| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105013
Identifier: 197105013
GI number: 197105013
Start: 1749432
End: 1750460
Strand: Reverse
Name: 197105013
Synonym: PHZ_c1550
Alternate gene names: NA
Gene position: 1750460-1749432 (Counterclockwise)
Preceding gene: 197105014
Following gene: 197105012
Centisome position: 43.8
GC content: 68.03
Gene sequence:
>1029_bases TTGTCCGTTCAGCGTAATACCCTCCCCGGCCGCAGGAAGTTCATGCAACTGAGACTTGCAATTCAGGTGATGCTGATTGC ATTGCTTGGGCAGGCCGGCGCGGCCCAGGCCCAGACGTTCGGGCTGGGGATCACCGCGTCCCGCCCGGACCTCGGCAGCG TGACCTCGGCCGACGTCGGCGACACCGTCTTCCGGGTGGACGCCGCCACCGGCGCCATCAGCAAGGTCAGCGGCGGCGGC GCCCGTCTGGGCACGGGCACGTCGGTGGTGACCGTCACCGTCACCTGCGGGAACCAGAACGCCTGCAACTCGCGGACCCT GAACGGGACGATCTCGGCCGTCGGCACGCCGACCGGGCGCGCCGGCCCGATGACCAACTTCGACCTGGCGGGATCGGTCA TCTCCAACGAGAGCGGCTCGAACCCGCGGACGTTCAGGGTCGGCGCCATCGGAAAGAACTCGTCGAAGACCTTCACCGTC GGCATGGACTTCCCCATCAAGGGCGACAACGCCGGCGGCGGAACGAACGCGGCCCAGTCGTCCTTCACGATCACCCTGAC GCCCAACGGCTCAGGGAACACCGTCTCGAAGACCGGGACGGGCCTGGCGACGGTCTATCGGTCGCTCGGCATCGCCAAGA ACAGCGACCTGTCCTTCGGCCGGATCGTGCGCCCCGGCAGCGGCAATGGCACGGTCACGATCAACGCCATCACCGGCCTG CGCAGCCTGGGCGGCGCGGCGGTGGGACTGCCGACCCCCTCTCCCTCGCGGGCCAACTACACCGTCTCTGGCGAAGGCGG GCGAACCTTGTCGGTCACCATCCCCTCCTCGATCGTCATGACCCGCGAGGGCGGGACCGAGACGCTTACGGTGACCACGA CGAACACCGCCTCGACCCCCAAGCTGAGCTCGATCCTGGGCATGGCGGGAACCTACACCTTCTCGGTCGGCGGCTCGTTC CCGCTGGACAGCACGACGGCGTCGGGCGCCTACAGCGGCGTCTTCAACGTATCGGTGGCGTACAACTGA
Upstream 100 bases:
>100_bases ACGTGCAGGGTGAAGTCCTCTTCGAGCCGCGCCCTGAGGACGTCGAGCAGACGTCAAGCACGTTGGAAGATGCGGCAGCT TAGTATAGAGGCCTCCCAAC
Downstream 100 bases:
>100_bases GGACGGCAGGCTTCTTGCTGACCCGTCCTCCGAAATCGGCGTCGCCGCGGCGGCGCAGCGGCCGTTGAGGGCCGGACTGT ACCAATTTGGGGCTAGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSVQRNTLPGRRKFMQLRLAIQVMLIALLGQAGAAQAQTFGLGITASRPDLGSVTSADVGDTVFRVDAATGAISKVSGGG ARLGTGTSVVTVTVTCGNQNACNSRTLNGTISAVGTPTGRAGPMTNFDLAGSVISNESGSNPRTFRVGAIGKNSSKTFTV GMDFPIKGDNAGGGTNAAQSSFTITLTPNGSGNTVSKTGTGLATVYRSLGIAKNSDLSFGRIVRPGSGNGTVTINAITGL RSLGGAAVGLPTPSPSRANYTVSGEGGRTLSVTIPSSIVMTREGGTETLTVTTTNTASTPKLSSILGMAGTYTFSVGGSF PLDSTTASGAYSGVFNVSVAYN
Sequences:
>Translated_342_residues MSVQRNTLPGRRKFMQLRLAIQVMLIALLGQAGAAQAQTFGLGITASRPDLGSVTSADVGDTVFRVDAATGAISKVSGGG ARLGTGTSVVTVTVTCGNQNACNSRTLNGTISAVGTPTGRAGPMTNFDLAGSVISNESGSNPRTFRVGAIGKNSSKTFTV GMDFPIKGDNAGGGTNAAQSSFTITLTPNGSGNTVSKTGTGLATVYRSLGIAKNSDLSFGRIVRPGSGNGTVTINAITGL RSLGGAAVGLPTPSPSRANYTVSGEGGRTLSVTIPSSIVMTREGGTETLTVTTTNTASTPKLSSILGMAGTYTFSVGGSF PLDSTTASGAYSGVFNVSVAYN >Mature_341_residues SVQRNTLPGRRKFMQLRLAIQVMLIALLGQAGAAQAQTFGLGITASRPDLGSVTSADVGDTVFRVDAATGAISKVSGGGA RLGTGTSVVTVTVTCGNQNACNSRTLNGTISAVGTPTGRAGPMTNFDLAGSVISNESGSNPRTFRVGAIGKNSSKTFTVG MDFPIKGDNAGGGTNAAQSSFTITLTPNGSGNTVSKTGTGLATVYRSLGIAKNSDLSFGRIVRPGSGNGTVTINAITGLR SLGGAAVGLPTPSPSRANYTVSGEGGRTLSVTIPSSIVMTREGGTETLTVTTTNTASTPKLSSILGMAGTYTFSVGGSFP LDSTTASGAYSGVFNVSVAYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34231; Mature: 34100
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQRNTLPGRRKFMQLRLAIQVMLIALLGQAGAAQAQTFGLGITASRPDLGSVTSADVG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCC DTVFRVDAATGAISKVSGGGARLGTGTSVVTVTVTCGNQNACNSRTLNGTISAVGTPTGR CEEEEEECCCCCCEECCCCCCEECCCCEEEEEEEEECCCCCCCCEECCEEEEEECCCCCC AGPMTNFDLAGSVISNESGSNPRTFRVGAIGKNSSKTFTVGMDFPIKGDNAGGGTNAAQS CCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCEEEEEECCEECCCCCCCCCCCCCC SFTITLTPNGSGNTVSKTGTGLATVYRSLGIAKNSDLSFGRIVRPGSGNGTVTINAITGL EEEEEECCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEEEEECCH RSLGGAAVGLPTPSPSRANYTVSGEGGRTLSVTIPSSIVMTREGGTETLTVTTTNTASTP HHCCCEEEECCCCCCCCCEEEEECCCCCEEEEEECCEEEEEECCCCEEEEEEECCCCCCC KLSSILGMAGTYTFSVGGSFPLDSTTASGAYSGVFNVSVAYN HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEC >Mature Secondary Structure SVQRNTLPGRRKFMQLRLAIQVMLIALLGQAGAAQAQTFGLGITASRPDLGSVTSADVG CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCC DTVFRVDAATGAISKVSGGGARLGTGTSVVTVTVTCGNQNACNSRTLNGTISAVGTPTGR CEEEEEECCCCCCEECCCCCCEECCCCEEEEEEEEECCCCCCCCEECCEEEEEECCCCCC AGPMTNFDLAGSVISNESGSNPRTFRVGAIGKNSSKTFTVGMDFPIKGDNAGGGTNAAQS CCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCEEEEEECCEECCCCCCCCCCCCCC SFTITLTPNGSGNTVSKTGTGLATVYRSLGIAKNSDLSFGRIVRPGSGNGTVTINAITGL EEEEEECCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEEEEECCH RSLGGAAVGLPTPSPSRANYTVSGEGGRTLSVTIPSSIVMTREGGTETLTVTTTNTASTP HHCCCEEEECCCCCCCCCEEEEECCCCCEEEEEECCEEEEEECCCCEEEEEEECCCCCCC KLSSILGMAGTYTFSVGGSFPLDSTTASGAYSGVFNVSVAYN HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA