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The map label for this gene is trbE [H]

Identifier: 197104978

GI number: 197104978

Start: 1717836

End: 1720286

Strand: Direct

Name: trbE [H]

Synonym: PHZ_c1515

Alternate gene names: 197104978

Gene position: 1717836-1720286 (Clockwise)

Preceding gene: 197104977

Following gene: 197104979

Centisome position: 42.99

GC content: 69.52

Gene sequence:

>2451_bases
ATGTTCGATCTTCGCGAGTACCGCCGGCGTGCGGCCCAGCTTCCCGACTTTCTGCCGTGGGCGGCGCTCGTCGAGCCGGG
CGTGGTGCTCAATAAGGACGGGGGGTTTCAGCGCACAGCGCGCTTCCGCGGGCCCGACCTGGACTCGGCGACCGCGTCCG
AGCTCGTCTCGGCCGCGGGGCGGCTGAACAATGCGCTGCGACGCCTCGGGTCCGGCTGGGCCGTGTTCGTCGAAGCCCAG
CGCAATGCGGCCGACGTGTATCCGCTTAGCGACTTCCCCGACCCGGTGTCGGCGCTGGTGGACGAGGAGCGCCGGGCTCA
GTTCGAGGAACATGGAGCGCATTTCGACAGCGCCTACTTCCTGACCTTCGTCTTCCTGCCGCCCGCCGAGAACACCGCCC
GGGCTGAGTCCTGGCTGTACGAGGGGCGAGAGCGCCGCGGCGTCGACTGGCGCGAGGCGCTGGCCGGCTTCGTCGACCGG
ACGGATCGTGTGCTGGCGCTGCTCGAAGGCTTTGTGCCCGAAGCGGAGTGGCTCACCGACGCCGAGACCCTGACCTACCT
GCATTCGACGGTGTCGACCCACCGCCACCGCGTCGGCGTGCCGGACACGCCCATGCATCTGGATGTGCTGCTGGCCGACC
AGCCGCTCACCGGCGGCCTCGAGCCGCGGCTGGGAACGGCGCACCTGCGGGTGCTGACCATCAGCGGCTTCCCGGCCGCC
ACCTGGCCCGGGCTGCTCGACGACCTCAATCGCCTGGCGTTTCCCTACCGCTGGTCCACGCGCGCGATCTGCCTGGACAA
GGTCGACGCGGCCAAGCTGCTGGGCCGGATCCGCCGCCAATGGTTCGCCAAGCGCAAGTCGATCATGGCGATACTGAAAG
AGGTGCTGACCAACGAAGCCGCGGCGCTGGTCGACACCGACGCTCAGAACAAGGCGCTCGATGCCGACGAGGCCCTACAG
GACCTGGGCGCCGACGTGGTCGGGCATGCCTTCGTGACCGCCACGGTGTGCGTCTGGGACGAGGACGCGGGCCGCGCCGA
CGCGAAGCTGCGGCTGGTCGAGAAGGCAATCCAGGCCCGCGACTTCACCTGTATGGTTGAGAGCATCAACGCGGTGGAAG
CCTGGCTCGGCAGCCTTCCGGGCCACGCCTACGCCAATGTGCGCCAGCCGCCGATCTCCACCCTGAACCTGGCCCACATG
ATCCCGCTTTCGGCGGTGTGGGCTGGGCCGCAGCGGAACGCGCACCTGAACGGGCCGCCGCTGTTCTTCGCCCAGACGGA
AGGCTCGACACCCTTCAGGTTCTCGACCCACGTCGGGGACGTCGGCCACAGCATGGTGGTGGGGCCGACCGGGGCAGGGA
AGAGCGTGCTGTTGGCGCTGATGGCCCTGCAGTTCCGCCGCTACCCCGCCGGCCAGGTCTTCGCCTTCGACTTCGGCGGC
TCGATCCGAGCCGCGGCGCTGGCGATGGGCGGCGACTTCCACGATCTCGGCGGAGCGCTCGCGGACGATGAGACTCCGCC
GGTCGCCCTGCAGCCGCTGGGCCGCATCCAAGATCTGGCTGAACGCGCGTGGGCTTCGGAGTGGCTGGCCGGCGTGCTGG
CCCGAGAAGGTGTCGCGGTTACGCCTGAGGTGAAGGAGCATCTCTGGACCGCGCTCGGATCGCTGGCCTCGGCCCCCGAG
GCCGAGCGGACCCTCACCGGCCTGTCGGTCCTGCTGCAGTCCAACGCGCTCAAGCGCGCCCTTCAGCCCTACACCGTCGC
GGGTCCGTGGGGTCGGCTCCTCGACGCAGAGAGCGAGCGCCTGGGTTCGGCCTCCGTGCAGGCGTTCGAGACCGAGGGGC
TCGTGGGCTCGGCGGCGGCGCCGGCCGTGCTCAGCTACCTGTTCCATCGAATCCAGTCGCGGCTCGATGGGCGCCCGACC
CTGGTGGTGGTCGACGAAGGCTGGCTCGCCCTCGACGACGCCACCTTCGGAGCCCAGCTGCGGGAATGGCTGAAGACGCT
GCGCAAGAAGAACGCCTCCGTGGTGTTCGCCACCCAGTCCCTGGCCGACATTGAGACGAGCGCGATCGCAGCCTCGATCA
TCGAAAGCTGCCCCACCCGCATCTTCCTGCCGAACGACCGCGCGCAGGAGCCGCAGATCGCAGCGGCCTACGCGAGGTTC
GGTCTCAACGAGCGGCAGGTGGAGATCCTGGGTCGGGCGATCCCGAAGCGCGACTACTACTGCCAGTCCCGTCGCGGGAA
CCGGCTCTTCGAGCTCGGGCTAGGGCCGGTGGCGCTCGCCTTCTGCGCCGCTTCCGCCAAGGCGGACCAGCTGGTGATCG
CCGAGCTTCTTGAACACCACGGCCCGGGTGGGTTCGCGGCCGCTTGGCTCGAACACCGGGGGCTTCCGTGGGCGGCGGAC
CTGATCCGCTTGCAGGCCAAAGCGCCACCTCAATTGGAGACCGCTCGATGA

Upstream 100 bases:

>100_bases
GGCCACGCCTTCGCCGTCTGGGCCGCCAAGCGCGACCCCCACTTCGTCGAGGTGGTGCGGCGGCACGTCCGCATCCCGCC
CTATCTGGGAATCTGACGCG

Downstream 100 bases:

>100_bases
AGACCCGCACCCCTTGGCTGGCGGCGCTCGTGTGCTCGACCAGCCTCGTTCTGGCCTTGCCCACCCCAGCCGGGGCGCAG
CTCACCGTCTATGACCCAAC

Product: conjugal transfer ATPase TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 816; Mature: 816

Protein sequence:

>816_residues
MFDLREYRRRAAQLPDFLPWAALVEPGVVLNKDGGFQRTARFRGPDLDSATASELVSAAGRLNNALRRLGSGWAVFVEAQ
RNAADVYPLSDFPDPVSALVDEERRAQFEEHGAHFDSAYFLTFVFLPPAENTARAESWLYEGRERRGVDWREALAGFVDR
TDRVLALLEGFVPEAEWLTDAETLTYLHSTVSTHRHRVGVPDTPMHLDVLLADQPLTGGLEPRLGTAHLRVLTISGFPAA
TWPGLLDDLNRLAFPYRWSTRAICLDKVDAAKLLGRIRRQWFAKRKSIMAILKEVLTNEAAALVDTDAQNKALDADEALQ
DLGADVVGHAFVTATVCVWDEDAGRADAKLRLVEKAIQARDFTCMVESINAVEAWLGSLPGHAYANVRQPPISTLNLAHM
IPLSAVWAGPQRNAHLNGPPLFFAQTEGSTPFRFSTHVGDVGHSMVVGPTGAGKSVLLALMALQFRRYPAGQVFAFDFGG
SIRAAALAMGGDFHDLGGALADDETPPVALQPLGRIQDLAERAWASEWLAGVLAREGVAVTPEVKEHLWTALGSLASAPE
AERTLTGLSVLLQSNALKRALQPYTVAGPWGRLLDAESERLGSASVQAFETEGLVGSAAAPAVLSYLFHRIQSRLDGRPT
LVVVDEGWLALDDATFGAQLREWLKTLRKKNASVVFATQSLADIETSAIAASIIESCPTRIFLPNDRAQEPQIAAAYARF
GLNERQVEILGRAIPKRDYYCQSRRGNRLFELGLGPVALAFCAASAKADQLVIAELLEHHGPGGFAAAWLEHRGLPWAAD
LIRLQAKAPPQLETAR

Sequences:

>Translated_816_residues
MFDLREYRRRAAQLPDFLPWAALVEPGVVLNKDGGFQRTARFRGPDLDSATASELVSAAGRLNNALRRLGSGWAVFVEAQ
RNAADVYPLSDFPDPVSALVDEERRAQFEEHGAHFDSAYFLTFVFLPPAENTARAESWLYEGRERRGVDWREALAGFVDR
TDRVLALLEGFVPEAEWLTDAETLTYLHSTVSTHRHRVGVPDTPMHLDVLLADQPLTGGLEPRLGTAHLRVLTISGFPAA
TWPGLLDDLNRLAFPYRWSTRAICLDKVDAAKLLGRIRRQWFAKRKSIMAILKEVLTNEAAALVDTDAQNKALDADEALQ
DLGADVVGHAFVTATVCVWDEDAGRADAKLRLVEKAIQARDFTCMVESINAVEAWLGSLPGHAYANVRQPPISTLNLAHM
IPLSAVWAGPQRNAHLNGPPLFFAQTEGSTPFRFSTHVGDVGHSMVVGPTGAGKSVLLALMALQFRRYPAGQVFAFDFGG
SIRAAALAMGGDFHDLGGALADDETPPVALQPLGRIQDLAERAWASEWLAGVLAREGVAVTPEVKEHLWTALGSLASAPE
AERTLTGLSVLLQSNALKRALQPYTVAGPWGRLLDAESERLGSASVQAFETEGLVGSAAAPAVLSYLFHRIQSRLDGRPT
LVVVDEGWLALDDATFGAQLREWLKTLRKKNASVVFATQSLADIETSAIAASIIESCPTRIFLPNDRAQEPQIAAAYARF
GLNERQVEILGRAIPKRDYYCQSRRGNRLFELGLGPVALAFCAASAKADQLVIAELLEHHGPGGFAAAWLEHRGLPWAAD
LIRLQAKAPPQLETAR
>Mature_816_residues
MFDLREYRRRAAQLPDFLPWAALVEPGVVLNKDGGFQRTARFRGPDLDSATASELVSAAGRLNNALRRLGSGWAVFVEAQ
RNAADVYPLSDFPDPVSALVDEERRAQFEEHGAHFDSAYFLTFVFLPPAENTARAESWLYEGRERRGVDWREALAGFVDR
TDRVLALLEGFVPEAEWLTDAETLTYLHSTVSTHRHRVGVPDTPMHLDVLLADQPLTGGLEPRLGTAHLRVLTISGFPAA
TWPGLLDDLNRLAFPYRWSTRAICLDKVDAAKLLGRIRRQWFAKRKSIMAILKEVLTNEAAALVDTDAQNKALDADEALQ
DLGADVVGHAFVTATVCVWDEDAGRADAKLRLVEKAIQARDFTCMVESINAVEAWLGSLPGHAYANVRQPPISTLNLAHM
IPLSAVWAGPQRNAHLNGPPLFFAQTEGSTPFRFSTHVGDVGHSMVVGPTGAGKSVLLALMALQFRRYPAGQVFAFDFGG
SIRAAALAMGGDFHDLGGALADDETPPVALQPLGRIQDLAERAWASEWLAGVLAREGVAVTPEVKEHLWTALGSLASAPE
AERTLTGLSVLLQSNALKRALQPYTVAGPWGRLLDAESERLGSASVQAFETEGLVGSAAAPAVLSYLFHRIQSRLDGRPT
LVVVDEGWLALDDATFGAQLREWLKTLRKKNASVVFATQSLADIETSAIAASIIESCPTRIFLPNDRAQEPQIAAAYARF
GLNERQVEILGRAIPKRDYYCQSRRGNRLFELGLGPVALAFCAASAKADQLVIAELLEHHGPGGFAAAWLEHRGLPWAAD
LIRLQAKAPPQLETAR

Specific function: Unknown

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 88936; Mature: 88936

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLREYRRRAAQLPDFLPWAALVEPGVVLNKDGGFQRTARFRGPDLDSATASELVSAAG
CCCHHHHHHHHHCCCCCCCHHHHHCCCEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHH
RLNNALRRLGSGWAVFVEAQRNAADVYPLSDFPDPVSALVDEERRAQFEEHGAHFDSAYF
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHCCCCCCCEEE
LTFVFLPPAENTARAESWLYEGRERRGVDWREALAGFVDRTDRVLALLEGFVPEAEWLTD
EEEEEECCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
AETLTYLHSTVSTHRHRVGVPDTPMHLDVLLADQPLTGGLEPRLGTAHLRVLTISGFPAA
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCC
TWPGLLDDLNRLAFPYRWSTRAICLDKVDAAKLLGRIRRQWFAKRKSIMAILKEVLTNEA
CCCHHHHHHHHHCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AALVDTDAQNKALDADEALQDLGADVVGHAFVTATVCVWDEDAGRADAKLRLVEKAIQAR
CEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHC
DFTCMVESINAVEAWLGSLPGHAYANVRQPPISTLNLAHMIPLSAVWAGPQRNAHLNGPP
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCE
LFFAQTEGSTPFRFSTHVGDVGHSMVVGPTGAGKSVLLALMALQFRRYPAGQVFAFDFGG
EEEEECCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCC
SIRAAALAMGGDFHDLGGALADDETPPVALQPLGRIQDLAERAWASEWLAGVLAREGVAV
CHHHHHHHHCCCHHHHCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
TPEVKEHLWTALGSLASAPEAERTLTGLSVLLQSNALKRALQPYTVAGPWGRLLDAESER
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHCCHHHH
LGSASVQAFETEGLVGSAAAPAVLSYLFHRIQSRLDGRPTLVVVDEGWLALDDATFGAQL
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCHHHHHH
REWLKTLRKKNASVVFATQSLADIETSAIAASIIESCPTRIFLPNDRAQEPQIAAAYARF
HHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHH
GLNERQVEILGRAIPKRDYYCQSRRGNRLFELGLGPVALAFCAASAKADQLVIAELLEHH
CCCHHHHHHHHHHCCCCCCCHHCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHC
GPGGFAAAWLEHRGLPWAADLIRLQAKAPPQLETAR
CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFDLREYRRRAAQLPDFLPWAALVEPGVVLNKDGGFQRTARFRGPDLDSATASELVSAAG
CCCHHHHHHHHHCCCCCCCHHHHHCCCEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHH
RLNNALRRLGSGWAVFVEAQRNAADVYPLSDFPDPVSALVDEERRAQFEEHGAHFDSAYF
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHCCCCCCCEEE
LTFVFLPPAENTARAESWLYEGRERRGVDWREALAGFVDRTDRVLALLEGFVPEAEWLTD
EEEEEECCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
AETLTYLHSTVSTHRHRVGVPDTPMHLDVLLADQPLTGGLEPRLGTAHLRVLTISGFPAA
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCC
TWPGLLDDLNRLAFPYRWSTRAICLDKVDAAKLLGRIRRQWFAKRKSIMAILKEVLTNEA
CCCHHHHHHHHHCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AALVDTDAQNKALDADEALQDLGADVVGHAFVTATVCVWDEDAGRADAKLRLVEKAIQAR
CEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHC
DFTCMVESINAVEAWLGSLPGHAYANVRQPPISTLNLAHMIPLSAVWAGPQRNAHLNGPP
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCE
LFFAQTEGSTPFRFSTHVGDVGHSMVVGPTGAGKSVLLALMALQFRRYPAGQVFAFDFGG
EEEEECCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCC
SIRAAALAMGGDFHDLGGALADDETPPVALQPLGRIQDLAERAWASEWLAGVLAREGVAV
CHHHHHHHHCCCHHHHCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
TPEVKEHLWTALGSLASAPEAERTLTGLSVLLQSNALKRALQPYTVAGPWGRLLDAESER
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHCCHHHH
LGSASVQAFETEGLVGSAAAPAVLSYLFHRIQSRLDGRPTLVVVDEGWLALDDATFGAQL
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCHHHHHH
REWLKTLRKKNASVVFATQSLADIETSAIAASIIESCPTRIFLPNDRAQEPQIAAAYARF
HHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHH
GLNERQVEILGRAIPKRDYYCQSRRGNRLFELGLGPVALAFCAASAKADQLVIAELLEHH
CCCHHHHHHHHHHCCCCCCCHHCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHC
GPGGFAAAWLEHRGLPWAADLIRLQAKAPPQLETAR
CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]