| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is guaB [H]
Identifier: 197104881
GI number: 197104881
Start: 1603172
End: 1604632
Strand: Direct
Name: guaB [H]
Synonym: PHZ_c1415
Alternate gene names: 197104881
Gene position: 1603172-1604632 (Clockwise)
Preceding gene: 197104880
Following gene: 197104882
Centisome position: 40.12
GC content: 68.72
Gene sequence:
>1461_bases ATGGAGATTCGCGAAGGGCTCACCTTCGACGATGTTTTGCTCGAACCCGGCGCGTCCGATGTGATGCCCACGCAGGTGGA TGTCTCCACCAGGTTCACGCGAGAGATCAATCTGAACATCCCGCTCGTGTCGGCCGCCATGGACACGGTCACCGAAAGCC GGCTGGCGATCGCCATGGCCCAGGCTGGCGGCATCGGGGTGCTTCACCGCAACCTGACGGTCGACGAACAGGCCGACCAG GTCCGCGAGGTGAAGCGCTACGAGAGCGGCATGGTCATCAACCCGCTGACCATCGGCCCCGACACCACCCTGGGCGAGGT CCGCCAGATCAAGGCGCGCAAGCGGATCTCGGGCTTCCCCGTGGTGGACGAGGCCGGCAAGCTCTGCGGCATCTTGACCA ACCGGGACATGCGCTTCGAGAGTCGTGACGACATCCCGGCCAAGGCGCTGATGACCCGGGAGAACCTGGTCACCGTCAAG GAGGGCGTCAGCCAGGCCGAGGCGCGAGACTTGCTGCGCCGGCACAAGATCGAGCGCCTGATCGTCGTCGACGACGAGTA CCACGCCGTCGGCCTGATCACCGTCAAGGACATGGAGAAGGCTCAGGCCCATCCGTTCGCGGCCAAGGACGCCCAGGGCC GTCTGCTGGTGGCGGCGGCCTCGACGGTCGGCGATGCGGGCTACGAGCGCTCAATGGCCCTCGTGGACGCCGGCGTCGAC GTGGTGGTGATCGACACCGCCCACGGCCACAATGCCTCGGTGGCCGACGCCGTCCAGCGGGTGAAGCGCGAGACCAACCG CGTCCAGATCGTCGCCGGCAACGTGGCGACCTACGACGGGGCGCGCGCGCTGATCGACGCCGGCGCCGACGCCGTGAAGG TGGGGATCGGGCCCGGGTCGATCTGCACCACGCGGATCGTGGCGGGCGTAGGCGTGCCGCAGCTGACCGCCATCGCCGAT GCGGTGCGCGCGGCGCAGGGCTCGGACGTTCCGGTCGTCGCCGACGGCGGCATCAAGTACTCGGGGGATCTCGCCAAGGC GCTCGCCATGGGCGCCTCGGTGGCGATGATGGGCTCGGTGTTCGCGGGCGTCGACGAGGCGCCGGGCGAGGTGTTCCTGT ACCAGGGCCGCTCGTACAAGGCGTACCGCGGCATGGGTTCGCTGGGCGCCATGGGCCAGGGCTCGGCGGACCGCTACTTC CAGAAGGACGTGAAGGACGCGCTGAAGCTGGTGCCTGAAGGCATCGAGGGACAGGTCCCCTACAAGGGCCCGATCGCCCC CATCCTGCACCAGATGATCGGCGGCCTGCGCGCGGCCATGGGTTATGTCGGCGGCGCCGACCTGGCCGAGTTCCGCAAGC GGGCCCGGTTCATCCGCATCACCAACGCCGGCCTTCGCGAGAGCCACGTCCACGACGTGATGATCACCCGCGAGGCGCCG AACTACCCCAGCGCCGTCTAG
Upstream 100 bases:
>100_bases CGGCGCCGCAGGAGACCGTAATCGCATGAAGCAGCTCACCTCGCCCCTTGCCCCGGGGTCGGCCTTACCCCTATACCCGC GCCGCAAAACGGAGAGTCTC
Downstream 100 bases:
>100_bases GCCGCCTCATGCGCGACGGCGGACGGCTGGCGGCGGCCATTGAAGTTCTGACGGAGATCGAGGCTCGCCACCGCCCCGTC CGCCTGGCGCTGAAGGCCTG
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MEIREGLTFDDVLLEPGASDVMPTQVDVSTRFTREINLNIPLVSAAMDTVTESRLAIAMAQAGGIGVLHRNLTVDEQADQ VREVKRYESGMVINPLTIGPDTTLGEVRQIKARKRISGFPVVDEAGKLCGILTNRDMRFESRDDIPAKALMTRENLVTVK EGVSQAEARDLLRRHKIERLIVVDDEYHAVGLITVKDMEKAQAHPFAAKDAQGRLLVAAASTVGDAGYERSMALVDAGVD VVVIDTAHGHNASVADAVQRVKRETNRVQIVAGNVATYDGARALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIAD AVRAAQGSDVPVVADGGIKYSGDLAKALAMGASVAMMGSVFAGVDEAPGEVFLYQGRSYKAYRGMGSLGAMGQGSADRYF QKDVKDALKLVPEGIEGQVPYKGPIAPILHQMIGGLRAAMGYVGGADLAEFRKRARFIRITNAGLRESHVHDVMITREAP NYPSAV
Sequences:
>Translated_486_residues MEIREGLTFDDVLLEPGASDVMPTQVDVSTRFTREINLNIPLVSAAMDTVTESRLAIAMAQAGGIGVLHRNLTVDEQADQ VREVKRYESGMVINPLTIGPDTTLGEVRQIKARKRISGFPVVDEAGKLCGILTNRDMRFESRDDIPAKALMTRENLVTVK EGVSQAEARDLLRRHKIERLIVVDDEYHAVGLITVKDMEKAQAHPFAAKDAQGRLLVAAASTVGDAGYERSMALVDAGVD VVVIDTAHGHNASVADAVQRVKRETNRVQIVAGNVATYDGARALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIAD AVRAAQGSDVPVVADGGIKYSGDLAKALAMGASVAMMGSVFAGVDEAPGEVFLYQGRSYKAYRGMGSLGAMGQGSADRYF QKDVKDALKLVPEGIEGQVPYKGPIAPILHQMIGGLRAAMGYVGGADLAEFRKRARFIRITNAGLRESHVHDVMITREAP NYPSAV >Mature_486_residues MEIREGLTFDDVLLEPGASDVMPTQVDVSTRFTREINLNIPLVSAAMDTVTESRLAIAMAQAGGIGVLHRNLTVDEQADQ VREVKRYESGMVINPLTIGPDTTLGEVRQIKARKRISGFPVVDEAGKLCGILTNRDMRFESRDDIPAKALMTRENLVTVK EGVSQAEARDLLRRHKIERLIVVDDEYHAVGLITVKDMEKAQAHPFAAKDAQGRLLVAAASTVGDAGYERSMALVDAGVD VVVIDTAHGHNASVADAVQRVKRETNRVQIVAGNVATYDGARALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIAD AVRAAQGSDVPVVADGGIKYSGDLAKALAMGASVAMMGSVFAGVDEAPGEVFLYQGRSYKAYRGMGSLGAMGQGSADRYF QKDVKDALKLVPEGIEGQVPYKGPIAPILHQMIGGLRAAMGYVGGADLAEFRKRARFIRITNAGLRESHVHDVMITREAP NYPSAV
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=482, Percent_Identity=39.6265560165975, Blast_Score=327, Evalue=1e-89, Organism=Homo sapiens, GI217035146, Length=480, Percent_Identity=38.5416666666667, Blast_Score=319, Evalue=3e-87, Organism=Homo sapiens, GI34328930, Length=480, Percent_Identity=38.5416666666667, Blast_Score=319, Evalue=4e-87, Organism=Homo sapiens, GI34328928, Length=480, Percent_Identity=38.5416666666667, Blast_Score=318, Evalue=5e-87, Organism=Homo sapiens, GI156616279, Length=480, Percent_Identity=38.5416666666667, Blast_Score=318, Evalue=6e-87, Organism=Homo sapiens, GI217035152, Length=474, Percent_Identity=38.3966244725738, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI217035148, Length=480, Percent_Identity=37.7083333333333, Blast_Score=306, Evalue=3e-83, Organism=Homo sapiens, GI217035150, Length=480, Percent_Identity=35.8333333333333, Blast_Score=280, Evalue=3e-75, Organism=Homo sapiens, GI156104880, Length=260, Percent_Identity=37.3076923076923, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI50541954, Length=271, Percent_Identity=35.4243542435424, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI50541952, Length=271, Percent_Identity=35.4243542435424, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI50541948, Length=271, Percent_Identity=35.4243542435424, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI50541956, Length=271, Percent_Identity=35.4243542435424, Blast_Score=162, Evalue=8e-40, Organism=Escherichia coli, GI1788855, Length=484, Percent_Identity=56.6115702479339, Blast_Score=514, Evalue=1e-147, Organism=Escherichia coli, GI1786293, Length=248, Percent_Identity=36.2903225806452, Blast_Score=152, Evalue=6e-38, Organism=Caenorhabditis elegans, GI71994385, Length=505, Percent_Identity=35.4455445544554, Blast_Score=265, Evalue=3e-71, Organism=Caenorhabditis elegans, GI71994389, Length=431, Percent_Identity=37.8190255220418, Blast_Score=254, Evalue=5e-68, Organism=Caenorhabditis elegans, GI17560440, Length=245, Percent_Identity=37.9591836734694, Blast_Score=164, Evalue=8e-41, Organism=Saccharomyces cerevisiae, GI6322012, Length=487, Percent_Identity=39.8357289527721, Blast_Score=344, Evalue=2e-95, Organism=Saccharomyces cerevisiae, GI6323464, Length=487, Percent_Identity=40.041067761807, Blast_Score=335, Evalue=9e-93, Organism=Saccharomyces cerevisiae, GI6323585, Length=485, Percent_Identity=38.9690721649485, Blast_Score=334, Evalue=2e-92, Organism=Saccharomyces cerevisiae, GI6319352, Length=342, Percent_Identity=40.6432748538012, Blast_Score=263, Evalue=4e-71, Organism=Saccharomyces cerevisiae, GI6319353, Length=119, Percent_Identity=36.9747899159664, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI24641071, Length=484, Percent_Identity=38.0165289256198, Blast_Score=321, Evalue=9e-88, Organism=Drosophila melanogaster, GI24641073, Length=484, Percent_Identity=38.0165289256198, Blast_Score=321, Evalue=9e-88, Organism=Drosophila melanogaster, GI28571163, Length=442, Percent_Identity=37.5565610859729, Blast_Score=282, Evalue=3e-76,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51740; Mature: 51740
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIREGLTFDDVLLEPGASDVMPTQVDVSTRFTREINLNIPLVSAAMDTVTESRLAIAMA CCCCCCCCHHHHEECCCCCCCCCCEEECCEEEEEEEECCCCCHHHHHHHHHHHHHEEEEE QAGGIGVLHRNLTVDEQADQVREVKRYESGMVINPLTIGPDTTLGEVRQIKARKRISGFP CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC VVDEAGKLCGILTNRDMRFESRDDIPAKALMTRENLVTVKEGVSQAEARDLLRRHKIERL CHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCEE IVVDDEYHAVGLITVKDMEKAQAHPFAAKDAQGRLLVAAASTVGDAGYERSMALVDAGVD EEECCCCCEEEEEEECCCHHHHCCCCCCCCCCCCEEEEEECHHCCCCHHCCEEEEECCCC VVVIDTAHGHNASVADAVQRVKRETNRVQIVAGNVATYDGARALIDAGADAVKVGIGPGS EEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCEEECCCCHHHHHCCCCEEEEECCCCC ICTTRIVAGVGVPQLTAIADAVRAAQGSDVPVVADGGIKYSGDLAKALAMGASVAMMGSV HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEECCHHHHHHHHCHHHHHHHHH FAGVDEAPGEVFLYQGRSYKAYRGMGSLGAMGQGSADRYFQKDVKDALKLVPEGIEGQVP HHCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC YKGPIAPILHQMIGGLRAAMGYVGGADLAEFRKRARFIRITNAGLRESHVHDVMITREAP CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCEEEEEECCCCCCCCCCEEEEEECCC NYPSAV CCCCCC >Mature Secondary Structure MEIREGLTFDDVLLEPGASDVMPTQVDVSTRFTREINLNIPLVSAAMDTVTESRLAIAMA CCCCCCCCHHHHEECCCCCCCCCCEEECCEEEEEEEECCCCCHHHHHHHHHHHHHEEEEE QAGGIGVLHRNLTVDEQADQVREVKRYESGMVINPLTIGPDTTLGEVRQIKARKRISGFP CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC VVDEAGKLCGILTNRDMRFESRDDIPAKALMTRENLVTVKEGVSQAEARDLLRRHKIERL CHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCEE IVVDDEYHAVGLITVKDMEKAQAHPFAAKDAQGRLLVAAASTVGDAGYERSMALVDAGVD EEECCCCCEEEEEEECCCHHHHCCCCCCCCCCCCEEEEEECHHCCCCHHCCEEEEECCCC VVVIDTAHGHNASVADAVQRVKRETNRVQIVAGNVATYDGARALIDAGADAVKVGIGPGS EEEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCEEECCCCHHHHHCCCCEEEEECCCCC ICTTRIVAGVGVPQLTAIADAVRAAQGSDVPVVADGGIKYSGDLAKALAMGASVAMMGSV HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEECCHHHHHHHHCHHHHHHHHH FAGVDEAPGEVFLYQGRSYKAYRGMGSLGAMGQGSADRYFQKDVKDALKLVPEGIEGQVP HHCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC YKGPIAPILHQMIGGLRAAMGYVGGADLAEFRKRARFIRITNAGLRESHVHDVMITREAP CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCEEEEEECCCCCCCCCCEEEEEECCC NYPSAV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA