| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104780
Identifier: 197104780
GI number: 197104780
Start: 1490678
End: 1491391
Strand: Reverse
Name: 197104780
Synonym: PHZ_c1314
Alternate gene names: NA
Gene position: 1491391-1490678 (Counterclockwise)
Preceding gene: 197104781
Following gene: 197104779
Centisome position: 37.32
GC content: 74.65
Gene sequence:
>714_bases ATGTCCGACGCCCCGCTCCTGCCCCTGAAGCCCGAAGGTCCGGCCCGTACGCCCGGCCAGCGGGCCGTGCGCCCGAAGAG CGCGGCCACGGTGATGATCATCCGGCGCGACGCGGCCCGGCCGCGGGTGCTGATGGGCCGGCGGCACGGCGGCCATAGCT TCATGCCCGACCGCTGGGTGTTCCCGGGCGGGCGGATCGACCGCGCCGATTACCGCGCCCCGTTCGCCACCGACCTGAAG CCCGACACCGCCGCCCTGTTCGACGCCTACTTGAAGCCCGGCAAGGGCCGCGCCCTGGCCCTGGCGGCGATCCGCGAGAC CTGGGAGGAGGCCGGCCTGCTGCTGGCCCGGCGCGCGCCGCTGCGCCCCGCCGCCGGCCCCTGGCGGCCGTTCGTCGAGC AGGGGGCCCTGCCCGACCTGGAGGCGCTGGAGGTCATCGCCCGGGCGGTCACGCCGCCCAGCGTGGGCAAGCGCTTCGAC ACCTGGTTCCTGATGGCCGACGCCGAGCGCCTGGCCAGCCTCGACCGCCAGCCCGACTGCGGCGAGCTGGAGGAGATCGC CTGGGTCGAGTTCGAGGAGGCGATGGACCTGCCCCTGCCCACGGTCACCCGACTGATGATCAAGGAGGCCCAGGCGCGGA TGGAGGACCCGTCGCGCCCGAAGCCGTTCCTGAGGTACAAGGACCGGTCCGCCGGACGTCCCGCCTACCTCTAG
Upstream 100 bases:
>100_bases CGCGGGCCGCGCGCCGAAGGCCAAGGGTCGGACGACACGCCGCGGGCGTTGACGCGGCGACAGCCTTCCGCGCCCGCGCC GGGCCTCATACATTTGTTCG
Downstream 100 bases:
>100_bases CCGCGAGGCTCGCATGGCTTCCGAAGGCCCCATCGAAGGAATTCCCGCCCTCGCCCCCGGCGGTGCGGCCGTCGTGACCG GCGCGGCCAGCGGCATCGGC
Product: NTP pyrophosphohydrolase including oxidative damage repair enzymes
Products: NA
Alternate protein names: Hydrolase Nudix Family; Nudix Hydrolase; Hydrolase NUDIX Family; NUDIX Family Hydrolase; Hydrolase; Phosphohydrolase; MutT/Nudix Family Phosphohydrolase; NUDIX Superfamily Hydrolase
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSDAPLLPLKPEGPARTPGQRAVRPKSAATVMIIRRDAARPRVLMGRRHGGHSFMPDRWVFPGGRIDRADYRAPFATDLK PDTAALFDAYLKPGKGRALALAAIRETWEEAGLLLARRAPLRPAAGPWRPFVEQGALPDLEALEVIARAVTPPSVGKRFD TWFLMADAERLASLDRQPDCGELEEIAWVEFEEAMDLPLPTVTRLMIKEAQARMEDPSRPKPFLRYKDRSAGRPAYL
Sequences:
>Translated_237_residues MSDAPLLPLKPEGPARTPGQRAVRPKSAATVMIIRRDAARPRVLMGRRHGGHSFMPDRWVFPGGRIDRADYRAPFATDLK PDTAALFDAYLKPGKGRALALAAIRETWEEAGLLLARRAPLRPAAGPWRPFVEQGALPDLEALEVIARAVTPPSVGKRFD TWFLMADAERLASLDRQPDCGELEEIAWVEFEEAMDLPLPTVTRLMIKEAQARMEDPSRPKPFLRYKDRSAGRPAYL >Mature_236_residues SDAPLLPLKPEGPARTPGQRAVRPKSAATVMIIRRDAARPRVLMGRRHGGHSFMPDRWVFPGGRIDRADYRAPFATDLKP DTAALFDAYLKPGKGRALALAAIRETWEEAGLLLARRAPLRPAAGPWRPFVEQGALPDLEALEVIARAVTPPSVGKRFDT WFLMADAERLASLDRQPDCGELEEIAWVEFEEAMDLPLPTVTRLMIKEAQARMEDPSRPKPFLRYKDRSAGRPAYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26457; Mature: 26326
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAPLLPLKPEGPARTPGQRAVRPKSAATVMIIRRDAARPRVLMGRRHGGHSFMPDRWV CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCEE FPGGRIDRADYRAPFATDLKPDTAALFDAYLKPGKGRALALAAIRETWEEAGLLLARRAP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCEEEECCCC LRPAAGPWRPFVEQGALPDLEALEVIARAVTPPSVGKRFDTWFLMADAERLASLDRQPDC CCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHCCCCCEEEEEECHHHHHHCCCCCCC GELEEIAWVEFEEAMDLPLPTVTRLMIKEAQARMEDPSRPKPFLRYKDRSAGRPAYL CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure SDAPLLPLKPEGPARTPGQRAVRPKSAATVMIIRRDAARPRVLMGRRHGGHSFMPDRWV CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCEE FPGGRIDRADYRAPFATDLKPDTAALFDAYLKPGKGRALALAAIRETWEEAGLLLARRAP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCEEEECCCC LRPAAGPWRPFVEQGALPDLEALEVIARAVTPPSVGKRFDTWFLMADAERLASLDRQPDC CCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHCCCCCEEEEEECHHHHHHCCCCCCC GELEEIAWVEFEEAMDLPLPTVTRLMIKEAQARMEDPSRPKPFLRYKDRSAGRPAYL CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA