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The map label for this gene is cnrR [H]

Identifier: 197104939

GI number: 197104939

Start: 1676483

End: 1676923

Strand: Direct

Name: cnrR [H]

Synonym: PHZ_c1474

Alternate gene names: 197104939

Gene position: 1676483-1676923 (Clockwise)

Preceding gene: 197104937

Following gene: 197104940

Centisome position: 41.95

GC content: 69.39

Gene sequence:

>441_bases
ATGATCCTGTTCAACCGCGGCCTGCTGCTGACCATCCTGCTGGCCGTGCTGGCGGGCGCTGCGGGCGCCTGGCTCGCGGG
CCGCCACGTCGTCCAACGGCACCAGCAGCCCTCCCTGCACGCCTTCGTGCACGAGGAGCTGGCGCTCTCTTCCGAACAGG
AGCGCCGGCTGGAGGTGTTGGAACAGGACTTCGCGGTGCGTCGACACGCCCGCGAGGCCGAACTGCGCGCCGCGAACGCG
GAGCTCGCGGCGGCGATTCAGGCGCGCCACGAGTATTCGCCGGAGGTGCAGGCGGCCGTGGAGCATTTCCACCACGCCAT
GGGGGAGCTGCAGAAGGAGACCATCCTTCATGTCCTCGCCATGCGGACCGTGCTGACGCCCGAGCAGGCCGTGAAGTTCG
ATCGCCGCATCAGCGAGGCGCTGACCGACCAGGCCCTGTGA

Upstream 100 bases:

>100_bases
GGAGCCTCACCGCCGCCGCGGCCGCCGTCGAGCCGTCGGAGATCTCCGCCTTTTCGCTGCGTGCGGACCTCGCCCCCTCC
ACCCTGCTCGACGGCCCCGG

Downstream 100 bases:

>100_bases
GCGCCGCCGCAGACGAGAGCGACGCGGCGCTCGCGACCCGTGCGGCCGGTGGCGACGACCAGGCCTATGCCGCCCTGATG
CGGCGCCACAAGGCCAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MILFNRGLLLTILLAVLAGAAGAWLAGRHVVQRHQQPSLHAFVHEELALSSEQERRLEVLEQDFAVRRHAREAELRAANA
ELAAAIQARHEYSPEVQAAVEHFHHAMGELQKETILHVLAMRTVLTPEQAVKFDRRISEALTDQAL

Sequences:

>Translated_146_residues
MILFNRGLLLTILLAVLAGAAGAWLAGRHVVQRHQQPSLHAFVHEELALSSEQERRLEVLEQDFAVRRHAREAELRAANA
ELAAAIQARHEYSPEVQAAVEHFHHAMGELQKETILHVLAMRTVLTPEQAVKFDRRISEALTDQAL
>Mature_146_residues
MILFNRGLLLTILLAVLAGAAGAWLAGRHVVQRHQQPSLHAFVHEELALSSEQERRLEVLEQDFAVRRHAREAELRAANA
ELAAAIQARHEYSPEVQAAVEHFHHAMGELQKETILHVLAMRTVLTPEQAVKFDRRISEALTDQAL

Specific function: CnrH alone is able to activate cnr expression, while both CnrY and CrnR (CnrX) are needed for nickel induction of CnrH (PubMed:10671463). Has been suggested (PubMed:10671464) to bind nickel [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.xylosoxydans nccX [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16403; Mature: 16403

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILFNRGLLLTILLAVLAGAAGAWLAGRHVVQRHQQPSLHAFVHEELALSSEQERRLEVL
CEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHH
EQDFAVRRHAREAELRAANAELAAAIQARHEYSPEVQAAVEHFHHAMGELQKETILHVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MRTVLTPEQAVKFDRRISEALTDQAL
HHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILFNRGLLLTILLAVLAGAAGAWLAGRHVVQRHQQPSLHAFVHEELALSSEQERRLEVL
CEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHH
EQDFAVRRHAREAELRAANAELAAAIQARHEYSPEVQAAVEHFHHAMGELQKETILHVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MRTVLTPEQAVKFDRRISEALTDQAL
HHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8380802; 10671463; 10671464 [H]