGLHGGQVVLHPVIEFVEQELLLLGEDGALGHVAALGDDAGDA
ALLVPDGLVDEVHVAHLDLPAGRVLQRHGQRAAGERLAGGEDPVEDLEQPGWGDLGQGLASRHSDHVAVPDELAVGGVGQ
AEDVVRPIQHGHEARRLLEQRKQPLALFAVALLARGERFHRLAQAVLGQHPAGGLDAGAEHAPHRAGLVGQGTVGEGEEG
RLGIAVALHQEGQVLLPDALAVERRADQGLQVGPDLGPDLLEPQAEGGGVPGAQDRRVGVVVDEGELGAPGDEHRLLGVQ
HHRRGGPQGLGPGGGVAERRARPVVGAHERAHRPAALEEARNRHRTPRAIARAGAPSGALRHEPAGHLRVMLVPRTVGVR
RRTHNPAQWFSRGGVQHCRGVFRTLQPKAVHPFPASQCPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54511; Mature: 54511

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAPPQARPAVGLEGPGHLEDSAVRAQRAVLGRVGRQFVDNHAERQRPGRVEVDDGPVQR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
DPLGVGLELAAHHGAQVGAAPGAGGEHVVGAGEGHQPPLEIADEGRHVGRVAGRLRRHGL
CCCCCCHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHCCC
HGGQVVLHPVIEFVEQELLLLGEDGALGHVAALGDDAGDAALLVPDGLVDEVHVAHLDLP
CCCHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCEEEECCCCCCCCHHHEEECCC
AGRVLQRHGQRAAGERLAGGEDPVEDLEQPGWGDLGQGLASRHSDHVAVPDELAVGGVGQ
HHHHHHHHCHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCC
AEDVVRPIQHGHEARRLLEQRKQPLALFAVALLARGERFHRLAQAVLGQHPAGGLDAGAE
HHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
HAPHRAGLVGQGTVGEGEEGRLGIAVALHQEGQVLLPDALAVERRADQGLQVGPDLGPDL
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEECCHHHHHHHHHCCCCCCCCCCCHHH
LEPQAEGGGVPGAQDRRVGVVVDEGELGAPGDEHRLLGVQHHRRGGPQGLGPGGGVAERR
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCHHHHH
ARPVVGAHERAHRPAALEEARNRHRTPRAIARAGAPSGALRHEPAGHLRVMLVPRTVGVR
CCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHH
RRTHNPAQWFSRGGVQHCRGVFRTLQPKAVHPFPASQCPA
HCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAPPQARPAVGLEGPGHLEDSAVRAQRAVLGRVGRQFVDNHAERQRPGRVEVDDGPVQR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
DPLGVGLELAAHHGAQVGAAPGAGGEHVVGAGEGHQPPLEIADEGRHVGRVAGRLRRHGL
CCCCCCHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHCCC
HGGQVVLHPVIEFVEQELLLLGEDGALGHVAALGDDAGDAALLVPDGLVDEVHVAHLDLP
CCCHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCCEEEECCCCCCCCHHHEEECCC
AGRVLQRHGQRAAGERLAGGEDPVEDLEQPGWGDLGQGLASRHSDHVAVPDELAVGGVGQ
HHHHHHHHCHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCC
AEDVVRPIQHGHEARRLLEQRKQPLALFAVALLARGERFHRLAQAVLGQHPAGGLDAGAE
HHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
HAPHRAGLVGQGTVGEGEEGRLGIAVALHQEGQVLLPDALAVERRADQGLQVGPDLGPDL
CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEECCHHHHHHHHHCCCCCCCCCCCHHH
LEPQAEGGGVPGAQDRRVGVVVDEGELGAPGDEHRLLGVQHHRRGGPQGLGPGGGVAERR
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECHHHHCCCCCCCCCCCCCHHHHH
ARPVVGAHERAHRPAALEEARNRHRTPRAIARAGAPSGALRHEPAGHLRVMLVPRTVGVR
CCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHH
RRTHNPAQWFSRGGVQHCRGVFRTLQPKAVHPFPASQCPA
HCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA