| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104689
Identifier: 197104689
GI number: 197104689
Start: 1412694
End: 1413404
Strand: Reverse
Name: 197104689
Synonym: PHZ_c1223
Alternate gene names: NA
Gene position: 1413404-1412694 (Counterclockwise)
Preceding gene: 197104735
Following gene: 197104675
Centisome position: 35.37
GC content: 77.5
Gene sequence:
>711_bases TTGAGCACGACCTGGAGCGCCATGCGGCCGGCTGGACGGGGCCGAACCTTAGTCATCGTGGCGATCTCCGTCGTCGCGCA CGCCGCGGTCCTCGCGGCGCTGGCCCTGCATGTGCCCAAGCTCTTCGTCCCCCCGGTCCGCTCGGGCCCGCCGCAGCCGA TCATCCCGGTGCTGCTGACCCCCCGCACGCCGCCCCCCGAGGCCGGCGGCCCGCCGCGCCCGATCCGTCTGCACCGGCGC CAGCCGCGCGTGCCGCTCGACCGTCTCCCGGTGGCCCCGCTGGTCGCCCCCGAGGCCGAGCCCGAGCCCGACGCCGAGCG CGACCGCCGCGCGCCGCGCGTCGTGACGGTCGATCCGGTGGCGCAGAACGCGCGCCAGACGCTGCGGGGGCTGATCGGGT GCGCGAACCCCTCCCTGCTCAGCCGTGAGGAACGCGAGAAGTGCCAGGAGCAGCTGGCCCGCGGCGCCCGCGAGGCCGAG TTCCCGGGCCTGGGTCTGGACGCCGACGACGCCTCGGACCTGGGGCGCGCCGCCGCCCGCCGCGAGGCCGGCTACCGCTA CAAGCGCAGCGAGGAATCCCGCCCGCGCGAACCCGGCTCGCAGGTCGACTGGGACGTCCGCCGCAGCCCGCCCGCCGGGG CCTCGCACATGAAGGGCATGGGCGGCTCGGCCCACGACGCCAGCGGCGCCGCGGGCCGGTCCAGGAACTGA
Upstream 100 bases:
>100_bases CGCGCTACATAGTCGTAAGAGGGGCTCGCGTCAACGCGACTCCGCCGGCGGGACGTGCCATGAATTCGCCGCGGCGAACG CCCTAACCTTACGGCGAAGC
Downstream 100 bases:
>100_bases CTACGCCCCGGGACTGATCAGGCCGCCACGCGGTCCTTCATCTCCAGCGGCGCCTCCAGCACGGCCCAGTCGATCAGGCC GTCGTGCTGCAGGTTCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSTTWSAMRPAGRGRTLVIVAISVVAHAAVLAALALHVPKLFVPPVRSGPPQPIIPVLLTPRTPPPEAGGPPRPIRLHRR QPRVPLDRLPVAPLVAPEAEPEPDAERDRRAPRVVTVDPVAQNARQTLRGLIGCANPSLLSREEREKCQEQLARGAREAE FPGLGLDADDASDLGRAAARREAGYRYKRSEESRPREPGSQVDWDVRRSPPAGASHMKGMGGSAHDASGAAGRSRN
Sequences:
>Translated_236_residues MSTTWSAMRPAGRGRTLVIVAISVVAHAAVLAALALHVPKLFVPPVRSGPPQPIIPVLLTPRTPPPEAGGPPRPIRLHRR QPRVPLDRLPVAPLVAPEAEPEPDAERDRRAPRVVTVDPVAQNARQTLRGLIGCANPSLLSREEREKCQEQLARGAREAE FPGLGLDADDASDLGRAAARREAGYRYKRSEESRPREPGSQVDWDVRRSPPAGASHMKGMGGSAHDASGAAGRSRN >Mature_235_residues STTWSAMRPAGRGRTLVIVAISVVAHAAVLAALALHVPKLFVPPVRSGPPQPIIPVLLTPRTPPPEAGGPPRPIRLHRRQ PRVPLDRLPVAPLVAPEAEPEPDAERDRRAPRVVTVDPVAQNARQTLRGLIGCANPSLLSREEREKCQEQLARGAREAEF PGLGLDADDASDLGRAAARREAGYRYKRSEESRPREPGSQVDWDVRRSPPAGASHMKGMGGSAHDASGAAGRSRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25351; Mature: 25220
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTWSAMRPAGRGRTLVIVAISVVAHAAVLAALALHVPKLFVPPVRSGPPQPIIPVLLT CCCCCCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC PRTPPPEAGGPPRPIRLHRRQPRVPLDRLPVAPLVAPEAEPEPDAERDRRAPRVVTVDPV CCCCCCCCCCCCCCEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEECHH AQNARQTLRGLIGCANPSLLSREEREKCQEQLARGAREAEFPGLGLDADDASDLGRAAAR HHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH REAGYRYKRSEESRPREPGSQVDWDVRRSPPAGASHMKGMGGSAHDASGAAGRSRN HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STTWSAMRPAGRGRTLVIVAISVVAHAAVLAALALHVPKLFVPPVRSGPPQPIIPVLLT CCCCCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC PRTPPPEAGGPPRPIRLHRRQPRVPLDRLPVAPLVAPEAEPEPDAERDRRAPRVVTVDPV CCCCCCCCCCCCCCEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEECHH AQNARQTLRGLIGCANPSLLSREEREKCQEQLARGAREAEFPGLGLDADDASDLGRAAAR HHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH REAGYRYKRSEESRPREPGSQVDWDVRRSPPAGASHMKGMGGSAHDASGAAGRSRN HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA