| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104532
Identifier: 197104532
GI number: 197104532
Start: 1201415
End: 1201957
Strand: Reverse
Name: 197104532
Synonym: PHZ_c1066
Alternate gene names: NA
Gene position: 1201957-1201415 (Counterclockwise)
Preceding gene: 197104533
Following gene: 197104531
Centisome position: 30.08
GC content: 72.01
Gene sequence:
>543_bases ATGTCGAAGATCCTGCCCGCCCTCGCCCGCCTCGCCGCCGCCGCGGCCGCCGTGTGCGCCGTCGGCGGGACCGCGCATGC GCAGACGAGCACCACGACCTCGACCACCGCCAGCATGAACATCACCCAGCCGCTGCAGCTGACGAAGGTCACCGACCTGG TGTTCGGCACCATCATGCGGCCGACGTCGGGCAGCGGGAACGTCATCATCGACGCCCAGTCCGGAAACCGGAACGTCACC GGCAACGCCAGCGGCGTGACCGGCGGCTCGGCCGCCACCCCGACCCGCGCGGCGTTCACCGTCTCGGGCGAGGCGGGCAT GAACATCACCGTCACCGTGCCGGGCTCCATGACCATGACCCGCGGCGGCGCCGATCCGATCACCGTCAGCCTGAACTCCA CCATGGGCGGGGGCCAGCTCTCCGGTCCGACCGGCGGCACCGGGACGGCCGCCTTCGGCGTCGGCGGCCAGCTCGCCATC AGCGACAGCACCCCGCCCGGCGCCTACACCGGCACCTTCAACGTGACCGTCGCCTACAACTAG
Upstream 100 bases:
>100_bases TTTGGAAGCTGGCCCGGACCTTGCTCGCCCGGGGCGGGGTCAGTATGGCCAAGTTCCGTTTCGGACCAGTCCGGGACGGC CAGTCTCCGGAGCGCGTACC
Downstream 100 bases:
>100_bases GCTTGCCAAGCCGGAACGCATGGGGAACATTGTTCCTCATGCGCGGTCTGGCCGGCATAGAGGACGCCTCCGGCGCGCCC GATCTCTTCGCGGCGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSKILPALARLAAAAAAVCAVGGTAHAQTSTTTSTTASMNITQPLQLTKVTDLVFGTIMRPTSGSGNVIIDAQSGNRNVT GNASGVTGGSAATPTRAAFTVSGEAGMNITVTVPGSMTMTRGGADPITVSLNSTMGGGQLSGPTGGTGTAAFGVGGQLAI SDSTPPGAYTGTFNVTVAYN
Sequences:
>Translated_180_residues MSKILPALARLAAAAAAVCAVGGTAHAQTSTTTSTTASMNITQPLQLTKVTDLVFGTIMRPTSGSGNVIIDAQSGNRNVT GNASGVTGGSAATPTRAAFTVSGEAGMNITVTVPGSMTMTRGGADPITVSLNSTMGGGQLSGPTGGTGTAAFGVGGQLAI SDSTPPGAYTGTFNVTVAYN >Mature_179_residues SKILPALARLAAAAAAVCAVGGTAHAQTSTTTSTTASMNITQPLQLTKVTDLVFGTIMRPTSGSGNVIIDAQSGNRNVTG NASGVTGGSAATPTRAAFTVSGEAGMNITVTVPGSMTMTRGGADPITVSLNSTMGGGQLSGPTGGTGTAAFGVGGQLAIS DSTPPGAYTGTFNVTVAYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17444; Mature: 17313
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKILPALARLAAAAAAVCAVGGTAHAQTSTTTSTTASMNITQPLQLTKVTDLVFGTIMR CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHEEC PTSGSGNVIIDAQSGNRNVTGNASGVTGGSAATPTRAAFTVSGEAGMNITVTVPGSMTMT CCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEE RGGADPITVSLNSTMGGGQLSGPTGGTGTAAFGVGGQLAISDSTPPGAYTGTFNVTVAYN CCCCCEEEEEECCCCCCCEECCCCCCCCEEEECCCCEEEECCCCCCCCEEEEEEEEEEEC >Mature Secondary Structure SKILPALARLAAAAAAVCAVGGTAHAQTSTTTSTTASMNITQPLQLTKVTDLVFGTIMR CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHEEC PTSGSGNVIIDAQSGNRNVTGNASGVTGGSAATPTRAAFTVSGEAGMNITVTVPGSMTMT CCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEE RGGADPITVSLNSTMGGGQLSGPTGGTGTAAFGVGGQLAISDSTPPGAYTGTFNVTVAYN CCCCCEEEEEECCCCCCCEECCCCCCCCEEEECCCCEEEECCCCCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA