Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197104471

Identifier: 197104471

GI number: 197104471

Start: 1114409

End: 1114798

Strand: Reverse

Name: 197104471

Synonym: PHZ_c1005

Alternate gene names: NA

Gene position: 1114798-1114409 (Counterclockwise)

Preceding gene: 197104475

Following gene: 197104470

Centisome position: 27.9

GC content: 66.67

Gene sequence:

>390_bases
ATGGCCACGCACACGACACCACGGCATCGCGGCGTCGTCATGACCGGCGAGAACGGCGACGAGGGTCGGAAGGCCTTCTA
CATCCTGATCGAGGCTCGGCCGGGCCGCGAAGACGAGGTTCTGCAGATGCTTCGGGATATCCGAGCCTGCGTCGAGCACG
AGCCCGCCACGGGGCCGTGGTACGCGGTGCGCCATTCACCCACGACCTTCGCCATTTTCGAGACGTTCCCCGACATCGCC
GGGCGCGATGCGCATGTGGCCGGCGGGGGTGGCGACATCTTCCGCGAAGTCGCGCGAATGAACCACCTCCTCATCCGCCC
GGCGCATGTGCAGAAGGTGGACGTCCTTCTGTCCAAGCAGGTGTTCACCTGGCCGCCCGGCGTCTCCTAG

Upstream 100 bases:

>100_bases
GTCGGAGTTTTAGGCAAGGTTCTCGACGCATCGGGCAACCCGCCCTCGCCCGAAGAGGGGATACGACGGCGGAAACGCCC
GCCGCGCAGAGGGACCGCCC

Downstream 100 bases:

>100_bases
GCGCCAGCTGCCGACTCCCCGACCACCCACTGCAGTGGATGGGTCCAGCCCGGCCCGGCCGAGACCGGACGCCCTCGCCC
CCCTCCTCCCCGCCGGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MATHTTPRHRGVVMTGENGDEGRKAFYILIEARPGREDEVLQMLRDIRACVEHEPATGPWYAVRHSPTTFAIFETFPDIA
GRDAHVAGGGGDIFREVARMNHLLIRPAHVQKVDVLLSKQVFTWPPGVS

Sequences:

>Translated_129_residues
MATHTTPRHRGVVMTGENGDEGRKAFYILIEARPGREDEVLQMLRDIRACVEHEPATGPWYAVRHSPTTFAIFETFPDIA
GRDAHVAGGGGDIFREVARMNHLLIRPAHVQKVDVLLSKQVFTWPPGVS
>Mature_128_residues
ATHTTPRHRGVVMTGENGDEGRKAFYILIEARPGREDEVLQMLRDIRACVEHEPATGPWYAVRHSPTTFAIFETFPDIAG
RDAHVAGGGGDIFREVARMNHLLIRPAHVQKVDVLLSKQVFTWPPGVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14384; Mature: 14252

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATHTTPRHRGVVMTGENGDEGRKAFYILIEARPGREDEVLQMLRDIRACVEHEPATGPW
CCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCE
YAVRHSPTTFAIFETFPDIAGRDAHVAGGGGDIFREVARMNHLLIRPAHVQKVDVLLSKQ
EEEECCCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHEEECCCHHHHHHHHHHCC
VFTWPPGVS
EECCCCCCC
>Mature Secondary Structure 
ATHTTPRHRGVVMTGENGDEGRKAFYILIEARPGREDEVLQMLRDIRACVEHEPATGPW
CCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCE
YAVRHSPTTFAIFETFPDIAGRDAHVAGGGGDIFREVARMNHLLIRPAHVQKVDVLLSKQ
EEEECCCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHEEECCCHHHHHHHHHHCC
VFTWPPGVS
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA