| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104241
Identifier: 197104241
GI number: 197104241
Start: 855498
End: 856034
Strand: Reverse
Name: 197104241
Synonym: PHZ_c0775
Alternate gene names: NA
Gene position: 856034-855498 (Counterclockwise)
Preceding gene: 197104242
Following gene: 197104239
Centisome position: 21.42
GC content: 75.61
Gene sequence:
>537_bases ATGAAGCACGCCCGTCTGATCCCCGTCCTGGGCCTGGTGGCCCTCGCCGGCGCCTGCGCCCCCACCCTCGGACCGCCGCC GCCCGGCCGCGGCGCGCCGCCTCCGGGCCCGGCCCGCTTCTCGGCCGCCGACTTCGCCTGGGCGCAGAAGAGCGGCCCGA ACGGCATCGCCGGGCGGCTGACCTATCGCCAGGGCCAGACCCGCTACACCTGCGCCGGATCGGGCGTGGTGCTGACGCCG GAAACCCCGTGGTCGGCCCGGCGCATGGCCCACCTCTACGGCTCCACCGAGCGCGCGGCCCTGCCGGCCGACGAGGTGCG CAAGCGCACGCCTTCCGCGCCGCAGGGCGACGCCGGGCCCTACGTGAAGCGCACCACCTGCGACGCCCAGGACCGGTTCA GCTTCTCGGGCCTGCCGAACGGGACCTGGTACGCCATCACCATCGCCCGGCCGGTCGGCCAGTCCGAGGGCGAGACCATC GCCATGATGCGCAAGGTGACCACCCGCGGCGGCCGCGTGGCGAACCTCACGCTGTAG
Upstream 100 bases:
>100_bases GGCGCAGCGGTCGGGCGTGAAGTCGATGCGCGGGAAGGTGCGGTTCGACTAACCTGTGCTGGCGCCCTTTCGCCGCATTG CCCTATAAGCTGCCGCCGAC
Downstream 100 bases:
>100_bases GGAAGGCGCCCCCCGAGGGAGAGCTGTCACGCAGCGGCCGAGGGGCTCCATCCGGCGCTTCAACGGCTGAAGCCCCCTCC ACCACTTCGTGGTCCCCCTC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKHARLIPVLGLVALAGACAPTLGPPPPGRGAPPPGPARFSAADFAWAQKSGPNGIAGRLTYRQGQTRYTCAGSGVVLTP ETPWSARRMAHLYGSTERAALPADEVRKRTPSAPQGDAGPYVKRTTCDAQDRFSFSGLPNGTWYAITIARPVGQSEGETI AMMRKVTTRGGRVANLTL
Sequences:
>Translated_178_residues MKHARLIPVLGLVALAGACAPTLGPPPPGRGAPPPGPARFSAADFAWAQKSGPNGIAGRLTYRQGQTRYTCAGSGVVLTP ETPWSARRMAHLYGSTERAALPADEVRKRTPSAPQGDAGPYVKRTTCDAQDRFSFSGLPNGTWYAITIARPVGQSEGETI AMMRKVTTRGGRVANLTL >Mature_178_residues MKHARLIPVLGLVALAGACAPTLGPPPPGRGAPPPGPARFSAADFAWAQKSGPNGIAGRLTYRQGQTRYTCAGSGVVLTP ETPWSARRMAHLYGSTERAALPADEVRKRTPSAPQGDAGPYVKRTTCDAQDRFSFSGLPNGTWYAITIARPVGQSEGETI AMMRKVTTRGGRVANLTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18756; Mature: 18756
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHARLIPVLGLVALAGACAPTLGPPPPGRGAPPPGPARFSAADFAWAQKSGPNGIAGRL CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEE TYRQGQTRYTCAGSGVVLTPETPWSARRMAHLYGSTERAALPADEVRKRTPSAPQGDAGP EECCCCEEEEECCCCEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCC YVKRTTCDAQDRFSFSGLPNGTWYAITIARPVGQSEGETIAMMRKVTTRGGRVANLTL CEEEEECCCCCCEEECCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHCCCEEEEECC >Mature Secondary Structure MKHARLIPVLGLVALAGACAPTLGPPPPGRGAPPPGPARFSAADFAWAQKSGPNGIAGRL CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEE TYRQGQTRYTCAGSGVVLTPETPWSARRMAHLYGSTERAALPADEVRKRTPSAPQGDAGP EECCCCEEEEECCCCEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCC YVKRTTCDAQDRFSFSGLPNGTWYAITIARPVGQSEGETIAMMRKVTTRGGRVANLTL CEEEEECCCCCCEEECCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA