| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104218
Identifier: 197104218
GI number: 197104218
Start: 826581
End: 827723
Strand: Reverse
Name: 197104218
Synonym: PHZ_c0752
Alternate gene names: NA
Gene position: 827723-826581 (Counterclockwise)
Preceding gene: 197104219
Following gene: 197104217
Centisome position: 20.71
GC content: 71.3
Gene sequence:
>1143_bases ATGCCGCAGCCGTTCGAAGTGTCATGGAGCGCCGCGGACGTGGCCGCGGTGCTGGACCAGGTGCGGGCCTACCCCTGGCC GCCGGCGCCGGCGGTCCCCGACGGCTGGGCCTACGGCTGCGACGGCGGCTACCTGCGGAGCCTGTGCGAGCACTGGACCG GCGCCTGGGACTGGCGCGCGGCCGTCGCCGAGCTGAACCGGTTCCCGCAGTTCACCGCCAGGGTGGAGGACTTCGACCTG CACTTCGTGCACGTGGTCGGCGAAGCGGGCGGCAAGCGGCCGCTGATCCTGACCCACGGGTGGCCCGGATCGCACTACGA GTTCTGGGAGAGCATCGAGAAGCTGGCGTTCCCGAGCCGGTTCGGCGGCGATCCGGCCGACGCCTTCGACCTGGTGATCC CGTCCCTGCCCGGCTTCGGATTCTCGTCGAAGCCCGAGCGCCCCATCGGCCAGCGCGCCACAGCCCGGCTGTTCAACGGG CTGATGACCCAGGTGCTGGGCTACGACCGCTATCTCGCCCAGGGCGGCGACTGGGGCGGCCTCGTCACCTCGTGGCTGGG CCGCGACCACGCCGCGCACGTGTCGGCCATCCACCTGAACATGATCGGCTTCCGCCCGGACGGGCCGCCGCAGTCGGACG CCGAGGTCGCCTGGATCCAGCGCCAGCAGGCGATGATGGACGTGATGGGCGCCTACTTCCGCCTGCAGGCCTCCAAGCCC CAGTCGATCGCCTGGATGGCGGCGGGCAACCCGGTGGGCCAGGCCGCCTGGATCGCCGAACGCTTCCACGACTGGGCCGA CCTGCGGGAGAAATCCCTCGACGAGGCCTTTCCCAAGGACCGGCTGCTGACCAACATCATGCTCTACGTGATGACCGGCA GCTTCACGACGGGCGCCTGGTACTACCGGGGCCTGATCGAGGAAGGCGGCGTGTCCCTTCCGGCGGGCGAGCGCTGCGAG ACGCCGACCGCCTTCGCCAACTTCCCCGGCGAGCCGCTCTACACCGCCCCGCCGCGGAGCTGGGCCGAGCGGGCCTACAA CATCGTCCGCTGGACTGAGATGCCGCGCGGCGGCCACTTCGCGGCGATGGAGGAGCCGGACCTGTTCGTGGACGAGGTCA GGGCTTGGGCGCGGGCGCTCTGA
Upstream 100 bases:
>100_bases GGCAATACCTGTCATGGCCGCCCCCCAGCTTCCGGCGCGGAGCTTGACCGCCGTCGCGTCATCCGTCGAGCCTCGCCGCA CAGCTTAGGAAGGAAGCCCC
Downstream 100 bases:
>100_bases GCGGCTAAAGGGCGGGCATGAGCCACGCCCGCTACGACTTCGCCTCGGACAACACCGCGCCCGCCGCGCCCGAGGCGCTG GAGGCGCTCGCCGCCGCCAA
Product: epoxide hydrolase
Products: NA
Alternate protein names: Epoxide hydratase [H]
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MPQPFEVSWSAADVAAVLDQVRAYPWPPAPAVPDGWAYGCDGGYLRSLCEHWTGAWDWRAAVAELNRFPQFTARVEDFDL HFVHVVGEAGGKRPLILTHGWPGSHYEFWESIEKLAFPSRFGGDPADAFDLVIPSLPGFGFSSKPERPIGQRATARLFNG LMTQVLGYDRYLAQGGDWGGLVTSWLGRDHAAHVSAIHLNMIGFRPDGPPQSDAEVAWIQRQQAMMDVMGAYFRLQASKP QSIAWMAAGNPVGQAAWIAERFHDWADLREKSLDEAFPKDRLLTNIMLYVMTGSFTTGAWYYRGLIEEGGVSLPAGERCE TPTAFANFPGEPLYTAPPRSWAERAYNIVRWTEMPRGGHFAAMEEPDLFVDEVRAWARAL
Sequences:
>Translated_380_residues MPQPFEVSWSAADVAAVLDQVRAYPWPPAPAVPDGWAYGCDGGYLRSLCEHWTGAWDWRAAVAELNRFPQFTARVEDFDL HFVHVVGEAGGKRPLILTHGWPGSHYEFWESIEKLAFPSRFGGDPADAFDLVIPSLPGFGFSSKPERPIGQRATARLFNG LMTQVLGYDRYLAQGGDWGGLVTSWLGRDHAAHVSAIHLNMIGFRPDGPPQSDAEVAWIQRQQAMMDVMGAYFRLQASKP QSIAWMAAGNPVGQAAWIAERFHDWADLREKSLDEAFPKDRLLTNIMLYVMTGSFTTGAWYYRGLIEEGGVSLPAGERCE TPTAFANFPGEPLYTAPPRSWAERAYNIVRWTEMPRGGHFAAMEEPDLFVDEVRAWARAL >Mature_379_residues PQPFEVSWSAADVAAVLDQVRAYPWPPAPAVPDGWAYGCDGGYLRSLCEHWTGAWDWRAAVAELNRFPQFTARVEDFDLH FVHVVGEAGGKRPLILTHGWPGSHYEFWESIEKLAFPSRFGGDPADAFDLVIPSLPGFGFSSKPERPIGQRATARLFNGL MTQVLGYDRYLAQGGDWGGLVTSWLGRDHAAHVSAIHLNMIGFRPDGPPQSDAEVAWIQRQQAMMDVMGAYFRLQASKPQ SIAWMAAGNPVGQAAWIAERFHDWADLREKSLDEAFPKDRLLTNIMLYVMTGSFTTGAWYYRGLIEEGGVSLPAGERCET PTAFANFPGEPLYTAPPRSWAERAYNIVRWTEMPRGGHFAAMEEPDLFVDEVRAWARAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
Organism=Homo sapiens, GI4503583, Length=409, Percent_Identity=31.5403422982885, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI209862837, Length=409, Percent_Identity=31.5403422982885, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17564944, Length=373, Percent_Identity=32.4396782841823, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI193207462, Length=361, Percent_Identity=26.5927977839335, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI20130139, Length=389, Percent_Identity=30.3341902313625, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24655327, Length=407, Percent_Identity=28.009828009828, Blast_Score=144, Evalue=7e-35, Organism=Drosophila melanogaster, GI19922580, Length=379, Percent_Identity=27.7044854881267, Blast_Score=123, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.3.2.10 [H]
Molecular weight: Translated: 42408; Mature: 42277
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPFEVSWSAADVAAVLDQVRAYPWPPAPAVPDGWAYGCDGGYLRSLCEHWTGAWDWRA CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCHHHH AVAELNRFPQFTARVEDFDLHFVHVVGEAGGKRPLILTHGWPGSHYEFWESIEKLAFPSR HHHHHHHCCHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCCHH FGGDPADAFDLVIPSLPGFGFSSKPERPIGQRATARLFNGLMTQVLGYDRYLAQGGDWGG CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LVTSWLGRDHAAHVSAIHLNMIGFRPDGPPQSDAEVAWIQRQQAMMDVMGAYFRLQASKP HHHHHHCCCHHHHEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCC QSIAWMAAGNPVGQAAWIAERFHDWADLREKSLDEAFPKDRLLTNIMLYVMTGSFTTGAW CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHH YYRGLIEEGGVSLPAGERCETPTAFANFPGEPLYTAPPRSWAERAYNIVRWTEMPRGGHF HHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCC AAMEEPDLFVDEVRAWARAL CCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure PQPFEVSWSAADVAAVLDQVRAYPWPPAPAVPDGWAYGCDGGYLRSLCEHWTGAWDWRA CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCCCHHHH AVAELNRFPQFTARVEDFDLHFVHVVGEAGGKRPLILTHGWPGSHYEFWESIEKLAFPSR HHHHHHHCCHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCCHH FGGDPADAFDLVIPSLPGFGFSSKPERPIGQRATARLFNGLMTQVLGYDRYLAQGGDWGG CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LVTSWLGRDHAAHVSAIHLNMIGFRPDGPPQSDAEVAWIQRQQAMMDVMGAYFRLQASKP HHHHHHCCCHHHHEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCC QSIAWMAAGNPVGQAAWIAERFHDWADLREKSLDEAFPKDRLLTNIMLYVMTGSFTTGAW CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHH YYRGLIEEGGVSLPAGERCETPTAFANFPGEPLYTAPPRSWAERAYNIVRWTEMPRGGHF HHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCC AAMEEPDLFVDEVRAWARAL CCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226695 [H]