| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is hemK [H]
Identifier: 197104293
GI number: 197104293
Start: 913039
End: 913902
Strand: Reverse
Name: hemK [H]
Synonym: PHZ_c0827
Alternate gene names: 197104293
Gene position: 913902-913039 (Counterclockwise)
Preceding gene: 197104294
Following gene: 197104292
Centisome position: 22.87
GC content: 73.15
Gene sequence:
>864_bases ATGGGCCTGAACCTCGTCCAGGCGTGGAGCCAGGCCAAGCAGCGCCTGGAGGCCGCCGGCCTCGCTGGCCCGGTGATCGA CGCGCGCCTGCTGGTGGAAGCGGCCGCCGACGCCACCCGCGCCGACATCGTCACCGATCCCTACCGGCCGCTGACCCCCG AGCAGGAGGCGAGACTGCAGGACTATCTGGCGCGGCGGGAGAAGCGCGAGCCGGTCAGCCACATCCTGGGCCGCAAGGGC TTCTGGAAGATCATGCTGCGGGTGACGCCCGACGTGCTGACCCCGCGCCCAGACACCGAGACCGTCGTGGACGTGGCGCT GAAGGCCTTCCCCGAGCACGCTCCGTGGTCGGTGCTGGACCTGGGTGTCGGCTCGGGCGCCATCCTGCTGGCGATCCTGG CCGAGCGGCCGGCGGCCAAGGGCCTGGGGATCGACGCCTCGGAGGAAGCCCTGGCGGTGGCGCGCGACAACGCCGCGGCC CTGGGCCTGGCCGGGCGGACGGCCCTGCTGCGCGGCGACTGGACGGCGGGCCTGGGGGACAGCGCCTTCGACCTGGTGGT CTCGAACCCGCCCTACATCGCCAGCGACGTGCTGGAGACCCTCGAGCCCGAGGTGAAGGACTACGAGCCGCGGCTGGCCC TGGAAGGCGGCGCCGACGGGCTGGACGCCTACCGCATCCTGGCCCCCGAGATCGTGCGCGTGCTGAAGCCCGGCGGGCGC TTCGCGGTGGAGATCGGCTACGACCAGAAGGACGCCGTCGAGGCGCTGTTCCGCGCCGCGGGGGCCGAGGACGTGCGCAC GATCCGCGACCTGGCCGACCGCGACCGGGTCGTCGCGGGTGCGAAGAAACCCCTTGGAAACTAG
Upstream 100 bases:
>100_bases ACTGCGGAATCTATCTGAACGTCACGGCCGAGGGGGTCGTGAGCCTGGGCGATGCGGTGGCGGGCCCCGCCATCGAGGAC GAACCCGCGAGGGCGCCGGA
Downstream 100 bases:
>100_bases CACCTGACTCGCTACATCGTTGGATGTCTCCACCCAAATCGCCGGTGTTAAGGCAGACGCGTCCCGATGAAGGACGCCCG CCAGCCCCGGCAGGCGCGAC
Product: modification methylase HemK
Products: NA
Alternate protein names: M.MloHemKP [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MGLNLVQAWSQAKQRLEAAGLAGPVIDARLLVEAAADATRADIVTDPYRPLTPEQEARLQDYLARREKREPVSHILGRKG FWKIMLRVTPDVLTPRPDTETVVDVALKAFPEHAPWSVLDLGVGSGAILLAILAERPAAKGLGIDASEEALAVARDNAAA LGLAGRTALLRGDWTAGLGDSAFDLVVSNPPYIASDVLETLEPEVKDYEPRLALEGGADGLDAYRILAPEIVRVLKPGGR FAVEIGYDQKDAVEALFRAAGAEDVRTIRDLADRDRVVAGAKKPLGN
Sequences:
>Translated_287_residues MGLNLVQAWSQAKQRLEAAGLAGPVIDARLLVEAAADATRADIVTDPYRPLTPEQEARLQDYLARREKREPVSHILGRKG FWKIMLRVTPDVLTPRPDTETVVDVALKAFPEHAPWSVLDLGVGSGAILLAILAERPAAKGLGIDASEEALAVARDNAAA LGLAGRTALLRGDWTAGLGDSAFDLVVSNPPYIASDVLETLEPEVKDYEPRLALEGGADGLDAYRILAPEIVRVLKPGGR FAVEIGYDQKDAVEALFRAAGAEDVRTIRDLADRDRVVAGAKKPLGN >Mature_286_residues GLNLVQAWSQAKQRLEAAGLAGPVIDARLLVEAAADATRADIVTDPYRPLTPEQEARLQDYLARREKREPVSHILGRKGF WKIMLRVTPDVLTPRPDTETVVDVALKAFPEHAPWSVLDLGVGSGAILLAILAERPAAKGLGIDASEEALAVARDNAAAL GLAGRTALLRGDWTAGLGDSAFDLVVSNPPYIASDVLETLEPEVKDYEPRLALEGGADGLDAYRILAPEIVRVLKPGGRF AVEIGYDQKDAVEALFRAAGAEDVRTIRDLADRDRVVAGAKKPLGN
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=293, Percent_Identity=29.6928327645051, Blast_Score=112, Evalue=5e-25, Organism=Escherichia coli, GI1787463, Length=275, Percent_Identity=36, Blast_Score=154, Evalue=8e-39, Organism=Escherichia coli, GI87082085, Length=197, Percent_Identity=29.9492385786802, Blast_Score=86, Evalue=2e-18, Organism=Drosophila melanogaster, GI24582226, Length=283, Percent_Identity=30.3886925795053, Blast_Score=132, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 30749; Mature: 30618
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLNLVQAWSQAKQRLEAAGLAGPVIDARLLVEAAADATRADIVTDPYRPLTPEQEARLQ CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHH DYLARREKREPVSHILGRKGFWKIMLRVTPDVLTPRPDTETVVDVALKAFPEHAPWSVLD HHHHHHHHCCHHHHHHCCCCCEEEEEEECCHHCCCCCCHHHHHHHHHHHCCCCCCCEEEE LGVGSGAILLAILAERPAAKGLGIDASEEALAVARDNAAALGLAGRTALLRGDWTAGLGD ECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCEEEEECCCCCCCCC SAFDLVVSNPPYIASDVLETLEPEVKDYEPRLALEGGADGLDAYRILAPEIVRVLKPGGR CCEEEEECCCCHHHHHHHHHHCCHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC FAVEIGYDQKDAVEALFRAAGAEDVRTIRDLADRDRVVAGAKKPLGN EEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GLNLVQAWSQAKQRLEAAGLAGPVIDARLLVEAAADATRADIVTDPYRPLTPEQEARLQ CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHH DYLARREKREPVSHILGRKGFWKIMLRVTPDVLTPRPDTETVVDVALKAFPEHAPWSVLD HHHHHHHHCCHHHHHHCCCCCEEEEEEECCHHCCCCCCHHHHHHHHHHHCCCCCCCEEEE LGVGSGAILLAILAERPAAKGLGIDASEEALAVARDNAAALGLAGRTALLRGDWTAGLGD ECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCEEEEECCCCCCCCC SAFDLVVSNPPYIASDVLETLEPEVKDYEPRLALEGGADGLDAYRILAPEIVRVLKPGGR CCEEEEECCCCHHHHHHHHHHCCHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC FAVEIGYDQKDAVEALFRAAGAEDVRTIRDLADRDRVVAGAKKPLGN EEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]