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The map label for this gene is podJ [H]

Identifier: 197105018

GI number: 197105018

Start: 1755867

End: 1757369

Strand: Direct

Name: podJ [H]

Synonym: PHZ_c1555

Alternate gene names: 197105018

Gene position: 1755867-1757369 (Clockwise)

Preceding gene: 197105010

Following gene: 197105020

Centisome position: 43.94

GC content: 73.72

Gene sequence:

>1503_bases
TTGACCCGCGGAAACGTGAGCCCCGCAGATGAGGCCGCCATCGAACCGGCGGAAGACGGCCGACAGGCGTTGCACGACCT
GTTCGATCGGCTGCGCGCGCATGTCCGCCGGACCGGGGCCGACGCCATCCCGCAAGGTCCTGAAGAGCGGCGGCGGGCCG
CCCGCGATCTGCGATCGCTCTCGGCGGAGCTGAAAGGGTGGGAGCGGGCGCTGGAGACTCGGCTCGATCGCGCCGACGAT
GGCTGGTCCCTGGCGCTGGCGTCCCTCCAGCGGGATGTCGCGGCCGGAGTGCGGCGGCTGGAAAGCGAGATCGCGCAGTC
CGAGGCCCAACTCGACGCTGTGCTCGCCGGGTTCCAGGGGCGTGTCGGGCGCTGGGAGGCTGCGTCCGCCGACGGGGAGC
GCCGGTTCGCGGAGACGGCGGCTCGGGACCTGGAACGCGCGGAAGGGCGGCGGGCGCGGCAATTCGCAGAGTTCGTCCGG
GCCGTGGACCAGACCCCCGTCGTGGACCTTGGAGAACGCCCGCGCAGCGTTCCGGAGGGCGAGGCGGCCCGCGGCCCGCG
GCGGCGCTCCCGGTCGGCGGCGCTGCTGCTGTCGGCCGGAGTGGCGTGTGTCGGCCTCTCCACGCTCGCGATCGTCCTGG
AACCCCCGATGTCCCTCCCTGTGGAGGCGCTGCGCGGCGCCGATGTACTGGGCGATCTGGTGCTGCGAGGACCGATCCTG
ATCGCCCCGCCCATCGAAGTTGCAGAGGCCGCTCTCCCGGCTCCGCCCCGCTCGGCGGAGCCGTCGGCCGAGGCGCCGGC
GGGTCTGGCGGGCGCGATCGCCGACGTAGAGGCGGGGCGCCGCGGCGGGCTTGAGCAGGTTCGCCGCCTGGCCGAGGCGG
GCCAGCCTCGCGCCCAGATGTACTTGGCCAAGCTGTACGAGACAGGGCGCGGGGGCCTGGAGGCCAACTCGGCCGAGGCC
CGCCGCTGGACCGCGCGAGCGGCCGAGCGGGGCGACCCGATCGCCCAGCACAACTTGGCGCTCTATCTCCTCGAGGGGCG
CGGCGGTCCCCGGGACGAGGCCATGGCCGCCAGACTGTTCCGTCGCGCGGCGGTGGCCGGCGTGGGGGATTCCCAAGTCA
ACCTCGGCCTGCTCTACGAGACCGGAGCCGGCGTCGATCGGAACCTCGTCGAGGCCTATAAGTGGTTTCAGATCGCCGCC
CAGAACGGCGACCTTAGAGCCCGAGCCCGCGCCGTCGCCCTGGAGGAGCGGCTCTCCCGGCGCGAACTCGCCGCGGCCGA
CCGGGTGGTGGGCCGCTTCGCCGCCGGTGGGGAGCCGCCGCGGGAGACCGTTCTGGTTCCGGGCGCGGCGACCGTGGCCG
AGTCCCAGCAGAAGCTCGCGCGCCTGGGATTCTATATCGGCCCGACGGATGGTCGGGAGACCGAGTCCTATCGCGAGGCC
GTGGAGGCCTACCGGCGCAGCCAGGCCCCGGAGATCGCCAGGGTTTCGGTTGCGGGTCCCTAG

Upstream 100 bases:

>100_bases
CGCGCGGCCGGATCCGAGTTAGTAAATGATAAGACGCAATGGGAAAAATGTAGCGCCCACAGGGGGCGCGAAAGGATAAG
GGAAGCATCTGGAGCCCGCC

Downstream 100 bases:

>100_bases
GGCTCGACCAGAATCTTCACGTGGGCCTCGGGATCGCCGAGCGCCTCGAACGCGCCGGCGACGCCGTCCAGCCCCACCTT
GCCGGTGACCAGGTGCGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Polar organelle development protein [H]

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MTRGNVSPADEAAIEPAEDGRQALHDLFDRLRAHVRRTGADAIPQGPEERRRAARDLRSLSAELKGWERALETRLDRADD
GWSLALASLQRDVAAGVRRLESEIAQSEAQLDAVLAGFQGRVGRWEAASADGERRFAETAARDLERAEGRRARQFAEFVR
AVDQTPVVDLGERPRSVPEGEAARGPRRRSRSAALLLSAGVACVGLSTLAIVLEPPMSLPVEALRGADVLGDLVLRGPIL
IAPPIEVAEAALPAPPRSAEPSAEAPAGLAGAIADVEAGRRGGLEQVRRLAEAGQPRAQMYLAKLYETGRGGLEANSAEA
RRWTARAAERGDPIAQHNLALYLLEGRGGPRDEAMAARLFRRAAVAGVGDSQVNLGLLYETGAGVDRNLVEAYKWFQIAA
QNGDLRARARAVALEERLSRRELAAADRVVGRFAAGGEPPRETVLVPGAATVAESQQKLARLGFYIGPTDGRETESYREA
VEAYRRSQAPEIARVSVAGP

Sequences:

>Translated_500_residues
MTRGNVSPADEAAIEPAEDGRQALHDLFDRLRAHVRRTGADAIPQGPEERRRAARDLRSLSAELKGWERALETRLDRADD
GWSLALASLQRDVAAGVRRLESEIAQSEAQLDAVLAGFQGRVGRWEAASADGERRFAETAARDLERAEGRRARQFAEFVR
AVDQTPVVDLGERPRSVPEGEAARGPRRRSRSAALLLSAGVACVGLSTLAIVLEPPMSLPVEALRGADVLGDLVLRGPIL
IAPPIEVAEAALPAPPRSAEPSAEAPAGLAGAIADVEAGRRGGLEQVRRLAEAGQPRAQMYLAKLYETGRGGLEANSAEA
RRWTARAAERGDPIAQHNLALYLLEGRGGPRDEAMAARLFRRAAVAGVGDSQVNLGLLYETGAGVDRNLVEAYKWFQIAA
QNGDLRARARAVALEERLSRRELAAADRVVGRFAAGGEPPRETVLVPGAATVAESQQKLARLGFYIGPTDGRETESYREA
VEAYRRSQAPEIARVSVAGP
>Mature_499_residues
TRGNVSPADEAAIEPAEDGRQALHDLFDRLRAHVRRTGADAIPQGPEERRRAARDLRSLSAELKGWERALETRLDRADDG
WSLALASLQRDVAAGVRRLESEIAQSEAQLDAVLAGFQGRVGRWEAASADGERRFAETAARDLERAEGRRARQFAEFVRA
VDQTPVVDLGERPRSVPEGEAARGPRRRSRSAALLLSAGVACVGLSTLAIVLEPPMSLPVEALRGADVLGDLVLRGPILI
APPIEVAEAALPAPPRSAEPSAEAPAGLAGAIADVEAGRRGGLEQVRRLAEAGQPRAQMYLAKLYETGRGGLEANSAEAR
RWTARAAERGDPIAQHNLALYLLEGRGGPRDEAMAARLFRRAAVAGVGDSQVNLGLLYETGAGVDRNLVEAYKWFQIAAQ
NGDLRARARAVALEERLSRRELAAADRVVGRFAAGGEPPRETVLVPGAATVAESQQKLARLGFYIGPTDGRETESYREAV
EAYRRSQAPEIARVSVAGP

Specific function: PodJL provides the positional information for the localization of several polar organelles (pili, adhesive holdfast and chemotactic apparatus) by recruiting structural (CpaE) and regulatory (PleC) proteins to a specific cell pole [H]

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein. Note=Both PodJL and podJS localize to the swarmer pole at different stages of the cell division [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 Sel1-like repeats [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=132, Percent_Identity=32.5757575757576, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI19923669, Length=132, Percent_Identity=31.8181818181818, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI1786867, Length=108, Percent_Identity=32.4074074074074, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87081769, Length=121, Percent_Identity=33.0578512396694, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6319410, Length=161, Percent_Identity=33.5403726708075, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355295, Length=132, Percent_Identity=36.3636363636364, Blast_Score=84, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002477
- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01471 PG_binding_1; PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 53646; Mature: 53515

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGNVSPADEAAIEPAEDGRQALHDLFDRLRAHVRRTGADAIPQGPEERRRAARDLRSL
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
SAELKGWERALETRLDRADDGWSLALASLQRDVAAGVRRLESEIAQSEAQLDAVLAGFQG
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RVGRWEAASADGERRFAETAARDLERAEGRRARQFAEFVRAVDQTPVVDLGERPRSVPEG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
EAARGPRRRSRSAALLLSAGVACVGLSTLAIVLEPPMSLPVEALRGADVLGDLVLRGPIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHCCCEE
IAPPIEVAEAALPAPPRSAEPSAEAPAGLAGAIADVEAGRRGGLEQVRRLAEAGQPRAQM
EECCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH
YLAKLYETGRGGLEANSAEARRWTARAAERGDPIAQHNLALYLLEGRGGPRDEAMAARLF
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCEEEEEEECCCCCHHHHHHHHHH
RRAAVAGVGDSQVNLGLLYETGAGVDRNLVEAYKWFQIAAQNGDLRARARAVALEERLSR
HHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RELAAADRVVGRFAAGGEPPRETVLVPGAATVAESQQKLARLGFYIGPTDGRETESYREA
HHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHH
VEAYRRSQAPEIARVSVAGP
HHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure 
TRGNVSPADEAAIEPAEDGRQALHDLFDRLRAHVRRTGADAIPQGPEERRRAARDLRSL
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
SAELKGWERALETRLDRADDGWSLALASLQRDVAAGVRRLESEIAQSEAQLDAVLAGFQG
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RVGRWEAASADGERRFAETAARDLERAEGRRARQFAEFVRAVDQTPVVDLGERPRSVPEG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
EAARGPRRRSRSAALLLSAGVACVGLSTLAIVLEPPMSLPVEALRGADVLGDLVLRGPIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHCCCEE
IAPPIEVAEAALPAPPRSAEPSAEAPAGLAGAIADVEAGRRGGLEQVRRLAEAGQPRAQM
EECCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH
YLAKLYETGRGGLEANSAEARRWTARAAERGDPIAQHNLALYLLEGRGGPRDEAMAARLF
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCEEEEEEECCCCCHHHHHHHHHH
RRAAVAGVGDSQVNLGLLYETGAGVDRNLVEAYKWFQIAAQNGDLRARARAVALEERLSR
HHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RELAAADRVVGRFAAGGEPPRETVLVPGAATVAESQQKLARLGFYIGPTDGRETESYREA
HHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHH
VEAYRRSQAPEIARVSVAGP
HHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12370432 [H]