| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104546
Identifier: 197104546
GI number: 197104546
Start: 1221069
End: 1221821
Strand: Direct
Name: 197104546
Synonym: PHZ_c1080
Alternate gene names: NA
Gene position: 1221069-1221821 (Clockwise)
Preceding gene: 197104545
Following gene: 197104552
Centisome position: 30.56
GC content: 71.98
Gene sequence:
>753_bases ATGCTGACCGATCCCCTCTTCTACGTCCTCGCCGTGCCGGCGGTGACGATGATGGGGCTGGCCAAGGGCGGCTTCGCCGG CGTCGGCGCCGTGGCCATGCCGCTGCTGGCCCTGGCCATCTCGCCGGTGCAGGCGGCGGCGATCCTGCTGCCGATCCTGA TCGTGCAGGACGTGGTCGGGGTCTGGGCGTTCCGGAAGACCTGGGACCGGGGCGTGCTGGCCCTGATGCTGCCGAGCGCG GCGGCGGGCATCTTCCTGGGCTACCTGCTGGCCGCGCAGGTCTCGGCGGTGGCCGTGCTGGCGACGCTGGGGGCGATCTC GATCCTGTTCGCCGCGCAGCGGCTGTGGAGCCAGCGGGGCGGCCGGGTCGCCGCGCCCTCGAACGCGCCGTGGCCGGTCG GCGCCCTGCTGGGGGTGGCCTCGGGCTTCACCAGCCAGATCGCCCACGCCGGCCAGCCGCCGTTCCAGATGTGGGTGCTG CCGAAGAACCTCTCGCCCGCCAGCCTGGTGGGCACGACCGCGATCTTCTTCGCGGTGGTGAACTGGGTGAAGGTCCCGGC CTACGTCGCCCTCGGCCAGTTCACGCGGGAGAACCTGGCCACCTCGGCGGTGCTGGCGCCGGTGGCGATCGCCTCCACCT TCGCCGGCGTCTGGCTGGTGCGGCGGGTGAAGGCCGAGCGGTTCTACACGATCATCTACGTGCTGATGATCCTGGTGGGC GCGCAGCTGCTGTGGGAGGCCTGGGGTTCTTAG
Upstream 100 bases:
>100_bases GCCTCGGACGCCTCGAAGTTCCACACCGGCGACAGCTTCGTCATCGACGGCGGCTACACGATCTTCTGAGGCCGGACTCG CCCAAGGCCGCCGCGCGCCC
Downstream 100 bases:
>100_bases TGGTCGCGCGTCGGACGGCGAAACCGGCCTCCACTTTCGCCTGACGCGCTCGGGCCTAGTCCGTGAAGACCACCGTCTTG CGGCCGTTGAGGAGCACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Domain Protein; Permease; Transmembrane Protein; DUF81 Family Membrane Protein
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MLTDPLFYVLAVPAVTMMGLAKGGFAGVGAVAMPLLALAISPVQAAAILLPILIVQDVVGVWAFRKTWDRGVLALMLPSA AAGIFLGYLLAAQVSAVAVLATLGAISILFAAQRLWSQRGGRVAAPSNAPWPVGALLGVASGFTSQIAHAGQPPFQMWVL PKNLSPASLVGTTAIFFAVVNWVKVPAYVALGQFTRENLATSAVLAPVAIASTFAGVWLVRRVKAERFYTIIYVLMILVG AQLLWEAWGS
Sequences:
>Translated_250_residues MLTDPLFYVLAVPAVTMMGLAKGGFAGVGAVAMPLLALAISPVQAAAILLPILIVQDVVGVWAFRKTWDRGVLALMLPSA AAGIFLGYLLAAQVSAVAVLATLGAISILFAAQRLWSQRGGRVAAPSNAPWPVGALLGVASGFTSQIAHAGQPPFQMWVL PKNLSPASLVGTTAIFFAVVNWVKVPAYVALGQFTRENLATSAVLAPVAIASTFAGVWLVRRVKAERFYTIIYVLMILVG AQLLWEAWGS >Mature_250_residues MLTDPLFYVLAVPAVTMMGLAKGGFAGVGAVAMPLLALAISPVQAAAILLPILIVQDVVGVWAFRKTWDRGVLALMLPSA AAGIFLGYLLAAQVSAVAVLATLGAISILFAAQRLWSQRGGRVAAPSNAPWPVGALLGVASGFTSQIAHAGQPPFQMWVL PKNLSPASLVGTTAIFFAVVNWVKVPAYVALGQFTRENLATSAVLAPVAIASTFAGVWLVRRVKAERFYTIIYVLMILVG AQLLWEAWGS
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26225; Mature: 26225
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTDPLFYVLAVPAVTMMGLAKGGFAGVGAVAMPLLALAISPVQAAAILLPILIVQDVVG CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWAFRKTWDRGVLALMLPSAAAGIFLGYLLAAQVSAVAVLATLGAISILFAAQRLWSQRG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GRVAAPSNAPWPVGALLGVASGFTSQIAHAGQPPFQMWVLPKNLSPASLVGTTAIFFAVV CEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH NWVKVPAYVALGQFTRENLATSAVLAPVAIASTFAGVWLVRRVKAERFYTIIYVLMILVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLLWEAWGS HHHHHHHHCC >Mature Secondary Structure MLTDPLFYVLAVPAVTMMGLAKGGFAGVGAVAMPLLALAISPVQAAAILLPILIVQDVVG CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWAFRKTWDRGVLALMLPSAAAGIFLGYLLAAQVSAVAVLATLGAISILFAAQRLWSQRG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GRVAAPSNAPWPVGALLGVASGFTSQIAHAGQPPFQMWVLPKNLSPASLVGTTAIFFAVV CEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH NWVKVPAYVALGQFTRENLATSAVLAPVAIASTFAGVWLVRRVKAERFYTIIYVLMILVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLLWEAWGS HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA