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The map label for this gene is yubM [H]

Identifier: 197104951

GI number: 197104951

Start: 1689119

End: 1691107

Strand: Direct

Name: yubM [H]

Synonym: PHZ_c1486

Alternate gene names: 197104951

Gene position: 1689119-1691107 (Clockwise)

Preceding gene: 197104950

Following gene: 197104953

Centisome position: 42.27

GC content: 70.99

Gene sequence:

>1989_bases
GTGCGCCTGCAACCTGCCCCAAGGAGCAAACCCATGAACGCCCAGGCTGTGATCGAGTCCGGTTCGGTGCTCGACATCCC
TCTCAACAAGCTCAAGAAGTCGTCCAAGAACGCCCGGAAGACCCCGCATGGCGAGGCGGCCATCGAAGCGCTGGCGGCCT
CCATCGCCGCCAAGGGCCTCCTGCAGGCCCCAGTGGTGGAGCCGGAAACGGGCGAGGACGGGGAGCCCACCGGCTTCTAT
CTGGTGACCATCGGCGAAGGGCGGCGGCTGGCGCTGCTCTTACGCGCCAAGCGCAAGGAAATCCGCAAGACCGAGCCGGT
GCGCTGCGTGGTGGACACCGCCAACGACCCGCACGAGATCAGTCTCGACGAGAACGTCACCCGCACCGACATGCACCCGG
CCGACCAGTTCGAGGCCTTCAGGCGGCTGAGCGACGAGCGCGGCTTGAGCGCCGAGGACATCGGCGCCCGGTTCGGGGTG
TCGGCCCATGTGGTGCGCCAGCGCCTGCGGCTGGGGGCCGTCTCGCCCAAGCTGATGGCGATCTACCGCGAGGACGGCCT
GACCCTGGACCAACTGATGGCCTTCGCCGTCAGCGAGGACCATGAGCGCCAGGAGCAGGTCTACGACCAGCTGTCGTGGA
ACCGCTCGGCGGCGCTGATCCGCCGCGCCATGACCGAGGCCAAGGTTCCGGCGACCGACCGCCGCGCGGTGTTCGTGGGC
ATGGATGCGTATGCGGCGGCGGGCGGCCAGACCCTGCGTGACCTTTTCACCGAGGACGGCGGCGGTTGGCTGGAAGACGC
CGCCCTGCTGGATCGACTGGCGAGCGAGAAGCTGGAGGCGATCGCGGCCGAGGTGCGCGAGCGGGAAGGCTGGAAGTGGG
CCACGGCCTGCCTGGACTACCCGCACGGCCATGGCTGGCGGCGGGTGTATCCGAGGCCGGTGGAGCGGGCCGCGGACGAG
GCGGCGCAGATCGCGGCGCTCTCGGAGGAATACGACGCTCTGGTCAGCCAGTGGGACGCGGTGGAGGACCTGCCGCCCGA
GGTGGAGGCGCGATTCAAGGAGATCGATGCGGCGCTGGACGTCTTCGGCGACGGCACGGCCTACGATCCCGACGAGGTCG
CGCGCGGCGGGGTGTTCGTGGTTCTCGGCCACGACGGTCAGGCACGTATCGAGCGGGGCCTGATCCGGCCCGAGGACGAG
GCGCCGGAGCCGAGCGCCGAAACGGAGGCGGACGGGGAGGGAGGCATCGCCGAACCGGGACACGACATCGGGACCGTGGA
CGACGAGCCCGAGTACGAGGGTGTGGCGCCGCTCTCCGAGCGACTGGTTCTGGACCTCACGGCCCACAAGACCATGGGGC
TGCGCGATGCGCTTGCCGCTAACCCGACCCTGGCGCTCACGGCGCTCGTGCACGCCCTGGCGCTCAAGACCTTCTACCCG
CCTTACGACCAGTCCTCCTGCGTGGAGGTGAAGCTGGTGTCGGCCTATCTGGACGGCCACGCCCCCGGCGTCAGCGAGAG
CCCGGCAGGGCGGCGGATCGCGGAGCGGCATGAGGGCTGGGCGCAGCGCTTGCCGCGCGAGAGCGGCGACGCCTGGGGCT
TCGTGGCAGGCCTGGACGGGGGCGAGCTTCTCGACCTGCTGGCGCACTGCGTCAGCCTGGGGGTCAACGCGGTGCGCAAC
CCCATGGACCGCAAGCCGGGGGCTTGGGCGCACGCCGAGGTGCTGGCGCAGGCGGCGGGCCTGGATATGACCCGCACCTG
GGCGCCCACGGTGGCGAGCTATCTCGGCCGGGTCACCAAGCCGCGCATCCTCGAAGCGGTGCGGGAGGCGGCCGGCGACG
ACGCCGCCGAGCGGATCGCCGGGCTCAAGAAAAGCGAGATGGCGGACGCCGCAGAGCCCCTGATCGCCGGAACCGGCTGG
GTGCCGCCGCTGCTGCGGACGGCGCAGGTCGAGGCCGCGCCCGAGGCTGTGCCCATGGCTGCGGAATAG

Upstream 100 bases:

>100_bases
CAGGAGGGCAGGGCCGTCAGGCCCTGCAGCCGGTTCCCCGCGAAGCCGCCCCTCCGCTTGCACACCCGGTCTCGCCGACG
GGCAAGGCCGCAGGCGCGGC

Downstream 100 bases:

>100_bases
TCAGCGTTCCGACCTTTGAAGCCCACGCGGGTTGGCCCGCGTGGGCTTTGTCTTTGTCCGCTCAGGCGTTGTCGGTGTCG
CGCCCGTCCGGCTCCTTGGC

Product: predicted transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MRLQPAPRSKPMNAQAVIESGSVLDIPLNKLKKSSKNARKTPHGEAAIEALAASIAAKGLLQAPVVEPETGEDGEPTGFY
LVTIGEGRRLALLLRAKRKEIRKTEPVRCVVDTANDPHEISLDENVTRTDMHPADQFEAFRRLSDERGLSAEDIGARFGV
SAHVVRQRLRLGAVSPKLMAIYREDGLTLDQLMAFAVSEDHERQEQVYDQLSWNRSAALIRRAMTEAKVPATDRRAVFVG
MDAYAAAGGQTLRDLFTEDGGGWLEDAALLDRLASEKLEAIAAEVREREGWKWATACLDYPHGHGWRRVYPRPVERAADE
AAQIAALSEEYDALVSQWDAVEDLPPEVEARFKEIDAALDVFGDGTAYDPDEVARGGVFVVLGHDGQARIERGLIRPEDE
APEPSAETEADGEGGIAEPGHDIGTVDDEPEYEGVAPLSERLVLDLTAHKTMGLRDALAANPTLALTALVHALALKTFYP
PYDQSSCVEVKLVSAYLDGHAPGVSESPAGRRIAERHEGWAQRLPRESGDAWGFVAGLDGGELLDLLAHCVSLGVNAVRN
PMDRKPGAWAHAEVLAQAAGLDMTRTWAPTVASYLGRVTKPRILEAVREAAGDDAAERIAGLKKSEMADAAEPLIAGTGW
VPPLLRTAQVEAAPEAVPMAAE

Sequences:

>Translated_662_residues
MRLQPAPRSKPMNAQAVIESGSVLDIPLNKLKKSSKNARKTPHGEAAIEALAASIAAKGLLQAPVVEPETGEDGEPTGFY
LVTIGEGRRLALLLRAKRKEIRKTEPVRCVVDTANDPHEISLDENVTRTDMHPADQFEAFRRLSDERGLSAEDIGARFGV
SAHVVRQRLRLGAVSPKLMAIYREDGLTLDQLMAFAVSEDHERQEQVYDQLSWNRSAALIRRAMTEAKVPATDRRAVFVG
MDAYAAAGGQTLRDLFTEDGGGWLEDAALLDRLASEKLEAIAAEVREREGWKWATACLDYPHGHGWRRVYPRPVERAADE
AAQIAALSEEYDALVSQWDAVEDLPPEVEARFKEIDAALDVFGDGTAYDPDEVARGGVFVVLGHDGQARIERGLIRPEDE
APEPSAETEADGEGGIAEPGHDIGTVDDEPEYEGVAPLSERLVLDLTAHKTMGLRDALAANPTLALTALVHALALKTFYP
PYDQSSCVEVKLVSAYLDGHAPGVSESPAGRRIAERHEGWAQRLPRESGDAWGFVAGLDGGELLDLLAHCVSLGVNAVRN
PMDRKPGAWAHAEVLAQAAGLDMTRTWAPTVASYLGRVTKPRILEAVREAAGDDAAERIAGLKKSEMADAAEPLIAGTGW
VPPLLRTAQVEAAPEAVPMAAE
>Mature_662_residues
MRLQPAPRSKPMNAQAVIESGSVLDIPLNKLKKSSKNARKTPHGEAAIEALAASIAAKGLLQAPVVEPETGEDGEPTGFY
LVTIGEGRRLALLLRAKRKEIRKTEPVRCVVDTANDPHEISLDENVTRTDMHPADQFEAFRRLSDERGLSAEDIGARFGV
SAHVVRQRLRLGAVSPKLMAIYREDGLTLDQLMAFAVSEDHERQEQVYDQLSWNRSAALIRRAMTEAKVPATDRRAVFVG
MDAYAAAGGQTLRDLFTEDGGGWLEDAALLDRLASEKLEAIAAEVREREGWKWATACLDYPHGHGWRRVYPRPVERAADE
AAQIAALSEEYDALVSQWDAVEDLPPEVEARFKEIDAALDVFGDGTAYDPDEVARGGVFVVLGHDGQARIERGLIRPEDE
APEPSAETEADGEGGIAEPGHDIGTVDDEPEYEGVAPLSERLVLDLTAHKTMGLRDALAANPTLALTALVHALALKTFYP
PYDQSSCVEVKLVSAYLDGHAPGVSESPAGRRIAERHEGWAQRLPRESGDAWGFVAGLDGGELLDLLAHCVSLGVNAVRN
PMDRKPGAWAHAEVLAQAAGLDMTRTWAPTVASYLGRVTKPRILEAVREAAGDDAAERIAGLKKSEMADAAEPLIAGTGW
VPPLLRTAQVEAAPEAVPMAAE

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 71606; Mature: 71606

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQPAPRSKPMNAQAVIESGSVLDIPLNKLKKSSKNARKTPHGEAAIEALAASIAAKGL
CCCCCCCCCCCCCHHHHCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LQAPVVEPETGEDGEPTGFYLVTIGEGRRLALLLRAKRKEIRKTEPVRCVVDTANDPHEI
HHCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCCEE
SLDENVTRTDMHPADQFEAFRRLSDERGLSAEDIGARFGVSAHVVRQRLRLGAVSPKLMA
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHEE
IYREDGLTLDQLMAFAVSEDHERQEQVYDQLSWNRSAALIRRAMTEAKVPATDRRAVFVG
EECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEE
MDAYAAAGGQTLRDLFTEDGGGWLEDAALLDRLASEKLEAIAAEVREREGWKWATACLDY
CHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCC
PHGHGWRRVYPRPVERAADEAAQIAALSEEYDALVSQWDAVEDLPPEVEARFKEIDAALD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VFGDGTAYDPDEVARGGVFVVLGHDGQARIERGLIRPEDEAPEPSAETEADGEGGIAEPG
HCCCCCCCCHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HDIGTVDDEPEYEGVAPLSERLVLDLTAHKTMGLRDALAANPTLALTALVHALALKTFYP
CCCCCCCCCCCCCCCCCCHHCEEEEEHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCC
PYDQSSCVEVKLVSAYLDGHAPGVSESPAGRRIAERHEGWAQRLPRESGDAWGFVAGLDG
CCCCCCCEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
GELLDLLAHCVSLGVNAVRNPMDRKPGAWAHAEVLAQAAGLDMTRTWAPTVASYLGRVTK
HHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PRILEAVREAAGDDAAERIAGLKKSEMADAAEPLIAGTGWVPPLLRTAQVEAAPEAVPMA
HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCCCCCC
AE
CC
>Mature Secondary Structure
MRLQPAPRSKPMNAQAVIESGSVLDIPLNKLKKSSKNARKTPHGEAAIEALAASIAAKGL
CCCCCCCCCCCCCHHHHCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LQAPVVEPETGEDGEPTGFYLVTIGEGRRLALLLRAKRKEIRKTEPVRCVVDTANDPHEI
HHCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCCEE
SLDENVTRTDMHPADQFEAFRRLSDERGLSAEDIGARFGVSAHVVRQRLRLGAVSPKLMA
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHEE
IYREDGLTLDQLMAFAVSEDHERQEQVYDQLSWNRSAALIRRAMTEAKVPATDRRAVFVG
EECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEE
MDAYAAAGGQTLRDLFTEDGGGWLEDAALLDRLASEKLEAIAAEVREREGWKWATACLDY
CHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCC
PHGHGWRRVYPRPVERAADEAAQIAALSEEYDALVSQWDAVEDLPPEVEARFKEIDAALD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VFGDGTAYDPDEVARGGVFVVLGHDGQARIERGLIRPEDEAPEPSAETEADGEGGIAEPG
HCCCCCCCCHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HDIGTVDDEPEYEGVAPLSERLVLDLTAHKTMGLRDALAANPTLALTALVHALALKTFYP
CCCCCCCCCCCCCCCCCCHHCEEEEEHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCC
PYDQSSCVEVKLVSAYLDGHAPGVSESPAGRRIAERHEGWAQRLPRESGDAWGFVAGLDG
CCCCCCCEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
GELLDLLAHCVSLGVNAVRNPMDRKPGAWAHAEVLAQAAGLDMTRTWAPTVASYLGRVTK
HHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PRILEAVREAAGDDAAERIAGLKKSEMADAAEPLIAGTGWVPPLLRTAQVEAAPEAVPMA
HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCCCCCC
AE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]