| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is purL [H]
Identifier: 197104476
GI number: 197104476
Start: 1121052
End: 1123247
Strand: Reverse
Name: purL [H]
Synonym: PHZ_c1010
Alternate gene names: 197104476
Gene position: 1123247-1121052 (Counterclockwise)
Preceding gene: 197104478
Following gene: 197104475
Centisome position: 28.11
GC content: 71.17
Gene sequence:
>2196_bases ATGAGCGCCCAGCCCGCAAAGACCATGGCCGAGAAGGCCGCCGAGTACGGCCTGAAGCCCGAGGAATACGACCTCATCGT CAAGCGCCTGAACCGCGAGCCCAACGACGTGGAGCTGGGCGTGTTCTCGGTGATGTGGTCCGAGCACTGCTCGTACAAGA GCTCGCGCAAGCACCTGGTGAAGTTCCCGACCAAGGGGCCGCGCGTGATCCAGGGGCCGGGCGAGAACGCCGGGGTCATC GACATCGGCGACGGACAAGCCTGCATCTTCAAGATGGAGAGCCACAACCACCCGTCCTACATCGAGCCCTACCAGGGCGC GGCGACGGGCGTCGGCGGCATCATGCGCGACGTCTTCACCATGGGCGCGCGGCCGGTGGCGCTGCTGAACGCCCTGCGGT TCGGCGATCCCGCGCATCCGAAGACGAAGCGCCTGGTCTCGGGCGTGGTCTCCGGCATCGGCGGCTACGGCAACTGCGTG GGCGTGCCCACCGTCGCGGGCGAGACCAACTTCCACCGCGGCTACGACGGCAACATCCTGGTCAACGCCATGTGCGTGGG CCTGGCCGACGCCGACAAGATCTTCTACTCGGCCGCCCCCGCGCCCGGCCTGCCGGTGGTCTACTTCGGCTCCAAGACCG GCCGCGACGGCATCCACGGCGCGACCATGGCCTCGGCCGAGTTCGACGACGCCTCGGAAGAGAAGCGCCCCACCGTCCAG GTGGGCGACCCCTTCGCCGAGAAGCTGCTGATCGAGGCCACGCTGGAGTTGATGGCCTCGGGCGCCGTGGCCGCGATCCA GGACATGGGCGCGGCCGGCCTCACCTCCTCGTCGGTCGAGATGGCCGGCAAGGGCGGCGTCGGCATCGAGCTCGACCTCG ACGCCGTGCCCCAGCGCGAGGAGGGCATGACCGCCTACGAGATGATGCTGTCCGAGAGCCAGGAGCGCATGCTGGCGATC CTGAAGCCCGGCCGCGAGGCCGATGGCCACCGCATCTTCCAGAAGTGGGGCCTGGACGCCGCGGTGATCGGCAGGACCAC CGACACCGGCCACATCGTGCTGAAGCACCAGGGCCAGGTAGTCTGCGACGTGCCGCTCGCCCCGCTGTCGGACGACGCCC CGCTCTACGACCGCCCCTGGGTCGCCCCCGAGGCCGCGCCCCGGCTCGACCCGGCCGACGTCCCGGCCCCCGGCGACTGG AAGGCCGCGGTGCTCAAGCTGATGAGCGCCCCCGACATGGCCTCCAAGCGCTGGATCTGGGAACAGTACGACCGCCACGT CATGGCCGACACGCTGGAGGATTCGGCCACCGGCGCCGACGCCGGCATCGTGCGCGTCCACGGGACCCGCAAGGCGTTGG CCGTCACCTCCGACTGCACGCCCCGCTACGTCCAGAACGACCCCTACGAGGGCGGCAAGCAGGCCGTCGCCGAGGCCTGG CGCAACGTCACCGCCGTGGGCGCCCTGCCGATCGCCATCACCGACAACCTGAACTTCGGCAACCCCGAGCGGCCCGAGAT CATGGGCCAGATCGTGCGCGCCATCGAAGGCATGGCCGAGGCCTGCCGCGAGCTGGACTTCCCGGTCGTGAGCGGCAACG TCAGCCTCTACAACGAGACCAACGGCGTCGCCATTCCCCCCACCCCCACCGTGGGCGGCGTCGGCCTGATCGAGGACTAC GCCCACCGCGCCGACTTCTCGAACCTGGCGGCCGGCGAGGCCCTGGTGCTGGTCGGCGAGACCCAGGGCGAACTCGGCGC CTCCATGTACCTGCGCGAGATGCTGGGCCGCGAGGACGGCGCCCCGCCACCGGTGGACCTGGCCGTCGAGCGCCGCCACG GCGCCTTCGTGCGCGAACTGATCCGCACGGACCGGGCCCGGACCGTCCACGACCTCTCCGACGGCGGCCTGATCGCCGCG GCCGCCGAGATGGCCCTGGCCTCGAACGTCGGCGTCACTCTCACCATCGACGGCGCGCCCCACGCGGCCCTCTTCGGCGA GGACCAGGCCCGCTACCTGATCGGGACGGCCGATCCCGAGGCGATCCTCTCGGCGGCGAAGAAGGCCGGCGTGCCGGCCG CCGTCGTGGGTAGGGCCGGCGGCGAGGCCGTGGCGGTCGAGGGCCTCTTCACCCTGCCCCTCGCCGAGCTGCGCCAGGCC CACGAAGGCTGGATGCCGGCCTATATGGGCGACTAG
Upstream 100 bases:
>100_bases CGGGCGCCGGGCGGGCGCCCTCGCCCCGGACCAACCGGGCGGACCGGCCGGATGTTCCCCCCTATCGCGCTCCCGGCAGA GTCCCGCTAGAAGGCGCCCC
Downstream 100 bases:
>100_bases CCGCCCTCCTCCCCCATCGGGGGAGGGCGCAGCCCGACGATCGGCGCCCGGCAAAAAGGGCGCCGTCGGGTCGGGAGGGC GGCAGCCCGACGATCGGCGC
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II [H]
Number of amino acids: Translated: 731; Mature: 730
Protein sequence:
>731_residues MSAQPAKTMAEKAAEYGLKPEEYDLIVKRLNREPNDVELGVFSVMWSEHCSYKSSRKHLVKFPTKGPRVIQGPGENAGVI DIGDGQACIFKMESHNHPSYIEPYQGAATGVGGIMRDVFTMGARPVALLNALRFGDPAHPKTKRLVSGVVSGIGGYGNCV GVPTVAGETNFHRGYDGNILVNAMCVGLADADKIFYSAAPAPGLPVVYFGSKTGRDGIHGATMASAEFDDASEEKRPTVQ VGDPFAEKLLIEATLELMASGAVAAIQDMGAAGLTSSSVEMAGKGGVGIELDLDAVPQREEGMTAYEMMLSESQERMLAI LKPGREADGHRIFQKWGLDAAVIGRTTDTGHIVLKHQGQVVCDVPLAPLSDDAPLYDRPWVAPEAAPRLDPADVPAPGDW KAAVLKLMSAPDMASKRWIWEQYDRHVMADTLEDSATGADAGIVRVHGTRKALAVTSDCTPRYVQNDPYEGGKQAVAEAW RNVTAVGALPIAITDNLNFGNPERPEIMGQIVRAIEGMAEACRELDFPVVSGNVSLYNETNGVAIPPTPTVGGVGLIEDY AHRADFSNLAAGEALVLVGETQGELGASMYLREMLGREDGAPPPVDLAVERRHGAFVRELIRTDRARTVHDLSDGGLIAA AAEMALASNVGVTLTIDGAPHAALFGEDQARYLIGTADPEAILSAAKKAGVPAAVVGRAGGEAVAVEGLFTLPLAELRQA HEGWMPAYMGD
Sequences:
>Translated_731_residues MSAQPAKTMAEKAAEYGLKPEEYDLIVKRLNREPNDVELGVFSVMWSEHCSYKSSRKHLVKFPTKGPRVIQGPGENAGVI DIGDGQACIFKMESHNHPSYIEPYQGAATGVGGIMRDVFTMGARPVALLNALRFGDPAHPKTKRLVSGVVSGIGGYGNCV GVPTVAGETNFHRGYDGNILVNAMCVGLADADKIFYSAAPAPGLPVVYFGSKTGRDGIHGATMASAEFDDASEEKRPTVQ VGDPFAEKLLIEATLELMASGAVAAIQDMGAAGLTSSSVEMAGKGGVGIELDLDAVPQREEGMTAYEMMLSESQERMLAI LKPGREADGHRIFQKWGLDAAVIGRTTDTGHIVLKHQGQVVCDVPLAPLSDDAPLYDRPWVAPEAAPRLDPADVPAPGDW KAAVLKLMSAPDMASKRWIWEQYDRHVMADTLEDSATGADAGIVRVHGTRKALAVTSDCTPRYVQNDPYEGGKQAVAEAW RNVTAVGALPIAITDNLNFGNPERPEIMGQIVRAIEGMAEACRELDFPVVSGNVSLYNETNGVAIPPTPTVGGVGLIEDY AHRADFSNLAAGEALVLVGETQGELGASMYLREMLGREDGAPPPVDLAVERRHGAFVRELIRTDRARTVHDLSDGGLIAA AAEMALASNVGVTLTIDGAPHAALFGEDQARYLIGTADPEAILSAAKKAGVPAAVVGRAGGEAVAVEGLFTLPLAELRQA HEGWMPAYMGD >Mature_730_residues SAQPAKTMAEKAAEYGLKPEEYDLIVKRLNREPNDVELGVFSVMWSEHCSYKSSRKHLVKFPTKGPRVIQGPGENAGVID IGDGQACIFKMESHNHPSYIEPYQGAATGVGGIMRDVFTMGARPVALLNALRFGDPAHPKTKRLVSGVVSGIGGYGNCVG VPTVAGETNFHRGYDGNILVNAMCVGLADADKIFYSAAPAPGLPVVYFGSKTGRDGIHGATMASAEFDDASEEKRPTVQV GDPFAEKLLIEATLELMASGAVAAIQDMGAAGLTSSSVEMAGKGGVGIELDLDAVPQREEGMTAYEMMLSESQERMLAIL KPGREADGHRIFQKWGLDAAVIGRTTDTGHIVLKHQGQVVCDVPLAPLSDDAPLYDRPWVAPEAAPRLDPADVPAPGDWK AAVLKLMSAPDMASKRWIWEQYDRHVMADTLEDSATGADAGIVRVHGTRKALAVTSDCTPRYVQNDPYEGGKQAVAEAWR NVTAVGALPIAITDNLNFGNPERPEIMGQIVRAIEGMAEACRELDFPVVSGNVSLYNETNGVAIPPTPTVGGVGLIEDYA HRADFSNLAAGEALVLVGETQGELGASMYLREMLGREDGAPPPVDLAVERRHGAFVRELIRTDRARTVHDLSDGGLIAAA AEMALASNVGVTLTIDGAPHAALFGEDQARYLIGTADPEAILSAAKKAGVPAAVVGRAGGEAVAVEGLFTLPLAELRQAH EGWMPAYMGD
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family [H]
Homologues:
Organism=Escherichia coli, GI48994899, Length=800, Percent_Identity=25.75, Blast_Score=119, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17553022, Length=544, Percent_Identity=22.2426470588235, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 77460; Mature: 77328
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQPAKTMAEKAAEYGLKPEEYDLIVKRLNREPNDVELGVFSVMWSEHCSYKSSRKHLV CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCCEE KFPTKGPRVIQGPGENAGVIDIGDGQACIFKMESHNHPSYIEPYQGAATGVGGIMRDVFT ECCCCCCEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH MGARPVALLNALRFGDPAHPKTKRLVSGVVSGIGGYGNCVGVPTVAGETNFHRGYDGNIL CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCEECCCCCCCCCCCCCEE VNAMCVGLADADKIFYSAAPAPGLPVVYFGSKTGRDGIHGATMASAEFDDASEEKRPTVQ EEEEEECCCCHHHHEEECCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCHHCCCEEE VGDPFAEKLLIEATLELMASGAVAAIQDMGAAGLTSSSVEMAGKGGVGIELDLDAVPQRE ECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHCCCCCCCEEEEECCCCCCCC EGMTAYEMMLSESQERMLAILKPGREADGHRIFQKWGLDAAVIGRTTDTGHIVLKHQGQV CCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEECCCE VCDVPLAPLSDDAPLYDRPWVAPEAAPRLDPADVPAPGDWKAAVLKLMSAPDMASKRWIW EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH EQYDRHVMADTLEDSATGADAGIVRVHGTRKALAVTSDCTPRYVQNDPYEGGKQAVAEAW HHHCCHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHH RNVTAVGALPIAITDNLNFGNPERPEIMGQIVRAIEGMAEACRELDFPVVSGNVSLYNET HCEEEECEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECC NGVAIPPTPTVGGVGLIEDYAHRADFSNLAAGEALVLVGETQGELGASMYLREMLGREDG CCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCC APPPVDLAVERRHGAFVRELIRTDRARTVHDLSDGGLIAAAAEMALASNVGVTLTIDGAP CCCCCCEEEECCCCHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCC HAALFGEDQARYLIGTADPEAILSAAKKAGVPAAVVGRAGGEAVAVEGLFTLPLAELRQA CEEEECCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCEEEECCCHHCCHHHHHHH HEGWMPAYMGD HCCCCCCCCCC >Mature Secondary Structure SAQPAKTMAEKAAEYGLKPEEYDLIVKRLNREPNDVELGVFSVMWSEHCSYKSSRKHLV CCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCCEE KFPTKGPRVIQGPGENAGVIDIGDGQACIFKMESHNHPSYIEPYQGAATGVGGIMRDVFT ECCCCCCEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH MGARPVALLNALRFGDPAHPKTKRLVSGVVSGIGGYGNCVGVPTVAGETNFHRGYDGNIL CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCEECCCCCCCCCCCCCEE VNAMCVGLADADKIFYSAAPAPGLPVVYFGSKTGRDGIHGATMASAEFDDASEEKRPTVQ EEEEEECCCCHHHHEEECCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCHHCCCEEE VGDPFAEKLLIEATLELMASGAVAAIQDMGAAGLTSSSVEMAGKGGVGIELDLDAVPQRE ECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHCCCCCCCEEEEECCCCCCCC EGMTAYEMMLSESQERMLAILKPGREADGHRIFQKWGLDAAVIGRTTDTGHIVLKHQGQV CCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEECCCE VCDVPLAPLSDDAPLYDRPWVAPEAAPRLDPADVPAPGDWKAAVLKLMSAPDMASKRWIW EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH EQYDRHVMADTLEDSATGADAGIVRVHGTRKALAVTSDCTPRYVQNDPYEGGKQAVAEAW HHHCCHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHH RNVTAVGALPIAITDNLNFGNPERPEIMGQIVRAIEGMAEACRELDFPVVSGNVSLYNET HCEEEECEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECC NGVAIPPTPTVGGVGLIEDYAHRADFSNLAAGEALVLVGETQGELGASMYLREMLGREDG CCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCC APPPVDLAVERRHGAFVRELIRTDRARTVHDLSDGGLIAAAAEMALASNVGVTLTIDGAP CCCCCCEEEECCCCHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCC HAALFGEDQARYLIGTADPEAILSAAKKAGVPAAVVGRAGGEAVAVEGLFTLPLAELRQA CEEEECCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCEEEECCCHHCCHHHHHHH HEGWMPAYMGD HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]