| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is yhbW [H]
Identifier: 197104815
GI number: 197104815
Start: 1530552
End: 1531586
Strand: Direct
Name: yhbW [H]
Synonym: PHZ_c1349
Alternate gene names: 197104815
Gene position: 1530552-1531586 (Clockwise)
Preceding gene: 197104814
Following gene: 197104817
Centisome position: 38.3
GC content: 73.14
Gene sequence:
>1035_bases GTGAGCGGGGCCCATATTGGCGGCATGGTTCCCCTTTCCGTCCTCGACCTCTCGCCGATCCTGGAAGGCTCGGACGCCGC CCAGTCGTTCCGCAACAGCCTGGACCTGGCCCGCCACGCCGAGCGCCTGGGCTATCGCCGCTTCTGGCTCGCCGAGCACC ACAACATGCCGGGCGTCGCCTCGGCCGCGACCGCGGTGGTCATCGGCCACGTGGCCGCCGGCACCAGCACCATCCGGGTA GGGGCGGGCGGCATCATGCTGCCCAACCATGCGCCGCTGGTGATCGCCGAACAGTTCGGCACCCTGGCCAGCCTGTTCCC CGGCCGCATCGACCTGGGCGTCGGCCGCGCGCCGGGCACCGACCAGATGACCGCCCGGGCCCTGCGGCGCACCCTCGTGG GCGACGTCGACCGCTTCCCGCAGGACGTGGTCGAGCTGATGGCCTACTTCCAGCCGGCCCAGCCGAACCAGGCGGTCCGC GCCGTGCCGGGCGCGGGCCTCGACGTGCCGGTGTGGATGCTGGGGTCCAGCACCTTCGGCGCGGAACTGGCCGCGATCCT GGGGCTGCCCTACGCCTTCGCCTCGCATTTCGCCCCGGCCATGATGGAGCAGGCGATCGCCGTCTACCGGGCGAACTTCC GCCCCTCCGAGCGGCTGGAGAAGCCCTACCTGATGCTCGGCCTGAACGTCGTGGCCGCCGAGACCGACGCCGAGGCGCGG CGGCTGTTCACTTCGCTGCAGCAGGCTTTCCTGAACCTGCGGACGGGGCGGCCCACGCCCCTGCCGCCGCCCGTGGACGA CATGGACCAGCGGCTGGCCGCCTCGGGCATCTCGCCGGCAGAGCAGGGCGCGCTCGCCAAGGCCGTGGTCGGCGGGCCCG AGACCGTGCGGAACGGCCTGCGCGACTTCGTGGCCGCCCACCGGCCCGACGAGATCATCGTCACGGCCCAGATCTACGAT CACGCCGCCCGCGTCCGCTCGTTCGAGATCGCGGCCGAGGCGGCGAGGGCGCTCGCGACGCAGCCGGCGCTCTAG
Upstream 100 bases:
>100_bases CGCGGACCCTGATCGACGCCGGCTTCAGGCTGGAGCGGGTCCTGCCGGTGGACCAGTTCCTCTGGTCCCCGCACATAGAA CTTGTGGGGGTGTTCCAGCG
Downstream 100 bases:
>100_bases GCCCGCGCTGTCACCAGCCAGCAGGCGGCCGTGAAGCGGGCCTCTCCATCCTCGATGAAGGGCGCATAGGCCGTCTGCAA CGCTTCGACGATCCGCGCAC
Product: luciferase-like monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSGAHIGGMVPLSVLDLSPILEGSDAAQSFRNSLDLARHAERLGYRRFWLAEHHNMPGVASAATAVVIGHVAAGTSTIRV GAGGIMLPNHAPLVIAEQFGTLASLFPGRIDLGVGRAPGTDQMTARALRRTLVGDVDRFPQDVVELMAYFQPAQPNQAVR AVPGAGLDVPVWMLGSSTFGAELAAILGLPYAFASHFAPAMMEQAIAVYRANFRPSERLEKPYLMLGLNVVAAETDAEAR RLFTSLQQAFLNLRTGRPTPLPPPVDDMDQRLAASGISPAEQGALAKAVVGGPETVRNGLRDFVAAHRPDEIIVTAQIYD HAARVRSFEIAAEAARALATQPAL
Sequences:
>Translated_344_residues MSGAHIGGMVPLSVLDLSPILEGSDAAQSFRNSLDLARHAERLGYRRFWLAEHHNMPGVASAATAVVIGHVAAGTSTIRV GAGGIMLPNHAPLVIAEQFGTLASLFPGRIDLGVGRAPGTDQMTARALRRTLVGDVDRFPQDVVELMAYFQPAQPNQAVR AVPGAGLDVPVWMLGSSTFGAELAAILGLPYAFASHFAPAMMEQAIAVYRANFRPSERLEKPYLMLGLNVVAAETDAEAR RLFTSLQQAFLNLRTGRPTPLPPPVDDMDQRLAASGISPAEQGALAKAVVGGPETVRNGLRDFVAAHRPDEIIVTAQIYD HAARVRSFEIAAEAARALATQPAL >Mature_343_residues SGAHIGGMVPLSVLDLSPILEGSDAAQSFRNSLDLARHAERLGYRRFWLAEHHNMPGVASAATAVVIGHVAAGTSTIRVG AGGIMLPNHAPLVIAEQFGTLASLFPGRIDLGVGRAPGTDQMTARALRRTLVGDVDRFPQDVVELMAYFQPAQPNQAVRA VPGAGLDVPVWMLGSSTFGAELAAILGLPYAFASHFAPAMMEQAIAVYRANFRPSERLEKPYLMLGLNVVAAETDAEARR LFTSLQQAFLNLRTGRPTPLPPPVDDMDQRLAASGISPAEQGALAKAVVGGPETVRNGLRDFVAAHRPDEIIVTAQIYDH AARVRSFEIAAEAARALATQPAL
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=333, Percent_Identity=56.4564564564565, Blast_Score=388, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 36547; Mature: 36416
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAHIGGMVPLSVLDLSPILEGSDAAQSFRNSLDLARHAERLGYRRFWLAEHHNMPGVA CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHH SAATAVVIGHVAAGTSTIRVGAGGIMLPNHAPLVIAEQFGTLASLFPGRIDLGVGRAPGT HHHHHHHHHHHHCCCCEEEECCCCEECCCCCCEEEHHHHHHHHHHCCCCEEECCCCCCCC DQMTARALRRTLVGDVDRFPQDVVELMAYFQPAQPNQAVRAVPGAGLDVPVWMLGSSTFG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEECCCCHH AELAAILGLPYAFASHFAPAMMEQAIAVYRANFRPSERLEKPYLMLGLNVVAAETDAEAR HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEECCEEEEECCCHHHH RLFTSLQQAFLNLRTGRPTPLPPPVDDMDQRLAASGISPAEQGALAKAVVGGPETVRNGL HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCHHHHHCCCHHHHHHHH RDFVAAHRPDEIIVTAQIYDHAARVRSFEIAAEAARALATQPAL HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SGAHIGGMVPLSVLDLSPILEGSDAAQSFRNSLDLARHAERLGYRRFWLAEHHNMPGVA CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHH SAATAVVIGHVAAGTSTIRVGAGGIMLPNHAPLVIAEQFGTLASLFPGRIDLGVGRAPGT HHHHHHHHHHHHCCCCEEEECCCCEECCCCCCEEEHHHHHHHHHHCCCCEEECCCCCCCC DQMTARALRRTLVGDVDRFPQDVVELMAYFQPAQPNQAVRAVPGAGLDVPVWMLGSSTFG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEECCCCHH AELAAILGLPYAFASHFAPAMMEQAIAVYRANFRPSERLEKPYLMLGLNVVAAETDAEAR HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEECCEEEEECCCHHHH RLFTSLQQAFLNLRTGRPTPLPPPVDDMDQRLAASGISPAEQGALAKAVVGGPETVRNGL HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCHHHHHCCCHHHHHHHH RDFVAAHRPDEIIVTAQIYDHAARVRSFEIAAEAARALATQPAL HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]