| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is exoO [H]
Identifier: 197104611
GI number: 197104611
Start: 1311379
End: 1312335
Strand: Direct
Name: exoO [H]
Synonym: PHZ_c1145
Alternate gene names: 197104611
Gene position: 1311379-1312335 (Clockwise)
Preceding gene: 197104610
Following gene: 197104617
Centisome position: 32.82
GC content: 73.04
Gene sequence:
>957_bases ATGACCGGCCAGGCGCCCCTCGTCTCGGTCGTCACCGCCAACTACAACGGCGCGCGCCACCTCGCGCCCGCGATCCGCTC GGTCCTCGGCCAGACGCTCGGCGAGCTGGAGCTGATCGTCGCCGACGACGCCTCCACCGACGACAGCCTGCAGGTGATCG CGGAGGCCGCGGCAGGCGATGCGCGGGTGCGCGTGCTGACTGCGCAGCGAAACGGCGGCCCCGGCGCTGCGCGCAACCGC GCGCTCGCCGCCGTGCGCGGCCGCTATGTCGCCGTGTTCGATTCCGACGACCTGATGGCCCCCGACCGGCTGGAGAAGCT GGTGGCGCGCGCCCGCGGCGACCATGCCAACATCGTCGTCGACAACCTGCACGTCTTCCAGGACGGCGGCGAAGCGCCGT GGAAGCCGTTCCTCTGCCAGAAGGCCTGGGCGCACCCGCGCTGGATCACCCTGGCCGACTACATCGAGGCCGGGCGCATG TACTCCAGGCAGCCGGGCCTGGGCTACCTCAAGCCGCTGTTCTGCGCCGAGGCCCTGCGGGGCGAGCGCTACCGCGAGGA CCTGCGCATCGGCGAGGACTACGACCTGGTGCTGCGGCTGCTGGCCAAGGGAGCCACGATGCGCTTCGTGCCCGAGGCGC TCTACCGCTACCGCAAGCACGGCGCCTCGATCAGCCACGTGCTGCGGCGCGAGCACATCGAGCAGATGCTGGCGGCGGAC GCGGCGCTGGAGGCGGCGCTGCGCGAGCAGTGCGAGGCGGTTCGCCGGGCCCAGGCCAGACGCCGGCGCTCGCTGGAGAC CGCGCTCGCCTACGACCGCGTCATCTGCGCCCTGAAGGCCAGGGACGTCCCGCAGGCGCTGGGAACCTGTGCGCAGGAGC CCGCCGTCTGGCCGTTGCTGGCCATGCCGGTGAAGGCGCGGCTGAAGCGCCTGGCCAGCCGGCTGCAGCCGGCCTGA
Upstream 100 bases:
>100_bases CGTGGTCGGCCGGCTTCTGGCGGCAGCTGTTCGGGGATCGGCCCGATCCCGCACCCCTCGAGCGGCACGAGCCGCTGCTG GTGCGGCGGCCCGCGGCGCC
Downstream 100 bases:
>100_bases TCCCCAAGCTAGACGGCTTCCGGAACCGCTGACGGCGCGGCGCCCTTGGCGTGCGCGCGGGCGAAGCGCCTGGCGTCGTC GATCAGCCGCCCGCGGGCGA
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTGQAPLVSVVTANYNGARHLAPAIRSVLGQTLGELELIVADDASTDDSLQVIAEAAAGDARVRVLTAQRNGGPGAARNR ALAAVRGRYVAVFDSDDLMAPDRLEKLVARARGDHANIVVDNLHVFQDGGEAPWKPFLCQKAWAHPRWITLADYIEAGRM YSRQPGLGYLKPLFCAEALRGERYREDLRIGEDYDLVLRLLAKGATMRFVPEALYRYRKHGASISHVLRREHIEQMLAAD AALEAALREQCEAVRRAQARRRRSLETALAYDRVICALKARDVPQALGTCAQEPAVWPLLAMPVKARLKRLASRLQPA
Sequences:
>Translated_318_residues MTGQAPLVSVVTANYNGARHLAPAIRSVLGQTLGELELIVADDASTDDSLQVIAEAAAGDARVRVLTAQRNGGPGAARNR ALAAVRGRYVAVFDSDDLMAPDRLEKLVARARGDHANIVVDNLHVFQDGGEAPWKPFLCQKAWAHPRWITLADYIEAGRM YSRQPGLGYLKPLFCAEALRGERYREDLRIGEDYDLVLRLLAKGATMRFVPEALYRYRKHGASISHVLRREHIEQMLAAD AALEAALREQCEAVRRAQARRRRSLETALAYDRVICALKARDVPQALGTCAQEPAVWPLLAMPVKARLKRLASRLQPA >Mature_317_residues TGQAPLVSVVTANYNGARHLAPAIRSVLGQTLGELELIVADDASTDDSLQVIAEAAAGDARVRVLTAQRNGGPGAARNRA LAAVRGRYVAVFDSDDLMAPDRLEKLVARARGDHANIVVDNLHVFQDGGEAPWKPFLCQKAWAHPRWITLADYIEAGRMY SRQPGLGYLKPLFCAEALRGERYREDLRIGEDYDLVLRLLAKGATMRFVPEALYRYRKHGASISHVLRREHIEQMLAADA ALEAALREQCEAVRRAQARRRRSLETALAYDRVICALKARDVPQALGTCAQEPAVWPLLAMPVKARLKRLASRLQPA
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fifth sugar (glucose), catalyzes the formation of a beta-1,6 linkage between the fourth and fifth sugar [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=240, Percent_Identity=24.5833333333333, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1788372, Length=227, Percent_Identity=25.9911894273128, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 35116; Mature: 34985
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGQAPLVSVVTANYNGARHLAPAIRSVLGQTLGELELIVADDASTDDSLQVIAEAAAGD CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCC ARVRVLTAQRNGGPGAARNRALAAVRGRYVAVFDSDDLMAPDRLEKLVARARGDHANIVV CEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE DNLHVFQDGGEAPWKPFLCQKAWAHPRWITLADYIEAGRMYSRQPGLGYLKPLFCAEALR ECEEEEECCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH GERYREDLRIGEDYDLVLRLLAKGATMRFVPEALYRYRKHGASISHVLRREHIEQMLAAD HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AALEAALREQCEAVRRAQARRRRSLETALAYDRVICALKARDVPQALGTCAQEPAVWPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHH AMPVKARLKRLASRLQPA HHHHHHHHHHHHHHCCCC >Mature Secondary Structure TGQAPLVSVVTANYNGARHLAPAIRSVLGQTLGELELIVADDASTDDSLQVIAEAAAGD CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCC ARVRVLTAQRNGGPGAARNRALAAVRGRYVAVFDSDDLMAPDRLEKLVARARGDHANIVV CEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE DNLHVFQDGGEAPWKPFLCQKAWAHPRWITLADYIEAGRMYSRQPGLGYLKPLFCAEALR ECEEEEECCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH GERYREDLRIGEDYDLVLRLLAKGATMRFVPEALYRYRKHGASISHVLRREHIEQMLAAD HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AALEAALREQCEAVRRAQARRRRSLETALAYDRVICALKARDVPQALGTCAQEPAVWPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHH AMPVKARLKRLASRLQPA HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]