| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104997
Identifier: 197104997
GI number: 197104997
Start: 1734079
End: 1734849
Strand: Direct
Name: 197104997
Synonym: PHZ_c1534
Alternate gene names: NA
Gene position: 1734079-1734849 (Clockwise)
Preceding gene: 197104996
Following gene: 197104998
Centisome position: 43.39
GC content: 71.98
Gene sequence:
>771_bases GTGACGGATCTGTTCGAAGAGGTCGAGGAGCAGCTTCGCTCCGACCGCTACCGGTCGCTCGCGCGCCGGACTCTCCCCTG GATCCTGGCCGCCGTCGCGCTCGTCCTGGTGGCCGTCCTCGCCTACTGGGGCTGGGACACTTGGCGCAGCCGTGAGGTCG CCAAGGCCTCGGAGCAGTATCAGGCCGCGGGCGAGGCCCTGGCGGCCGGGGACCGCGCCAAGGCCCAACAGCTGTGGACC GAGGTCTCCCAGTCCTCCGCCGGCGGGTACAAGTCGCTGGCCCTGATGCAGCTGGGCGCCCTGAACCTCGACGAGAACAA GACGGACGAGGCCGTGAAGCTGTTCGACCAGGCGGCGAGCGCCGCGCCGGACGAGCTGATCGGCGACGCCGCCCGCCTCA AATCCGCCTTCGCCGTGCTCGACACGGCTCCCTACAAGGACGTGGAGGCGCGCTTGACGCCGCTGATCAAGGACGGCCGC CCCTACCGGGTGCAGGCGCGCGAGGCGCTCGCCTTCGCCAAGCTGATGGCCGGAGACACTGCCGGCGCCCGCGGGGACTT CGTCGTGCTGCAGCAGATGCTGGACGCCTCGGACGGGGTCCGCGCCCGCGCCCAGGCCGCGATCAGCCTGATCGATTCCG GCTCGGCCAAGGCCCTGCCGGGCGTCGTCAAGCAGGCCGCCGCCATGCCGCCCCCCATGATGGTGCAGCCCGGCGCCGTG CTCGGCGCTGACGGCGCTGCGCCGCAACCGCAAGCCAACGGACCGCAATGA
Upstream 100 bases:
>100_bases ACTTCGCCAAGGCGGGGTAGCGTTGCGGCTGAGGGCGGCGCGCTATAGGTTCCCGGCCTCTGCCCCAAGGGCCAGCTAAA GAGTCCGGAGTCCCCTTCAC
Downstream 100 bases:
>100_bases CGTCGCGCCGCAACACTCTCCTGGCCGTCTGCCTCATCGCCGCGCTGGGCGCGAGCGGCTGCTCGACGCTGGGACGCCTG AACCCGTTCGACCGCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTDLFEEVEEQLRSDRYRSLARRTLPWILAAVALVLVAVLAYWGWDTWRSREVAKASEQYQAAGEALAAGDRAKAQQLWT EVSQSSAGGYKSLALMQLGALNLDENKTDEAVKLFDQAASAAPDELIGDAARLKSAFAVLDTAPYKDVEARLTPLIKDGR PYRVQAREALAFAKLMAGDTAGARGDFVVLQQMLDASDGVRARAQAAISLIDSGSAKALPGVVKQAAAMPPPMMVQPGAV LGADGAAPQPQANGPQ
Sequences:
>Translated_256_residues MTDLFEEVEEQLRSDRYRSLARRTLPWILAAVALVLVAVLAYWGWDTWRSREVAKASEQYQAAGEALAAGDRAKAQQLWT EVSQSSAGGYKSLALMQLGALNLDENKTDEAVKLFDQAASAAPDELIGDAARLKSAFAVLDTAPYKDVEARLTPLIKDGR PYRVQAREALAFAKLMAGDTAGARGDFVVLQQMLDASDGVRARAQAAISLIDSGSAKALPGVVKQAAAMPPPMMVQPGAV LGADGAAPQPQANGPQ >Mature_255_residues TDLFEEVEEQLRSDRYRSLARRTLPWILAAVALVLVAVLAYWGWDTWRSREVAKASEQYQAAGEALAAGDRAKAQQLWTE VSQSSAGGYKSLALMQLGALNLDENKTDEAVKLFDQAASAAPDELIGDAARLKSAFAVLDTAPYKDVEARLTPLIKDGRP YRVQAREALAFAKLMAGDTAGARGDFVVLQQMLDASDGVRARAQAAISLIDSGSAKALPGVVKQAAAMPPPMMVQPGAVL GADGAAPQPQANGPQ
Specific function: Unknown
COG id: COG4649
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27223; Mature: 27092
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLFEEVEEQLRSDRYRSLARRTLPWILAAVALVLVAVLAYWGWDTWRSREVAKASEQY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QAAGEALAAGDRAKAQQLWTEVSQSSAGGYKSLALMQLGALNLDENKTDEAVKLFDQAAS HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH AAPDELIGDAARLKSAFAVLDTAPYKDVEARLTPLIKDGRPYRVQAREALAFAKLMAGDT CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC AGARGDFVVLQQMLDASDGVRARAQAAISLIDSGSAKALPGVVKQAAAMPPPMMVQPGAV CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCCCE LGADGAAPQPQANGPQ ECCCCCCCCCCCCCCC >Mature Secondary Structure TDLFEEVEEQLRSDRYRSLARRTLPWILAAVALVLVAVLAYWGWDTWRSREVAKASEQY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QAAGEALAAGDRAKAQQLWTEVSQSSAGGYKSLALMQLGALNLDENKTDEAVKLFDQAAS HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH AAPDELIGDAARLKSAFAVLDTAPYKDVEARLTPLIKDGRPYRVQAREALAFAKLMAGDT CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC AGARGDFVVLQQMLDASDGVRARAQAAISLIDSGSAKALPGVVKQAAAMPPPMMVQPGAV CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCCCE LGADGAAPQPQANGPQ ECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA