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The map label for this gene is yibH [C]

Identifier: 197104348

GI number: 197104348

Start: 976047

End: 977015

Strand: Reverse

Name: yibH [C]

Synonym: PHZ_c0882

Alternate gene names: 197104348

Gene position: 977015-976047 (Counterclockwise)

Preceding gene: 197104349

Following gene: 197104347

Centisome position: 24.45

GC content: 73.27

Gene sequence:

>969_bases
ATGCCCGCCATCTTCCGCAACCGTTTCGTCTGGATCGCCGTCCTCGTCCTCGCGCTGGGCGGCGGCGGCTTCATGTTCAT
GTCCAGCCAGGCCAAGGCGACGAAGGCCGCCGAGGCCAAGGCCGCGGCCGAGGTCAAGCCCAGCCCCTTCTCGGCGGTCG
CCAACGGCAAGGCCGACGTCGAGGGCGGGATCATCCAGGTCGCCGCCCGCCGGGCCGGCGTGGTCCGCGACGTGCTCGTC
CAGGAAGGCGAGGACGTGACGAAGGGCCAGATCCTCGCGCGCCTCGAGGACGACGAGCCTCGGCTGCAGGCCGCGCGCGC
CGCGGCCGAGGTCCGCCAGGCTCGGGCGGCCCTCGCCCTGCTCGAGGTGCAGCTCTCGGCGGCCCAGCGCGAGGAGCGCC
GCCTCCAGGGCCTCGCCCCCTCGAACTTCGTCGCCGCCCAGAAGCTGGACCAGGCGCGCGACGGCGTGCGCGAGGCCCAG
GCCAAGATCCTCGCCCAGCAGGCGGTCGTCGCCACCGCCGAGGCGCGGCTGGCCGAGGCCCGCTACGACCAGGAGCTCAG
CATCATCCGCGCGCCCGTCGAGGGCCGGATCGTGCGCCGCTACGCCAACCCCGGCGCGGGCGCCTCGACCCTGAACGTCT
CCAACATGTTCGACCTGGAGCCGCGCGCCGGCCGCATCGTGCGCGCCGAGATCGCCGAGGGCGCCCTGCCCTACGTCTCG
GTTGGCCAGACCGTGCAGATGTCGCCCGAGAGCGACCCGACCAAGACCTTCAACGGCAAGGTCCTGCGCCGGGCGGCTGT
GTTCGGCGCGCGCAAGCTGCAGTCGGACGATCCCAACGAGCGCACCGACGACCGCGTGGTCGAGGTGGTGGTCGACAGCT
CCGGCGCGCCGTTCCTGATCGGGCAGCGCGTCCTCGTGAAGTTCATGCGCCAGCAGCAGGCGCAGGTCCCGACCGCGCCG
CAGGGCTAA

Upstream 100 bases:

>100_bases
GGAGGACGGACAGATCCTGGAGGACCGCCGCGCCGCAGAGCCGGCCCAGTCCGCCGCCGACCGTCGTCCCGAACCCGCGC
TCCTGGGAGCCTGAGGAACC

Downstream 100 bases:

>100_bases
GGGCTTCCCCAAGCGCCCTCACCCCCCTGCCGCGGCCGCCTCCCCCGCCTCCTGGTTGGCGGGGGAGGCGCTCCTTTCCC
GAAAGCGCCGCGCCTCCGCC

Product: HlyD family secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MPAIFRNRFVWIAVLVLALGGGGFMFMSSQAKATKAAEAKAAAEVKPSPFSAVANGKADVEGGIIQVAARRAGVVRDVLV
QEGEDVTKGQILARLEDDEPRLQAARAAAEVRQARAALALLEVQLSAAQREERRLQGLAPSNFVAAQKLDQARDGVREAQ
AKILAQQAVVATAEARLAEARYDQELSIIRAPVEGRIVRRYANPGAGASTLNVSNMFDLEPRAGRIVRAEIAEGALPYVS
VGQTVQMSPESDPTKTFNGKVLRRAAVFGARKLQSDDPNERTDDRVVEVVVDSSGAPFLIGQRVLVKFMRQQQAQVPTAP
QG

Sequences:

>Translated_322_residues
MPAIFRNRFVWIAVLVLALGGGGFMFMSSQAKATKAAEAKAAAEVKPSPFSAVANGKADVEGGIIQVAARRAGVVRDVLV
QEGEDVTKGQILARLEDDEPRLQAARAAAEVRQARAALALLEVQLSAAQREERRLQGLAPSNFVAAQKLDQARDGVREAQ
AKILAQQAVVATAEARLAEARYDQELSIIRAPVEGRIVRRYANPGAGASTLNVSNMFDLEPRAGRIVRAEIAEGALPYVS
VGQTVQMSPESDPTKTFNGKVLRRAAVFGARKLQSDDPNERTDDRVVEVVVDSSGAPFLIGQRVLVKFMRQQQAQVPTAP
QG
>Mature_321_residues
PAIFRNRFVWIAVLVLALGGGGFMFMSSQAKATKAAEAKAAAEVKPSPFSAVANGKADVEGGIIQVAARRAGVVRDVLVQ
EGEDVTKGQILARLEDDEPRLQAARAAAEVRQARAALALLEVQLSAAQREERRLQGLAPSNFVAAQKLDQARDGVREAQA
KILAQQAVVATAEARLAEARYDQELSIIRAPVEGRIVRRYANPGAGASTLNVSNMFDLEPRAGRIVRAEIAEGALPYVSV
GQTVQMSPESDPTKTFNGKVLRRAAVFGARKLQSDDPNERTDDRVVEVVVDSSGAPFLIGQRVLVKFMRQQQAQVPTAPQ
G

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 34544; Mature: 34413

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAIFRNRFVWIAVLVLALGGGGFMFMSSQAKATKAAEAKAAAEVKPSPFSAVANGKADV
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
EGGIIQVAARRAGVVRDVLVQEGEDVTKGQILARLEDDEPRLQAARAAAEVRQARAALAL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
LEVQLSAAQREERRLQGLAPSNFVAAQKLDQARDGVREAQAKILAQQAVVATAEARLAEA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYDQELSIIRAPVEGRIVRRYANPGAGASTLNVSNMFDLEPRAGRIVRAEIAEGALPYVS
HCCCCHHEEECCCCCHHHHEECCCCCCCCEEECCCEECCCCCCCCEEEEHHHCCCCCEEE
VGQTVQMSPESDPTKTFNGKVLRRAAVFGARKLQSDDPNERTDDRVVEVVVDSSGAPFLI
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEH
GQRVLVKFMRQQQAQVPTAPQG
HHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PAIFRNRFVWIAVLVLALGGGGFMFMSSQAKATKAAEAKAAAEVKPSPFSAVANGKADV
CCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
EGGIIQVAARRAGVVRDVLVQEGEDVTKGQILARLEDDEPRLQAARAAAEVRQARAALAL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
LEVQLSAAQREERRLQGLAPSNFVAAQKLDQARDGVREAQAKILAQQAVVATAEARLAEA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYDQELSIIRAPVEGRIVRRYANPGAGASTLNVSNMFDLEPRAGRIVRAEIAEGALPYVS
HCCCCHHEEECCCCCHHHHEECCCCCCCCEEECCCEECCCCCCCCEEEEHHHCCCCCEEE
VGQTVQMSPESDPTKTFNGKVLRRAAVFGARKLQSDDPNERTDDRVVEVVVDSSGAPFLI
CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEH
GQRVLVKFMRQQQAQVPTAPQG
HHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA