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The map label for this gene is 197104497

Identifier: 197104497

GI number: 197104497

Start: 1148616

End: 1150835

Strand: Reverse

Name: 197104497

Synonym: PHZ_c1031

Alternate gene names: NA

Gene position: 1150835-1148616 (Counterclockwise)

Preceding gene: 197104498

Following gene: 197104495

Centisome position: 28.8

GC content: 74.05

Gene sequence:

>2220_bases
ATGCGTCACGCACCGCGTCCAATCGTCGACTGTCAGGGGGAAATCGGCCGGCTCCGCTCGGGTCCAGGGGAATGCGAGGG
GAGTGTGCGGAGCCGGCCTTTCCGACCGTCACGCGGGGGGGGGCTTCGTGCGGTCGGATCGGAAAACGCCGTTCCGGATT
CGGCGTTCCCGCCGCCGTCGCATTTTTTCTCACGCCCCGCCCCAGCGTCCATTCGCCCCACGACGAACCCCCTCGCCGGG
CCCGCCTCCCGCGTGCGAGGCTCAGGGCGGAACGCGGGTTCCGCGGACGCGTTACGGTGCAGCTGGTTCGAGGGGGGAAC
GGCCATTTCGCAGACCATCGCGCCTCAGCCCGGCCCGACGGCCGCCGGCGATCTGGAGCGCCGGGTCGCCGACATCCTCG
ACGGCCTGGGCGAAGGATTCATCACCTTCGACCTCGCCTGGCGGATCACCTACTGCAACCGCGCCGCCGCGACCCACCTG
GGCCTCGATCCCGAGACCGCGCTCGGCCAGGTCATCTGGGACCTCGTCGACAACCCGCCCGAGGGCGCCCTGCGGCGCTT
CCTCGCCCGGGCGATGGCCGAGCGGATCACCGCCGAGGAGGAGGTCCCCTCCGACCTGCATCCCGGCCGCTGGCTGCAGT
TCCGCGTCTTCCCGCTGCACGACGGGCTCTGCCTGAACTTCCGCGACGTGACCGAGCGGCGGGCGCAGGCCCAGCGCGAA
CGCGCCCAGGCCGAGCGCCTGGCCCAGCTCGAGAGCCGCCGCGCCTTCATGCTCGAGGTCGCCGACACCCTGCGCGCCCT
CTCCGATCCCGAGCAGATCCTCGCCGCCGCCGCGCGCCTGCTGGGCGAGCGGCTCGGCGCGGCCCGCACCGGCTACGCCC
AGATCAGCGAGGACGGCGCGCGGATGGTCATCCTCGGCGACTGGAGCCGCGGCGACGTCGAGCGCCTCACCGGCGTCACC
CTCTCCCTCGACATCTTCGGCTCCGAGGCGCTCGCGACGCTCAAGGCCGACCGCCCGCTGTTGATCCGGGACGTGACCAC
CGATCCGCGCACCGCCGCCTTCGCCGAAGGCTACCGCGGCGTGCAGGTGGGCGCCCTGCTCGACGTGCCGCTGGTGCGCG
AGGGCCGGCTCGAGGCCTTCGTCTTCTCCAGCTGCCCCGAGCCCCACGCCTGGACGCCCGAGGACGTGGCCCTGGCCGAG
GACGTCGCCGCCCGCACCTGGTCGGCCCTGGGCCGCGCCCGCTCCGAGATCGCCCTGCGCGAGAGCGAGGCCCGCTTCCG
CGCCATGGCCGACAGCGCCCCGGCCCCCGTCTGGGTGACCAGCGCCGCCGGCGGCATCGAGTTCGTCAACCGCGCCTTCA
GCGAGCTGGCGGGCAAGTCCCCGGAAGAGCTGATGGGGAACGCCTGGCTCGCCCTGATGCATCCCGAGGACCTCCAGCGG
GTCGGCCCGGTGCGCGAGGCCGCGCTCGCCGAGCTGACGCCCTTCAACTGGACCGCCCGCTTCCGCGGCGCCGATGGCCA
GTACCGCTGGATGCGGGCGTCCTCCCAGCCCCGGTTCGACTCCTCGGGCGCCTTCCAGGGCTATGTCGGCATCGCCATGG
ACGTCACCGACGCCCGCCGCGCCCAGGAGCGCCAGCAGCTGCTCATCAACGAGCTGAACCACCGGGTGAAGAACACCCTG
GCCACCGTCCAGTCGCTGGCCCACCAGACCCTGCGCGAGGGGATGGTCACCCGCGAGGCCCGCGACCGGTTCACCGACCG
GCTCCTGGCGCTCTCGGCCGCCCACAACGTCCTGACCCGCGAGAACTGGGAGAGCGCCGAGCTGTCCGAGATCGCCCGCG
AGGCGGTGCGGCCCTACAACGACCCGCAGGCGCCGCGCGTCCTTCTGGAGGGCCCCACCGCCCGGGTCGCGCCGAACGTG
GCGCTCGCCGTCTCCATGGCGCTGCACGAGCTCGCCACCAACGCGGTGAAGTACGGCGCCCTCTCCGTCCCCGGCGGCCG
CGTCGCCGTGGCCTGGCGCTTCGCCCCGGCCGGAGACGCCGTCGAGCTGGAATGGCGCGAGACCGGCGGCCCGCCCGTCA
CCCCGCCGGAAGGCCGGGGCTCCGGCTTCGGCTCGCGCCTGCTGATCCAGGGCCTCGCCGCCGAACTCGGCGCCCCCGCC
GAACTCGACTACCGCCCCGAAGGCGTCGTCTGCCGCCTCCGCGCCCCCCTCGCCCGCTGA

Upstream 100 bases:

>100_bases
TAGCGGTGGAGGGGGCCGGCCCCATCCGCCGAGCTAGGTGGCGAGCCCCCACCACCATGCTGCGCATGCTCCCCCACCCC
GATGGGGGAGGAGGTGCGTG

Downstream 100 bases:

>100_bases
CGCCCGCCCCCTCCTCCCCCGAGGGGGGAGGAGGGGGACAGCCTGCCCGTCCATCTACGCTCCCAAGGCGACCCTCAGCC
GGGCGCCGAAGCCGCGCCCT

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 739; Mature: 739

Protein sequence:

>739_residues
MRHAPRPIVDCQGEIGRLRSGPGECEGSVRSRPFRPSRGGGLRAVGSENAVPDSAFPPPSHFFSRPAPASIRPTTNPLAG
PASRVRGSGRNAGSADALRCSWFEGGTAISQTIAPQPGPTAAGDLERRVADILDGLGEGFITFDLAWRITYCNRAAATHL
GLDPETALGQVIWDLVDNPPEGALRRFLARAMAERITAEEEVPSDLHPGRWLQFRVFPLHDGLCLNFRDVTERRAQAQRE
RAQAERLAQLESRRAFMLEVADTLRALSDPEQILAAAARLLGERLGAARTGYAQISEDGARMVILGDWSRGDVERLTGVT
LSLDIFGSEALATLKADRPLLIRDVTTDPRTAAFAEGYRGVQVGALLDVPLVREGRLEAFVFSSCPEPHAWTPEDVALAE
DVAARTWSALGRARSEIALRESEARFRAMADSAPAPVWVTSAAGGIEFVNRAFSELAGKSPEELMGNAWLALMHPEDLQR
VGPVREAALAELTPFNWTARFRGADGQYRWMRASSQPRFDSSGAFQGYVGIAMDVTDARRAQERQQLLINELNHRVKNTL
ATVQSLAHQTLREGMVTREARDRFTDRLLALSAAHNVLTRENWESAELSEIAREAVRPYNDPQAPRVLLEGPTARVAPNV
ALAVSMALHELATNAVKYGALSVPGGRVAVAWRFAPAGDAVELEWRETGGPPVTPPEGRGSGFGSRLLIQGLAAELGAPA
ELDYRPEGVVCRLRAPLAR

Sequences:

>Translated_739_residues
MRHAPRPIVDCQGEIGRLRSGPGECEGSVRSRPFRPSRGGGLRAVGSENAVPDSAFPPPSHFFSRPAPASIRPTTNPLAG
PASRVRGSGRNAGSADALRCSWFEGGTAISQTIAPQPGPTAAGDLERRVADILDGLGEGFITFDLAWRITYCNRAAATHL
GLDPETALGQVIWDLVDNPPEGALRRFLARAMAERITAEEEVPSDLHPGRWLQFRVFPLHDGLCLNFRDVTERRAQAQRE
RAQAERLAQLESRRAFMLEVADTLRALSDPEQILAAAARLLGERLGAARTGYAQISEDGARMVILGDWSRGDVERLTGVT
LSLDIFGSEALATLKADRPLLIRDVTTDPRTAAFAEGYRGVQVGALLDVPLVREGRLEAFVFSSCPEPHAWTPEDVALAE
DVAARTWSALGRARSEIALRESEARFRAMADSAPAPVWVTSAAGGIEFVNRAFSELAGKSPEELMGNAWLALMHPEDLQR
VGPVREAALAELTPFNWTARFRGADGQYRWMRASSQPRFDSSGAFQGYVGIAMDVTDARRAQERQQLLINELNHRVKNTL
ATVQSLAHQTLREGMVTREARDRFTDRLLALSAAHNVLTRENWESAELSEIAREAVRPYNDPQAPRVLLEGPTARVAPNV
ALAVSMALHELATNAVKYGALSVPGGRVAVAWRFAPAGDAVELEWRETGGPPVTPPEGRGSGFGSRLLIQGLAAELGAPA
ELDYRPEGVVCRLRAPLAR
>Mature_739_residues
MRHAPRPIVDCQGEIGRLRSGPGECEGSVRSRPFRPSRGGGLRAVGSENAVPDSAFPPPSHFFSRPAPASIRPTTNPLAG
PASRVRGSGRNAGSADALRCSWFEGGTAISQTIAPQPGPTAAGDLERRVADILDGLGEGFITFDLAWRITYCNRAAATHL
GLDPETALGQVIWDLVDNPPEGALRRFLARAMAERITAEEEVPSDLHPGRWLQFRVFPLHDGLCLNFRDVTERRAQAQRE
RAQAERLAQLESRRAFMLEVADTLRALSDPEQILAAAARLLGERLGAARTGYAQISEDGARMVILGDWSRGDVERLTGVT
LSLDIFGSEALATLKADRPLLIRDVTTDPRTAAFAEGYRGVQVGALLDVPLVREGRLEAFVFSSCPEPHAWTPEDVALAE
DVAARTWSALGRARSEIALRESEARFRAMADSAPAPVWVTSAAGGIEFVNRAFSELAGKSPEELMGNAWLALMHPEDLQR
VGPVREAALAELTPFNWTARFRGADGQYRWMRASSQPRFDSSGAFQGYVGIAMDVTDARRAQERQQLLINELNHRVKNTL
ATVQSLAHQTLREGMVTREARDRFTDRLLALSAAHNVLTRENWESAELSEIAREAVRPYNDPQAPRVLLEGPTARVAPNV
ALAVSMALHELATNAVKYGALSVPGGRVAVAWRFAPAGDAVELEWRETGGPPVTPPEGRGSGFGSRLLIQGLAAELGAPA
ELDYRPEGVVCRLRAPLAR

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR013655
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 80239; Mature: 80239

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHAPRPIVDCQGEIGRLRSGPGECEGSVRSRPFRPSRGGGLRAVGSENAVPDSAFPPPS
CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCH
HFFSRPAPASIRPTTNPLAGPASRVRGSGRNAGSADALRCSWFEGGTAISQTIAPQPGPT
HHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCC
AAGDLERRVADILDGLGEGFITFDLAWRITYCNRAAATHLGLDPETALGQVIWDLVDNPP
CCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHCCCCCHHHHHHHHHHHHCCCC
EGALRRFLARAMAERITAEEEVPSDLHPGRWLQFRVFPLHDGLCLNFRDVTERRAQAQRE
HHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEEEEECCCCEECHHHHHHHHHHHHHH
RAQAERLAQLESRRAFMLEVADTLRALSDPEQILAAAARLLGERLGAARTGYAQISEDGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
RMVILGDWSRGDVERLTGVTLSLDIFGSEALATLKADRPLLIRDVTTDPRTAAFAEGYRG
EEEEEECCCCCCHHHHCCCEEEEEECCCHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCC
VQVGALLDVPLVREGRLEAFVFSSCPEPHAWTPEDVALAEDVAARTWSALGRARSEIALR
EEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ESEARFRAMADSAPAPVWVTSAAGGIEFVNRAFSELAGKSPEELMGNAWLALMHPEDLQR
HHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCEEEEECHHHHHH
VGPVREAALAELTPFNWTARFRGADGQYRWMRASSQPRFDSSGAFQGYVGIAMDVTDARR
HCCHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECHHHHH
AQERQQLLINELNHRVKNTLATVQSLAHQTLREGMVTREARDRFTDRLLALSAAHNVLTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ENWESAELSEIAREAVRPYNDPQAPRVLLEGPTARVAPNVALAVSMALHELATNAVKYGA
CCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCE
LSVPGGRVAVAWRFAPAGDAVELEWRETGGPPVTPPEGRGSGFGSRLLIQGLAAELGAPA
EECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
ELDYRPEGVVCRLRAPLAR
CCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MRHAPRPIVDCQGEIGRLRSGPGECEGSVRSRPFRPSRGGGLRAVGSENAVPDSAFPPPS
CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCH
HFFSRPAPASIRPTTNPLAGPASRVRGSGRNAGSADALRCSWFEGGTAISQTIAPQPGPT
HHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCC
AAGDLERRVADILDGLGEGFITFDLAWRITYCNRAAATHLGLDPETALGQVIWDLVDNPP
CCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHCCCCCHHHHHHHHHHHHCCCC
EGALRRFLARAMAERITAEEEVPSDLHPGRWLQFRVFPLHDGLCLNFRDVTERRAQAQRE
HHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEEEEECCCCEECHHHHHHHHHHHHHH
RAQAERLAQLESRRAFMLEVADTLRALSDPEQILAAAARLLGERLGAARTGYAQISEDGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
RMVILGDWSRGDVERLTGVTLSLDIFGSEALATLKADRPLLIRDVTTDPRTAAFAEGYRG
EEEEEECCCCCCHHHHCCCEEEEEECCCHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCC
VQVGALLDVPLVREGRLEAFVFSSCPEPHAWTPEDVALAEDVAARTWSALGRARSEIALR
EEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ESEARFRAMADSAPAPVWVTSAAGGIEFVNRAFSELAGKSPEELMGNAWLALMHPEDLQR
HHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCEEEEECHHHHHH
VGPVREAALAELTPFNWTARFRGADGQYRWMRASSQPRFDSSGAFQGYVGIAMDVTDARR
HCCHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECHHHHH
AQERQQLLINELNHRVKNTLATVQSLAHQTLREGMVTREARDRFTDRLLALSAAHNVLTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ENWESAELSEIAREAVRPYNDPQAPRVLLEGPTARVAPNVALAVSMALHELATNAVKYGA
CCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCE
LSVPGGRVAVAWRFAPAGDAVELEWRETGGPPVTPPEGRGSGFGSRLLIQGLAAELGAPA
EECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
ELDYRPEGVVCRLRAPLAR
CCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA