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The map label for this gene is fliN [H]

Identifier: 197104325

GI number: 197104325

Start: 952135

End: 952470

Strand: Reverse

Name: fliN [H]

Synonym: PHZ_c0859

Alternate gene names: 197104325

Gene position: 952470-952135 (Counterclockwise)

Preceding gene: 197104326

Following gene: 197104324

Centisome position: 23.83

GC content: 69.05

Gene sequence:

>336_bases
ATGGCGGACGACGACCTGAAGCTGGACGAATTCGGACCCGAGGACGGCGCCCTGCCCGAGCCCTCGCCAGACGAGGACAA
GACCGCGGGCGACCTCGCCCCGGTGTTCGACGTGCCGGTGAGCATCTCGGCGGTGCTGGGGCGCTCGACGCTCTCGGTCG
CCCAGCTGCTGCAGCTGGCGCAGGGCAGCGTGCTGGAGCTCGACCGCAAGGTCGGCGAGGCGATCGACATCTATGTGAAC
AACCGCCTGGTGGCCCGCGGCGAGGTCGTCATCGTCGACGAGCGCCTGGGCGTGACCATGACGGAAATCATCAAGGACGG
TGACGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
CCGCCGCGGCCGAACGCGTGACCCAGGCGCTGGAGGCCGCGCTCGCCGCGGAAGGCCTCCACGCCGAACCCCTCATCCCC
GGCAGCGAAAGCTAAAGCCC

Downstream 100 bases:

>100_bases
GGCCGGGGCGGGGTGAAGGAGATTGCCGATGCGGCTTCTGGTCGTCGGAAAACTGAGCGGACAGCTCTCCGCCGCCGTGA
AGATGGCGATGAGCGCGGGC

Product: flagellar motor switch protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MADDDLKLDEFGPEDGALPEPSPDEDKTAGDLAPVFDVPVSISAVLGRSTLSVAQLLQLAQGSVLELDRKVGEAIDIYVN
NRLVARGEVVIVDERLGVTMTEIIKDGDAAA

Sequences:

>Translated_111_residues
MADDDLKLDEFGPEDGALPEPSPDEDKTAGDLAPVFDVPVSISAVLGRSTLSVAQLLQLAQGSVLELDRKVGEAIDIYVN
NRLVARGEVVIVDERLGVTMTEIIKDGDAAA
>Mature_110_residues
ADDDLKLDEFGPEDGALPEPSPDEDKTAGDLAPVFDVPVSISAVLGRSTLSVAQLLQLAQGSVLELDRKVGEAIDIYVNN
RLVARGEVVIVDERLGVTMTEIIKDGDAAA

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=81, Percent_Identity=43.2098765432099, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 11732; Mature: 11601

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDDLKLDEFGPEDGALPEPSPDEDKTAGDLAPVFDVPVSISAVLGRSTLSVAQLLQLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHH
QGSVLELDRKVGEAIDIYVNNRLVARGEVVIVDERLGVTMTEIIKDGDAAA
CCCHHHHHHHCCCEEEEEECCEEECCCCEEEEECCCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
ADDDLKLDEFGPEDGALPEPSPDEDKTAGDLAPVFDVPVSISAVLGRSTLSVAQLLQLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHH
QGSVLELDRKVGEAIDIYVNNRLVARGEVVIVDERLGVTMTEIIKDGDAAA
CCCHHHHHHHCCCEEEEEECCEEECCCCEEEEECCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8002583; 11259647; 2315326; 1732219 [H]