Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is exoO [H]

Identifier: 197104611

GI number: 197104611

Start: 1311379

End: 1312335

Strand: Direct

Name: exoO [H]

Synonym: PHZ_c1145

Alternate gene names: 197104611

Gene position: 1311379-1312335 (Clockwise)

Preceding gene: 197104610

Following gene: 197104617

Centisome position: 32.82

GC content: 73.04

Gene sequence:

>957_bases
ATGACCGGCCAGGCGCCCCTCGTCTCGGTCGTCACCGCCAACTACAACGGCGCGCGCCACCTCGCGCCCGCGATCCGCTC
GGTCCTCGGCCAGACGCTCGGCGAGCTGGAGCTGATCGTCGCCGACGACGCCTCCACCGACGACAGCCTGCAGGTGATCG
CGGAGGCCGCGGCAGGCGATGCGCGGGTGCGCGTGCTGACTGCGCAGCGAAACGGCGGCCCCGGCGCTGCGCGCAACCGC
GCGCTCGCCGCCGTGCGCGGCCGCTATGTCGCCGTGTTCGATTCCGACGACCTGATGGCCCCCGACCGGCTGGAGAAGCT
GGTGGCGCGCGCCCGCGGCGACCATGCCAACATCGTCGTCGACAACCTGCACGTCTTCCAGGACGGCGGCGAAGCGCCGT
GGAAGCCGTTCCTCTGCCAGAAGGCCTGGGCGCACCCGCGCTGGATCACCCTGGCCGACTACATCGAGGCCGGGCGCATG
TACTCCAGGCAGCCGGGCCTGGGCTACCTCAAGCCGCTGTTCTGCGCCGAGGCCCTGCGGGGCGAGCGCTACCGCGAGGA
CCTGCGCATCGGCGAGGACTACGACCTGGTGCTGCGGCTGCTGGCCAAGGGAGCCACGATGCGCTTCGTGCCCGAGGCGC
TCTACCGCTACCGCAAGCACGGCGCCTCGATCAGCCACGTGCTGCGGCGCGAGCACATCGAGCAGATGCTGGCGGCGGAC
GCGGCGCTGGAGGCGGCGCTGCGCGAGCAGTGCGAGGCGGTTCGCCGGGCCCAGGCCAGACGCCGGCGCTCGCTGGAGAC
CGCGCTCGCCTACGACCGCGTCATCTGCGCCCTGAAGGCCAGGGACGTCCCGCAGGCGCTGGGAACCTGTGCGCAGGAGC
CCGCCGTCTGGCCGTTGCTGGCCATGCCGGTGAAGGCGCGGCTGAAGCGCCTGGCCAGCCGGCTGCAGCCGGCCTGA

Upstream 100 bases:

>100_bases
CGTGGTCGGCCGGCTTCTGGCGGCAGCTGTTCGGGGATCGGCCCGATCCCGCACCCCTCGAGCGGCACGAGCCGCTGCTG
GTGCGGCGGCCCGCGGCGCC

Downstream 100 bases:

>100_bases
TCCCCAAGCTAGACGGCTTCCGGAACCGCTGACGGCGCGGCGCCCTTGGCGTGCGCGCGGGCGAAGCGCCTGGCGTCGTC
GATCAGCCGCCCGCGGGCGA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MTGQAPLVSVVTANYNGARHLAPAIRSVLGQTLGELELIVADDASTDDSLQVIAEAAAGDARVRVLTAQRNGGPGAARNR
ALAAVRGRYVAVFDSDDLMAPDRLEKLVARARGDHANIVVDNLHVFQDGGEAPWKPFLCQKAWAHPRWITLADYIEAGRM
YSRQPGLGYLKPLFCAEALRGERYREDLRIGEDYDLVLRLLAKGATMRFVPEALYRYRKHGASISHVLRREHIEQMLAAD
AALEAALREQCEAVRRAQARRRRSLETALAYDRVICALKARDVPQALGTCAQEPAVWPLLAMPVKARLKRLASRLQPA

Sequences:

>Translated_318_residues
MTGQAPLVSVVTANYNGARHLAPAIRSVLGQTLGELELIVADDASTDDSLQVIAEAAAGDARVRVLTAQRNGGPGAARNR
ALAAVRGRYVAVFDSDDLMAPDRLEKLVARARGDHANIVVDNLHVFQDGGEAPWKPFLCQKAWAHPRWITLADYIEAGRM
YSRQPGLGYLKPLFCAEALRGERYREDLRIGEDYDLVLRLLAKGATMRFVPEALYRYRKHGASISHVLRREHIEQMLAAD
AALEAALREQCEAVRRAQARRRRSLETALAYDRVICALKARDVPQALGTCAQEPAVWPLLAMPVKARLKRLASRLQPA
>Mature_317_residues
TGQAPLVSVVTANYNGARHLAPAIRSVLGQTLGELELIVADDASTDDSLQVIAEAAAGDARVRVLTAQRNGGPGAARNRA
LAAVRGRYVAVFDSDDLMAPDRLEKLVARARGDHANIVVDNLHVFQDGGEAPWKPFLCQKAWAHPRWITLADYIEAGRMY
SRQPGLGYLKPLFCAEALRGERYREDLRIGEDYDLVLRLLAKGATMRFVPEALYRYRKHGASISHVLRREHIEQMLAADA
ALEAALREQCEAVRRAQARRRRSLETALAYDRVICALKARDVPQALGTCAQEPAVWPLLAMPVKARLKRLASRLQPA

Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fifth sugar (glucose), catalyzes the formation of a beta-1,6 linkage between the fourth and fifth sugar [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=240, Percent_Identity=24.5833333333333, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1788372, Length=227, Percent_Identity=25.9911894273128, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35116; Mature: 34985

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQAPLVSVVTANYNGARHLAPAIRSVLGQTLGELELIVADDASTDDSLQVIAEAAAGD
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCC
ARVRVLTAQRNGGPGAARNRALAAVRGRYVAVFDSDDLMAPDRLEKLVARARGDHANIVV
CEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
DNLHVFQDGGEAPWKPFLCQKAWAHPRWITLADYIEAGRMYSRQPGLGYLKPLFCAEALR
ECEEEEECCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GERYREDLRIGEDYDLVLRLLAKGATMRFVPEALYRYRKHGASISHVLRREHIEQMLAAD
HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AALEAALREQCEAVRRAQARRRRSLETALAYDRVICALKARDVPQALGTCAQEPAVWPLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHH
AMPVKARLKRLASRLQPA
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGQAPLVSVVTANYNGARHLAPAIRSVLGQTLGELELIVADDASTDDSLQVIAEAAAGD
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCC
ARVRVLTAQRNGGPGAARNRALAAVRGRYVAVFDSDDLMAPDRLEKLVARARGDHANIVV
CEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
DNLHVFQDGGEAPWKPFLCQKAWAHPRWITLADYIEAGRMYSRQPGLGYLKPLFCAEALR
ECEEEEECCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GERYREDLRIGEDYDLVLRLLAKGATMRFVPEALYRYRKHGASISHVLRREHIEQMLAAD
HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AALEAALREQCEAVRRAQARRRRSLETALAYDRVICALKARDVPQALGTCAQEPAVWPLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHH
AMPVKARLKRLASRLQPA
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226645; 8246891; 11481431 [H]