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The map label for this gene is flaD [H]

Identifier: 197104380

GI number: 197104380

Start: 1007750

End: 1008508

Strand: Reverse

Name: flaD [H]

Synonym: PHZ_c0914

Alternate gene names: 197104380

Gene position: 1008508-1007750 (Counterclockwise)

Preceding gene: 197104381

Following gene: 197104379

Centisome position: 25.24

GC content: 76.55

Gene sequence:

>759_bases
ATGCGGACCCTGATCGCCGCCCCCGCCGCCTTGGCACTCGCCGCCTTCGCGCTCGCCGGCCCCGCCCTCGCGGGCCAGCC
GGTCACGTTGAAGGCCGAGGTGACCGACGCCGACGGGATCGTCACGCTGGGCGACCTGTTCGACGGGGCGGGCGCGGCGG
CCAAGACCCCCGTGGCGGTCCGGGCCGGCACGCACGTGATGCTGAACGCCTTGGCGGTCCAGGGCGTCGCCCGGCGCGCC
GGGCTGGACTGGGCCAACGCCCAGGGCCTGCGCCAGATCGTCGTGCGCGGCGGCCAGCCGGCCGCCTCCGCGCCAGCCCC
GGCCGCGCGCGGCAACGTCGAGGTGCTCACCTGGGCGCGCAGCATCGCGGCGGGCGAGGTGATCCAGCCCGCCGACCTCG
TCTGGGGCAAGGCGGCCGCCGCGCCGGCCGACGCCCCCAGCGATCCCGACGCCGTCATCGGCATGGCCGCCCGCCGGCCC
CTGCGCGAAGGCGCCGCCGTCGCCGGCCGGGACATCGCCGCCCTGGAGGTCGTGAAGGCCGGAGAGATCGTCACCCTGAC
CTTCGACGCCGACGGCATCTCCCTGTCCCTGCAGGCCAAGGCGCTGAGCGGCGGGGCGGCCGGCGAGACCATCAACGTCC
AGAACCCCTCGTCGAAGAAGATCGTCCAGGCGGTGGTGACCGGTCCCGGCCAGGCGGCCGTGGGCCCCGCCGCCGGCCAC
ATGAAGCTGAACCGCACCACCCGCGTCGCGCTCCGTTGA

Upstream 100 bases:

>100_bases
CGCCCTGATCGTCGCCCAGCGGGCCTACGAGATGAACTCCAAGGTCATCTCGACCGCCGACAACATGCTGGCCACCGCCA
ACCAGGTGAAGGCCTAAGCG

Downstream 100 bases:

>100_bases
AGGAAGCCCCCATGCGTATCCGTCTGACCGCCATCGCCGCCCCCCTGCTGCTGGGCGCCTCCCTCGCCGCCTGCTCGACC
GTGACCGAGGCCGTGCGCGG

Product: distal basal-body ring component protein FlaD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MRTLIAAPAALALAAFALAGPALAGQPVTLKAEVTDADGIVTLGDLFDGAGAAAKTPVAVRAGTHVMLNALAVQGVARRA
GLDWANAQGLRQIVVRGGQPAASAPAPAARGNVEVLTWARSIAAGEVIQPADLVWGKAAAAPADAPSDPDAVIGMAARRP
LREGAAVAGRDIAALEVVKAGEIVTLTFDADGISLSLQAKALSGGAAGETINVQNPSSKKIVQAVVTGPGQAAVGPAAGH
MKLNRTTRVALR

Sequences:

>Translated_252_residues
MRTLIAAPAALALAAFALAGPALAGQPVTLKAEVTDADGIVTLGDLFDGAGAAAKTPVAVRAGTHVMLNALAVQGVARRA
GLDWANAQGLRQIVVRGGQPAASAPAPAARGNVEVLTWARSIAAGEVIQPADLVWGKAAAAPADAPSDPDAVIGMAARRP
LREGAAVAGRDIAALEVVKAGEIVTLTFDADGISLSLQAKALSGGAAGETINVQNPSSKKIVQAVVTGPGQAAVGPAAGH
MKLNRTTRVALR
>Mature_252_residues
MRTLIAAPAALALAAFALAGPALAGQPVTLKAEVTDADGIVTLGDLFDGAGAAAKTPVAVRAGTHVMLNALAVQGVARRA
GLDWANAQGLRQIVVRGGQPAASAPAPAARGNVEVLTWARSIAAGEVIQPADLVWGKAAAAPADAPSDPDAVIGMAARRP
LREGAAVAGRDIAALEVVKAGEIVTLTFDADGISLSLQAKALSGGAAGETINVQNPSSKKIVQAVVTGPGQAAVGPAAGH
MKLNRTTRVALR

Specific function: FlaD might be the structural protein of the distal basal body ring P, or it is necessary for the assembly of the P ring [H]

COG id: COG1261

COG function: function code NO; Flagellar basal body P-ring biosynthesis protein

Gene ontology:

Cell location: Periplasm (Probable). Bacterial flagellum basal body (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017585
- InterPro:   IPR013974 [H]

Pfam domain/function: PF08666 SAF [H]

EC number: NA

Molecular weight: Translated: 24993; Mature: 24993

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLIAAPAALALAAFALAGPALAGQPVTLKAEVTDADGIVTLGDLFDGAGAAAKTPVAV
CCCEECCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEE
RAGTHVMLNALAVQGVARRAGLDWANAQGLRQIVVRGGQPAASAPAPAARGNVEVLTWAR
ECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEH
SIAAGEVIQPADLVWGKAAAAPADAPSDPDAVIGMAARRPLREGAAVAGRDIAALEVVKA
HHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCCCCCEEEEEEEEC
GEIVTLTFDADGISLSLQAKALSGGAAGETINVQNPSSKKIVQAVVTGPGQAAVGPAAGH
CCEEEEEECCCCEEEEEEEEEECCCCCCCEEECCCCCHHHHEEEEECCCCCCCCCCCCCC
MKLNRTTRVALR
EEECCEEEEEEC
>Mature Secondary Structure
MRTLIAAPAALALAAFALAGPALAGQPVTLKAEVTDADGIVTLGDLFDGAGAAAKTPVAV
CCCEECCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEE
RAGTHVMLNALAVQGVARRAGLDWANAQGLRQIVVRGGQPAASAPAPAARGNVEVLTWAR
ECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEH
SIAAGEVIQPADLVWGKAAAAPADAPSDPDAVIGMAARRPLREGAAVAGRDIAALEVVKA
HHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCCCCCEEEEEEEEC
GEIVTLTFDADGISLSLQAKALSGGAAGETINVQNPSSKKIVQAVVTGPGQAAVGPAAGH
CCEEEEEECCCCEEEEEEEEEECCCCCCCEEECCCCCHHHHEEEEECCCCCCCCCCCCCC
MKLNRTTRVALR
EEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2842303; 11259647; 1474584 [H]