| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104593
Identifier: 197104593
GI number: 197104593
Start: 1288995
End: 1290230
Strand: Reverse
Name: 197104593
Synonym: PHZ_c1127
Alternate gene names: NA
Gene position: 1290230-1288995 (Counterclockwise)
Preceding gene: 197104597
Following gene: 197104585
Centisome position: 32.29
GC content: 73.38
Gene sequence:
>1236_bases ATGAAGTTCGTGCTGATGAAGGGGCAGTCGCAGTACGGCTCGCTGCGGCTGCACGTCGACCAGCTCGCCGCCGCCCTGCG CGAGCTGGCGCACGAGGTCCAGGTGGTCGACCTGGCGGCGCCCGAGGGCCAGGGCGAGCTGCAGGCGACCTTCGGCGCCC CGCCGGACTGCTACTTCGGGATCGGCGGGCTCGGCGCCGAGCTCTCCAGCGGCGGAGCCTCGGTCTACGACCAGCTCGGG GTCGTCTACGCCACCCTGCACGTGGATCATCCCGTCCACCAGGCGCCCCGGGTGACCGCGCCGATCCGCCGGCACGTCGC CTTCTTCCTCGACCGCAGCCATGTGCAGTTCGTCTCGGCCTGGCCGACGGCGAAGATCGCCCAGGTGGGCTTCCTGCCCC CCGGCGCCAACGAGCTGCCCGAGCCGGTGGACGCCTCGGACGAGGCGTTCGGCGCCCGCGACATTCCCCTGCTCTTCACC GGCACCTACCGCGGCGCGCCGCAGCCGGCCTGGGCGGCCTGGGAGGCCAGCCCGGCCCGGGACCTGGTGGCCGAGGTCGC CGACCGGATGGCGGCCGACGCCCGCCTGCCGATCCTGGATGCGCTGAAGGCCGCCATGGCCGCCCGCGGCGCCCAGCTCA CCGCCGACCTGTTCGACCAGCTCGTGCCCCTGCTGCAAACCCCGCAGGCGTTCGCCGAGGCCTACCACCGCGACCGGCTG CTCCACGCCCTGGGCGCCGCCGGGGCCCCGCTGCACGTCTACGGCAACGGCTGGGAGCCGCTGGCGCAGCGCTATCCGTC CTTCGTCTACGGCGGCGTCGGCAGCTTCGAGGAGACGCTGCACCTGCTGCGGCGCGCGCGGCTGGTGCTCAACACCAACA ACGGCTTCGTCGCCGGCGGCCACGAGCGCGTCTTCACCGCCATGTGCGCGGGCGCGGCGGTCGTCTCGGACGCCAGCCGC TACTACGCCGACGCCTTCAAGGAAGGCCGCGAGATCATCACCTTCGCCTGGAACCGGCTGGACGAGGCGCCGGGCCAGAT CCTGGAGCTGATGTCCGACACGCCAAGGCTCGCGGGGATCGCCCGCGGCGGCTGGAAGCGGGCCATGGCCGAGCACCGCT CGGTCCGATCGCGCCGCCCGCATCGTCAAGGCGGTGAAGCAGGCCCGCTGAGCAGCGCCTCGTATTCCGCCGGCGTGCCG CAGAAGACCACCTCGTCCCGGCCGATCAGCCGGTAG
Upstream 100 bases:
>100_bases GCGCCCCGCCCGCAACGCCGACGCCACGTAAGGGGGCCACGCTTCCATTCCCCGCCCGAACCGCCCTAGACCGGGAACCT CAGCGTTGGGGGAACGGTCG
Downstream 100 bases:
>100_bases CCGATCCGTCGGCCGGCGCGGATCAGGTGATTGTAGATCGGCGCCACATAGAGCTCGGCCGCCTGCGGCGCCTTGCGCTC CTCGGCGAGCGCCCAGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MKFVLMKGQSQYGSLRLHVDQLAAALRELAHEVQVVDLAAPEGQGELQATFGAPPDCYFGIGGLGAELSSGGASVYDQLG VVYATLHVDHPVHQAPRVTAPIRRHVAFFLDRSHVQFVSAWPTAKIAQVGFLPPGANELPEPVDASDEAFGARDIPLLFT GTYRGAPQPAWAAWEASPARDLVAEVADRMAADARLPILDALKAAMAARGAQLTADLFDQLVPLLQTPQAFAEAYHRDRL LHALGAAGAPLHVYGNGWEPLAQRYPSFVYGGVGSFEETLHLLRRARLVLNTNNGFVAGGHERVFTAMCAGAAVVSDASR YYADAFKEGREIITFAWNRLDEAPGQILELMSDTPRLAGIARGGWKRAMAEHRSVRSRRPHRQGGEAGPLSSASYSAGVP QKTTSSRPISR
Sequences:
>Translated_411_residues MKFVLMKGQSQYGSLRLHVDQLAAALRELAHEVQVVDLAAPEGQGELQATFGAPPDCYFGIGGLGAELSSGGASVYDQLG VVYATLHVDHPVHQAPRVTAPIRRHVAFFLDRSHVQFVSAWPTAKIAQVGFLPPGANELPEPVDASDEAFGARDIPLLFT GTYRGAPQPAWAAWEASPARDLVAEVADRMAADARLPILDALKAAMAARGAQLTADLFDQLVPLLQTPQAFAEAYHRDRL LHALGAAGAPLHVYGNGWEPLAQRYPSFVYGGVGSFEETLHLLRRARLVLNTNNGFVAGGHERVFTAMCAGAAVVSDASR YYADAFKEGREIITFAWNRLDEAPGQILELMSDTPRLAGIARGGWKRAMAEHRSVRSRRPHRQGGEAGPLSSASYSAGVP QKTTSSRPISR >Mature_411_residues MKFVLMKGQSQYGSLRLHVDQLAAALRELAHEVQVVDLAAPEGQGELQATFGAPPDCYFGIGGLGAELSSGGASVYDQLG VVYATLHVDHPVHQAPRVTAPIRRHVAFFLDRSHVQFVSAWPTAKIAQVGFLPPGANELPEPVDASDEAFGARDIPLLFT GTYRGAPQPAWAAWEASPARDLVAEVADRMAADARLPILDALKAAMAARGAQLTADLFDQLVPLLQTPQAFAEAYHRDRL LHALGAAGAPLHVYGNGWEPLAQRYPSFVYGGVGSFEETLHLLRRARLVLNTNNGFVAGGHERVFTAMCAGAAVVSDASR YYADAFKEGREIITFAWNRLDEAPGQILELMSDTPRLAGIARGGWKRAMAEHRSVRSRRPHRQGGEAGPLSSASYSAGVP QKTTSSRPISR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44244; Mature: 44244
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVLMKGQSQYGSLRLHVDQLAAALRELAHEVQVVDLAAPEGQGELQATFGAPPDCYFG CEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEECCCCCCCEEC IGGLGAELSSGGASVYDQLGVVYATLHVDHPVHQAPRVTAPIRRHVAFFLDRSHVQFVSA CCCCCCHHCCCCHHHHHHHHHEEEEEECCCCHHCCCCCHHHHHHHHHHHHHHCHHHEECC WPTAKIAQVGFLPPGANELPEPVDASDEAFGARDIPLLFTGTYRGAPQPAWAAWEASPAR CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHH DLVAEVADRMAADARLPILDALKAAMAARGAQLTADLFDQLVPLLQTPQAFAEAYHRDRL HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LHALGAAGAPLHVYGNGWEPLAQRYPSFVYGGVGSFEETLHLLRRARLVLNTNNGFVAGG HHHHCCCCCCEEEECCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHEEEECCCCEEECC HERVFTAMCAGAAVVSDASRYYADAFKEGREIITFAWNRLDEAPGQILELMSDTPRLAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHH ARGGWKRAMAEHRSVRSRRPHRQGGEAGPLSSASYSAGVPQKTTSSRPISR HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKFVLMKGQSQYGSLRLHVDQLAAALRELAHEVQVVDLAAPEGQGELQATFGAPPDCYFG CEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEECCCCCCCEEC IGGLGAELSSGGASVYDQLGVVYATLHVDHPVHQAPRVTAPIRRHVAFFLDRSHVQFVSA CCCCCCHHCCCCHHHHHHHHHEEEEEECCCCHHCCCCCHHHHHHHHHHHHHHCHHHEECC WPTAKIAQVGFLPPGANELPEPVDASDEAFGARDIPLLFTGTYRGAPQPAWAAWEASPAR CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHH DLVAEVADRMAADARLPILDALKAAMAARGAQLTADLFDQLVPLLQTPQAFAEAYHRDRL HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LHALGAAGAPLHVYGNGWEPLAQRYPSFVYGGVGSFEETLHLLRRARLVLNTNNGFVAGG HHHHCCCCCCEEEECCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHEEEECCCCEEECC HERVFTAMCAGAAVVSDASRYYADAFKEGREIITFAWNRLDEAPGQILELMSDTPRLAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHH ARGGWKRAMAEHRSVRSRRPHRQGGEAGPLSSASYSAGVPQKTTSSRPISR HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA