Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197104546

Identifier: 197104546

GI number: 197104546

Start: 1221069

End: 1221821

Strand: Direct

Name: 197104546

Synonym: PHZ_c1080

Alternate gene names: NA

Gene position: 1221069-1221821 (Clockwise)

Preceding gene: 197104545

Following gene: 197104552

Centisome position: 30.56

GC content: 71.98

Gene sequence:

>753_bases
ATGCTGACCGATCCCCTCTTCTACGTCCTCGCCGTGCCGGCGGTGACGATGATGGGGCTGGCCAAGGGCGGCTTCGCCGG
CGTCGGCGCCGTGGCCATGCCGCTGCTGGCCCTGGCCATCTCGCCGGTGCAGGCGGCGGCGATCCTGCTGCCGATCCTGA
TCGTGCAGGACGTGGTCGGGGTCTGGGCGTTCCGGAAGACCTGGGACCGGGGCGTGCTGGCCCTGATGCTGCCGAGCGCG
GCGGCGGGCATCTTCCTGGGCTACCTGCTGGCCGCGCAGGTCTCGGCGGTGGCCGTGCTGGCGACGCTGGGGGCGATCTC
GATCCTGTTCGCCGCGCAGCGGCTGTGGAGCCAGCGGGGCGGCCGGGTCGCCGCGCCCTCGAACGCGCCGTGGCCGGTCG
GCGCCCTGCTGGGGGTGGCCTCGGGCTTCACCAGCCAGATCGCCCACGCCGGCCAGCCGCCGTTCCAGATGTGGGTGCTG
CCGAAGAACCTCTCGCCCGCCAGCCTGGTGGGCACGACCGCGATCTTCTTCGCGGTGGTGAACTGGGTGAAGGTCCCGGC
CTACGTCGCCCTCGGCCAGTTCACGCGGGAGAACCTGGCCACCTCGGCGGTGCTGGCGCCGGTGGCGATCGCCTCCACCT
TCGCCGGCGTCTGGCTGGTGCGGCGGGTGAAGGCCGAGCGGTTCTACACGATCATCTACGTGCTGATGATCCTGGTGGGC
GCGCAGCTGCTGTGGGAGGCCTGGGGTTCTTAG

Upstream 100 bases:

>100_bases
GCCTCGGACGCCTCGAAGTTCCACACCGGCGACAGCTTCGTCATCGACGGCGGCTACACGATCTTCTGAGGCCGGACTCG
CCCAAGGCCGCCGCGCGCCC

Downstream 100 bases:

>100_bases
TGGTCGCGCGTCGGACGGCGAAACCGGCCTCCACTTTCGCCTGACGCGCTCGGGCCTAGTCCGTGAAGACCACCGTCTTG
CGGCCGTTGAGGAGCACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Domain Protein; Permease; Transmembrane Protein; DUF81 Family Membrane Protein

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MLTDPLFYVLAVPAVTMMGLAKGGFAGVGAVAMPLLALAISPVQAAAILLPILIVQDVVGVWAFRKTWDRGVLALMLPSA
AAGIFLGYLLAAQVSAVAVLATLGAISILFAAQRLWSQRGGRVAAPSNAPWPVGALLGVASGFTSQIAHAGQPPFQMWVL
PKNLSPASLVGTTAIFFAVVNWVKVPAYVALGQFTRENLATSAVLAPVAIASTFAGVWLVRRVKAERFYTIIYVLMILVG
AQLLWEAWGS

Sequences:

>Translated_250_residues
MLTDPLFYVLAVPAVTMMGLAKGGFAGVGAVAMPLLALAISPVQAAAILLPILIVQDVVGVWAFRKTWDRGVLALMLPSA
AAGIFLGYLLAAQVSAVAVLATLGAISILFAAQRLWSQRGGRVAAPSNAPWPVGALLGVASGFTSQIAHAGQPPFQMWVL
PKNLSPASLVGTTAIFFAVVNWVKVPAYVALGQFTRENLATSAVLAPVAIASTFAGVWLVRRVKAERFYTIIYVLMILVG
AQLLWEAWGS
>Mature_250_residues
MLTDPLFYVLAVPAVTMMGLAKGGFAGVGAVAMPLLALAISPVQAAAILLPILIVQDVVGVWAFRKTWDRGVLALMLPSA
AAGIFLGYLLAAQVSAVAVLATLGAISILFAAQRLWSQRGGRVAAPSNAPWPVGALLGVASGFTSQIAHAGQPPFQMWVL
PKNLSPASLVGTTAIFFAVVNWVKVPAYVALGQFTRENLATSAVLAPVAIASTFAGVWLVRRVKAERFYTIIYVLMILVG
AQLLWEAWGS

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26225; Mature: 26225

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA