| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is rfbP [C]
Identifier: 197104617
GI number: 197104617
Start: 1320874
End: 1321722
Strand: Direct
Name: rfbP [C]
Synonym: PHZ_c1151
Alternate gene names: 197104617
Gene position: 1320874-1321722 (Clockwise)
Preceding gene: 197104611
Following gene: 197104618
Centisome position: 33.05
GC content: 69.85
Gene sequence:
>849_bases GTGGTCAGGAACGGGGCCAGGGACGAGGCCAGGGACGGGGCCAGGGACGGGGCCAGTACAACAGTCGGTGAGCGCCGACC GGTTCTTCGAATTGCTCCGGAACTTAGCCGCACGGCCGCGGGTTGTTCGGCTCGTTTACCGGGCCCTAGCCCGACCATCC CTTTCGCCAGAGTGCTCATGTCCGAAATCGTCTTCGCGAACCCGACGACCGTCCGCTCGCACGCGCCGGGGCTGTCCCTG GACGGGGCGGCCACCACCACGATGAACGTGACGATCGCGCTCGCGGCGATCCTCTTCCTCGCCCCGCTGATGATCGTGGT CGCCCTGCTGATCTACGCCCAGGACGGCGGGCCGGTGGTCTTCGCGCACAAGCGGCTGGGCCGCGGCGGCAAGCACTTCA AGTGCCTGAAGTTCCGCTCGATGGCCGTGGACGCCGAGGCGCGGCTGGCCGAGCTGCTGGCCCGGGACCCGGCCGCCCGC GCCGAGTGGGAGAAGGATCACAAGCTGCGGCAGGACCCGCGGGTGACGAAGCTGGGCGCCTTCCTGCGCAAGTCGAGCCT GGACGAGCTGCCCCAGCTCTTCAACGTGCTGCGCGGCGAGATGAGCCTCGTGGGGCCCCGCCCGATCGTCGACGCCGAGG CCGCCAAGTACGGCCGCCGCTTCCGCCACTACTGCGCGGTGAAGCCGGGGATCACGGGCCTGTGGCAGGTCAGCGGCCGC AACGACACCAGCTACCGCGCCCGCGTGGCCATGGACTGCGTCTACGCCGCGCGCCGCAACGCCATGCTGGACCTCAAGAT CATGTTCGCCACCGTGCCGGCGGTGCTGCTCAGCCGCGGTTCGTATTAG
Upstream 100 bases:
>100_bases GACCGTCGAGGCCTGAGCGAGGCCTGAGCGGCCGGAGCCTTCAACCCATCTGCGGCGGACGATCCGCGCGACCGCGCGCG CGGTCGCGTCGGCCTGCGCC
Downstream 100 bases:
>100_bases AAGGGGCGTATGCCGATCCGACACACGAGGGCGGCGGCGGCCGTCCTCTGGGGATTCCTGCGGCGCTTCGAGACGCGCGC CCTGCTGCTCTTCATCGGGG
Product: undecaprenyl-phosphate galactosephosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MVRNGARDEARDGARDGASTTVGERRPVLRIAPELSRTAAGCSARLPGPSPTIPFARVLMSEIVFANPTTVRSHAPGLSL DGAATTTMNVTIALAAILFLAPLMIVVALLIYAQDGGPVVFAHKRLGRGGKHFKCLKFRSMAVDAEARLAELLARDPAAR AEWEKDHKLRQDPRVTKLGAFLRKSSLDELPQLFNVLRGEMSLVGPRPIVDAEAAKYGRRFRHYCAVKPGITGLWQVSGR NDTSYRARVAMDCVYAARRNAMLDLKIMFATVPAVLLSRGSY
Sequences:
>Translated_282_residues MVRNGARDEARDGARDGASTTVGERRPVLRIAPELSRTAAGCSARLPGPSPTIPFARVLMSEIVFANPTTVRSHAPGLSL DGAATTTMNVTIALAAILFLAPLMIVVALLIYAQDGGPVVFAHKRLGRGGKHFKCLKFRSMAVDAEARLAELLARDPAAR AEWEKDHKLRQDPRVTKLGAFLRKSSLDELPQLFNVLRGEMSLVGPRPIVDAEAAKYGRRFRHYCAVKPGITGLWQVSGR NDTSYRARVAMDCVYAARRNAMLDLKIMFATVPAVLLSRGSY >Mature_282_residues MVRNGARDEARDGARDGASTTVGERRPVLRIAPELSRTAAGCSARLPGPSPTIPFARVLMSEIVFANPTTVRSHAPGLSL DGAATTTMNVTIALAAILFLAPLMIVVALLIYAQDGGPVVFAHKRLGRGGKHFKCLKFRSMAVDAEARLAELLARDPAAR AEWEKDHKLRQDPRVTKLGAFLRKSSLDELPQLFNVLRGEMSLVGPRPIVDAEAAKYGRRFRHYCAVKPGITGLWQVSGR NDTSYRARVAMDCVYAARRNAMLDLKIMFATVPAVLLSRGSY
Specific function: May function as a sugar transferase [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=204, Percent_Identity=36.7647058823529, Blast_Score=121, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017472 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 30722; Mature: 30722
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRNGARDEARDGARDGASTTVGERRPVLRIAPELSRTAAGCSARLPGPSPTIPFARVLM CCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCHHHHHHH SEIVFANPTTVRSHAPGLSLDGAATTTMNVTIALAAILFLAPLMIVVALLIYAQDGGPVV HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE FAHKRLGRGGKHFKCLKFRSMAVDAEARLAELLARDPAARAEWEKDHKLRQDPRVTKLGA EEEHHHCCCCCCEEEEEHHHHHCCHHHHHHHHHHCCCCHHCCCHHHHHHHCCCCHHHHHH FLRKSSLDELPQLFNVLRGEMSLVGPRPIVDAEAAKYGRRFRHYCAVKPGITGLWQVSGR HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCC NDTSYRARVAMDCVYAARRNAMLDLKIMFATVPAVLLSRGSY CCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVRNGARDEARDGARDGASTTVGERRPVLRIAPELSRTAAGCSARLPGPSPTIPFARVLM CCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCHHHHHHH SEIVFANPTTVRSHAPGLSLDGAATTTMNVTIALAAILFLAPLMIVVALLIYAQDGGPVV HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE FAHKRLGRGGKHFKCLKFRSMAVDAEARLAELLARDPAARAEWEKDHKLRQDPRVTKLGA EEEHHHCCCCCCEEEEEHHHHHCCHHHHHHHHHHCCCCHHCCCHHHHHHHCCCCHHHHHH FLRKSSLDELPQLFNVLRGEMSLVGPRPIVDAEAAKYGRRFRHYCAVKPGITGLWQVSGR HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCC NDTSYRARVAMDCVYAARRNAMLDLKIMFATVPAVLLSRGSY CCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]