| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ycbX [C]
Identifier: 197104294
GI number: 197104294
Start: 913893
End: 914693
Strand: Reverse
Name: ycbX [C]
Synonym: PHZ_c0828
Alternate gene names: 197104294
Gene position: 914693-913893 (Counterclockwise)
Preceding gene: 197104297
Following gene: 197104293
Centisome position: 22.89
GC content: 72.16
Gene sequence:
>801_bases ATGAACGGCCACGTCGCGGCGATCTACCGCCATCCCGTGAAGGGCTTCACGCCCGAACCCCTGGACCGGGTGCGGCTCGC CCCCGGCGAGGGCTTCCCGCACGACCGCATCTTCGCGGTCGAGAACGGCCCGTCGGGCCACGACCCGGCCGCGCCCGCCT TCCTGCCGAAGACCAAGTTCACGGTGCTGATGAACATCCCCAGGGTCGCCGCGGCGCGGACGCGCTACGACGCGGCGAGC GGGGTGATGACAGCCGAGGCCCCGGGCGCGCCGGACTTCGCCGGCTCGCTGCACGAACCAGCCGGGCGCGAGGCGTTCGC CGCCTGGCTGACGGCCCTGCTGGGCGAGGACGCGAGGGGCCCGCTGAAGGTGGTGGAGTCCGGAGCGGGCTTCCGCTTCA CCGACCATCCCAAGGGCCAGGTCTCGGTGATCAACCTCGCCAGCGTGCGCGACCTGTCGCGCCGGATGGGCGTCGAGCTG GACCCGTCGCGCTTCCGCGCCAACGTCTATGTCGACGGCTGGCCGGCCTGGGTGGAGAACGACTGGACCGGCGGGCCGCT GATGCTGGGCTGGGCCCGCGCCACCGTCTTCAAGCCGATCGTCCGCTGCGCCGCCACGCACGTGGACCCGGCGACGGGCG AGCGGGACCTCGACGTCGTCAAGGCGCTGTTCGACAACTACGGGCACATGAACTGCGGAATCTATCTGAACGTCACGGCC GAGGGGGTCGTGAGCCTGGGCGATGCGGTGGCGGGCCCCGCCATCGAGGACGAACCCGCGAGGGCGCCGGAATGGGCCTG A
Upstream 100 bases:
>100_bases GCCCTCCGACGGCGGCGCTTGGCCAAACCCGGCGACGCCTCGTCGCGTTCCCATCGAGCCGGGTTGTGGCTGCGGCCGGC ATCGGCCACAAGCGGCGACC
Downstream 100 bases:
>100_bases ACCTCGTCCAGGCGTGGAGCCAGGCCAAGCAGCGCCTGGAGGCCGCCGGCCTCGCTGGCCCGGTGATCGACGCGCGCCTG CTGGTGGAAGCGGCCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: MOSC Domain Containing Protein; Mosc Domain Protein; MOSC Domain Protein; Mosc Domain Containing Protein; Transcriptional Regulator; Mosc Domain; Xylene Monooxygenase Electron Transfer Component
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MNGHVAAIYRHPVKGFTPEPLDRVRLAPGEGFPHDRIFAVENGPSGHDPAAPAFLPKTKFTVLMNIPRVAAARTRYDAAS GVMTAEAPGAPDFAGSLHEPAGREAFAAWLTALLGEDARGPLKVVESGAGFRFTDHPKGQVSVINLASVRDLSRRMGVEL DPSRFRANVYVDGWPAWVENDWTGGPLMLGWARATVFKPIVRCAATHVDPATGERDLDVVKALFDNYGHMNCGIYLNVTA EGVVSLGDAVAGPAIEDEPARAPEWA
Sequences:
>Translated_266_residues MNGHVAAIYRHPVKGFTPEPLDRVRLAPGEGFPHDRIFAVENGPSGHDPAAPAFLPKTKFTVLMNIPRVAAARTRYDAAS GVMTAEAPGAPDFAGSLHEPAGREAFAAWLTALLGEDARGPLKVVESGAGFRFTDHPKGQVSVINLASVRDLSRRMGVEL DPSRFRANVYVDGWPAWVENDWTGGPLMLGWARATVFKPIVRCAATHVDPATGERDLDVVKALFDNYGHMNCGIYLNVTA EGVVSLGDAVAGPAIEDEPARAPEWA >Mature_266_residues MNGHVAAIYRHPVKGFTPEPLDRVRLAPGEGFPHDRIFAVENGPSGHDPAAPAFLPKTKFTVLMNIPRVAAARTRYDAAS GVMTAEAPGAPDFAGSLHEPAGREAFAAWLTALLGEDARGPLKVVESGAGFRFTDHPKGQVSVINLASVRDLSRRMGVEL DPSRFRANVYVDGWPAWVENDWTGGPLMLGWARATVFKPIVRCAATHVDPATGERDLDVVKALFDNYGHMNCGIYLNVTA EGVVSLGDAVAGPAIEDEPARAPEWA
Specific function: Unknown
COG id: COG3217
COG function: function code R; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28514; Mature: 28514
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGHVAAIYRHPVKGFTPEPLDRVRLAPGEGFPHDRIFAVENGPSGHDPAAPAFLPKTKF CCCCEEEEEECCCCCCCCCCHHHEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCE TVLMNIPRVAAARTRYDAASGVMTAEAPGAPDFAGSLHEPAGREAFAAWLTALLGEDARG EEEEECCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC PLKVVESGAGFRFTDHPKGQVSVINLASVRDLSRRMGVELDPSRFRANVYVDGWPAWVEN CHHHHCCCCCCEECCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHEEEEEEECCCCCCCCC DWTGGPLMLGWARATVFKPIVRCAATHVDPATGERDLDVVKALFDNYGHMNCGIYLNVTA CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEECCEEEEEEC EGVVSLGDAVAGPAIEDEPARAPEWA CCHHHHCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNGHVAAIYRHPVKGFTPEPLDRVRLAPGEGFPHDRIFAVENGPSGHDPAAPAFLPKTKF CCCCEEEEEECCCCCCCCCCHHHEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCE TVLMNIPRVAAARTRYDAASGVMTAEAPGAPDFAGSLHEPAGREAFAAWLTALLGEDARG EEEEECCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC PLKVVESGAGFRFTDHPKGQVSVINLASVRDLSRRMGVELDPSRFRANVYVDGWPAWVEN CHHHHCCCCCCEECCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHEEEEEEECCCCCCCCC DWTGGPLMLGWARATVFKPIVRCAATHVDPATGERDLDVVKALFDNYGHMNCGIYLNVTA CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEECCEEEEEEC EGVVSLGDAVAGPAIEDEPARAPEWA CCHHHHCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA