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The map label for this gene is yaeJ [H]

Identifier: 197104242

GI number: 197104242

Start: 856083

End: 856505

Strand: Reverse

Name: yaeJ [H]

Synonym: PHZ_c0776

Alternate gene names: 197104242

Gene position: 856505-856083 (Counterclockwise)

Preceding gene: 197104244

Following gene: 197104241

Centisome position: 21.43

GC content: 73.29

Gene sequence:

>423_bases
ATGATCGAGGTCACCCCCGCCATCCAGATCGCCGACGAGGAGGTGCAGCTGCGCGCCGTCCGCGCCTCGGGCCCCGGCGG
GCAGCACGTGAACAAGGTCTCGACGGCGATCGAGCTGCGGTTCGACGTGCGGGCCTCCCCGTCCCTGCCCGAGCCGGTGC
GGGCCCGGCTCTACGGCCTGGCGGGCAGCCGGCTGACGATGGACGGGGTGCTGGTGCTGGTCGCCCAGGAGCACCGCTCT
CAGGAGCTGAACCGGCAGGCCGCCGTCGAGCGCCTGATCGAGCTGGTCCGCGAGGCCGCCCGGCCGCCGCCCCCGCCGCG
CAAGAAGACGCGGCCCACGAAAGCCTCCAAGGAGCGCCGGCTGAAGGCCAAGGCGCAGCGGTCGGGCGTGAAGTCGATGC
GCGGGAAGGTGCGGTTCGACTAA

Upstream 100 bases:

>100_bases
GGCCCGCCGGAGGCGGTGTCGGTAATGAGCCGTACGAGCTGGGCGGGGCCGCGCATGAGGCGTCTATACCCCGCCCCGGA
AGCTTGGCAAAGCGGAAGCC

Downstream 100 bases:

>100_bases
CCTGTGCTGGCGCCCTTTCGCCGCATTGCCCTATAAGCTGCCGCCGACATGAAGCACGCCCGTCTGATCCCCGTCCTGGG
CCTGGTGGCCCTCGCCGGCG

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MIEVTPAIQIADEEVQLRAVRASGPGGQHVNKVSTAIELRFDVRASPSLPEPVRARLYGLAGSRLTMDGVLVLVAQEHRS
QELNRQAAVERLIELVREAARPPPPPRKKTRPTKASKERRLKAKAQRSGVKSMRGKVRFD

Sequences:

>Translated_140_residues
MIEVTPAIQIADEEVQLRAVRASGPGGQHVNKVSTAIELRFDVRASPSLPEPVRARLYGLAGSRLTMDGVLVLVAQEHRS
QELNRQAAVERLIELVREAARPPPPPRKKTRPTKASKERRLKAKAQRSGVKSMRGKVRFD
>Mature_140_residues
MIEVTPAIQIADEEVQLRAVRASGPGGQHVNKVSTAIELRFDVRASPSLPEPVRARLYGLAGSRLTMDGVLVLVAQEHRS
QELNRQAAVERLIELVREAARPPPPPRKKTRPTKASKERRLKAKAQRSGVKSMRGKVRFD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=138, Percent_Identity=55.0724637681159, Blast_Score=145, Evalue=1e-36,
Organism=Drosophila melanogaster, GI19921098, Length=128, Percent_Identity=35.15625, Blast_Score=77, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15533; Mature: 15533

Theoretical pI: Translated: 11.76; Mature: 11.76

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVTPAIQIADEEVQLRAVRASGPGGQHVNKVSTAIELRFDVRASPSLPEPVRARLYGL
CCCCCCCEEECCCCEEEEEEECCCCCCCHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHC
AGSRLTMDGVLVLVAQEHRSQELNRQAAVERLIELVREAARPPPPPRKKTRPTKASKERR
CCCEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
LKAKAQRSGVKSMRGKVRFD
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIEVTPAIQIADEEVQLRAVRASGPGGQHVNKVSTAIELRFDVRASPSLPEPVRARLYGL
CCCCCCCEEECCCCEEEEEEECCCCCCCHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHC
AGSRLTMDGVLVLVAQEHRSQELNRQAAVERLIELVREAARPPPPPRKKTRPTKASKERR
CCCEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
LKAKAQRSGVKSMRGKVRFD
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]