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The map label for this gene is aapJ [H]

Identifier: 197104926

GI number: 197104926

Start: 1659883

End: 1660815

Strand: Reverse

Name: aapJ [H]

Synonym: PHZ_c1461

Alternate gene names: 197104926

Gene position: 1660815-1659883 (Counterclockwise)

Preceding gene: 197104927

Following gene: 197104925

Centisome position: 41.56

GC content: 70.85

Gene sequence:

>933_bases
ATGAAGGGCCGCGACTACGTCACCTGCGGGGCCAGCCAGGGGATCACCGGCCTCTCCCGGCCCGACGAGCGGGGCGTCTG
GCGCGGCTTCGACGTCGACGTCTGCCGCGCCTTCGCCGCGGCGCTGCTCGGCGACGCCCAGAAGATCCGCTTCATCCCGC
TCAACGCCGCGCAGCGGCTGCCCGCCTTGCAGACCGGCGAGATCGATGTGCTCTCGCGCACGACCACCATGACCTTCACC
CGGGACATGGCGGTGCGCTTCGTGACCGTCACCCAGTTCGACACCGACGTGCTGATCTTCCGCAAGCGCCTGGGGGCCGC
CTCGCCCGCGGACCTGAACGGCCGCACGGTCTGCCTGCAGAGCGGCGGCAGCTCCGCCGACAACACGCTCACCCGGGTGG
AGGCGGAGGCGAAGATCCGCTTCGAGCGGGTCTATTTCGACTCCACCATCACCGCCCGCGACGCCTACTTCTCGGCGCGC
TGCGACGTCTATGTCACCGACGGCTTCCTGGGCGCCAGCCAGGTGGCGACGGTGGCGCGCGACCCCGACGACCACGCCCT
CCTCTACCTGGACCACCTGCTGCCCCAGGGGGTCGCCATCGCCCGCGGCGACGATCGCTGGTTCGACGTCGTCCGCTGGA
CGGTGAATCTGTTGATCTGGGCCGAACAGAACGGCGTGACCCAGGCCAATGTGGACGAGCTGCGGCGCAGCGGCCCCGCC
GATGTGCGCCGCGTGCTCGGGGCCGACCCGGCCTTCGGCCGGGCCATCGGCCTGGAGCCGGACTGGGGCTACCAGGTCCT
CAAGCAGGTGGGGAACTACGGCGAGATCTGGGAGCGCAACCTCGGCGCCCGCACCCGCATCAAGGCCGACCGCCGCCTCA
ACCGGCCGTACAAGGACGGCGGCCTGCTGTTCCCCTATCCCTGGGACGTGTGA

Upstream 100 bases:

>100_bases
GGCGGCGAGACGGCGGCTGGCCGCGCTCGGACTGGTCGGTGTTCTGGCCGCCGCCTGCGCCCCCGGCGGAGCCGGGGAGG
AGCGCGGCGCGATCCCGCGC

Downstream 100 bases:

>100_bases
GCCGATGACGGCGCATTCCTCCGCCCCCCGACGCCCGCGCCGGGTCCCGGCCTCCCCCGCCGCCATCCTGGCGCAGGCCG
GCGCGGTCGCCCTGGTGGCG

Product: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKGRDYVTCGASQGITGLSRPDERGVWRGFDVDVCRAFAAALLGDAQKIRFIPLNAAQRLPALQTGEIDVLSRTTTMTFT
RDMAVRFVTVTQFDTDVLIFRKRLGAASPADLNGRTVCLQSGGSSADNTLTRVEAEAKIRFERVYFDSTITARDAYFSAR
CDVYVTDGFLGASQVATVARDPDDHALLYLDHLLPQGVAIARGDDRWFDVVRWTVNLLIWAEQNGVTQANVDELRRSGPA
DVRRVLGADPAFGRAIGLEPDWGYQVLKQVGNYGEIWERNLGARTRIKADRRLNRPYKDGGLLFPYPWDV

Sequences:

>Translated_310_residues
MKGRDYVTCGASQGITGLSRPDERGVWRGFDVDVCRAFAAALLGDAQKIRFIPLNAAQRLPALQTGEIDVLSRTTTMTFT
RDMAVRFVTVTQFDTDVLIFRKRLGAASPADLNGRTVCLQSGGSSADNTLTRVEAEAKIRFERVYFDSTITARDAYFSAR
CDVYVTDGFLGASQVATVARDPDDHALLYLDHLLPQGVAIARGDDRWFDVVRWTVNLLIWAEQNGVTQANVDELRRSGPA
DVRRVLGADPAFGRAIGLEPDWGYQVLKQVGNYGEIWERNLGARTRIKADRRLNRPYKDGGLLFPYPWDV
>Mature_310_residues
MKGRDYVTCGASQGITGLSRPDERGVWRGFDVDVCRAFAAALLGDAQKIRFIPLNAAQRLPALQTGEIDVLSRTTTMTFT
RDMAVRFVTVTQFDTDVLIFRKRLGAASPADLNGRTVCLQSGGSSADNTLTRVEAEAKIRFERVYFDSTITARDAYFSAR
CDVYVTDGFLGASQVATVARDPDDHALLYLDHLLPQGVAIARGDDRWFDVVRWTVNLLIWAEQNGVTQANVDELRRSGPA
DVRRVLGADPAFGRAIGLEPDWGYQVLKQVGNYGEIWERNLGARTRIKADRRLNRPYKDGGLLFPYPWDV

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 34511; Mature: 34511

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRDYVTCGASQGITGLSRPDERGVWRGFDVDVCRAFAAALLGDAQKIRFIPLNAAQRL
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHC
PALQTGEIDVLSRTTTMTFTRDMAVRFVTVTQFDTDVLIFRKRLGAASPADLNGRTVCLQ
CCCCCCCEEEEECEEEEEEEECCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEE
SGGSSADNTLTRVEAEAKIRFERVYFDSTITARDAYFSARCDVYVTDGFLGASQVATVAR
CCCCCCCCCEEEEEHHHEEEEEEEEECCCEEECCCEEEEECEEEEECCCCCHHHHHHHHC
DPDDHALLYLDHLLPQGVAIARGDDRWFDVVRWTVNLLIWAEQNGVTQANVDELRRSGPA
CCCCCEEEEEHHHCCCCEEEECCCCHHHHHHEEEEEEEEEECCCCCCCCCHHHHHCCCHH
DVRRVLGADPAFGRAIGLEPDWGYQVLKQVGNYGEIWERNLGARTRIKADRRLNRPYKDG
HHHHHHCCCCCCCCEECCCCCHHHHHHHHHCCCHHHHHHCCCCCCEECHHHHCCCCCCCC
GLLFPYPWDV
CEECCCCCCC
>Mature Secondary Structure
MKGRDYVTCGASQGITGLSRPDERGVWRGFDVDVCRAFAAALLGDAQKIRFIPLNAAQRL
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHC
PALQTGEIDVLSRTTTMTFTRDMAVRFVTVTQFDTDVLIFRKRLGAASPADLNGRTVCLQ
CCCCCCCEEEEECEEEEEEEECCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEE
SGGSSADNTLTRVEAEAKIRFERVYFDSTITARDAYFSARCDVYVTDGFLGASQVATVAR
CCCCCCCCCEEEEEHHHEEEEEEEEECCCEEECCCEEEEECEEEEECCCCCHHHHHHHHC
DPDDHALLYLDHLLPQGVAIARGDDRWFDVVRWTVNLLIWAEQNGVTQANVDELRRSGPA
CCCCCEEEEEHHHCCCCEEEECCCCHHHHHHEEEEEEEEEECCCCCCCCCHHHHHCCCHH
DVRRVLGADPAFGRAIGLEPDWGYQVLKQVGNYGEIWERNLGARTRIKADRRLNRPYKDG
HHHHHHCCCCCCCCEECCCCCHHHHHHHHHCCCHHHHHHCCCCCCEECHHHHCCCCCCCC
GLLFPYPWDV
CEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]