| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104117
Identifier: 197104117
GI number: 197104117
Start: 700712
End: 702190
Strand: Direct
Name: 197104117
Synonym: PHZ_c0651
Alternate gene names: NA
Gene position: 700712-702190 (Clockwise)
Preceding gene: 197104116
Following gene: 197104118
Centisome position: 17.53
GC content: 71.81
Gene sequence:
>1479_bases ATGACCGGCGTCACCAAGCTGAAAACCCTTCTTGTCATGTCGCTCAGCGCGCTCGCCCTGGGGGCCTGCGGCGGCGGCGG CGCCGACAACGTCGCCTCGCCCGGCGAAGGCGCCTTCCCGCCCGGCAGCGGCGGCGGCACGGGCGGCGGCACGACCAACC CGCCCCCCGGCCAGGCGGCGGCGGACTGCCCGACCGGTTTCGCCAACGTCGGCACCGTGGCGAACGGCACGCTGCGCGCC TGCCAGCTGCCGTCCAAGATCGTCGGCAACCTGGTGGTCCCGGCCCGGGCCGGCACGGTCTACGCCATCAGCGGGCGGGT GGACGTGGGCGACGACCGCGGCGCCGATCCGAACAATCCGGTCGCGGGCGCCCAGCAGGGCATCCTGACCATCGAGCCGG GCGTCACGCTCTTCGGCTCGGGCGGCCTCGACTACATCAACGTCCAGCGCGGCAACCAGATCTTCGCCGAAGGCACCGCC TCGAACCCGATCATCTTCACCAGCCGCTCGAACATCGACGGCAACTCGGGCGCCGACCTGATCGGCCAGTGGGGCGGCAT CGTGATCGCCGGCCGCGCGCCGATCGCCTCGTGCCCGGCCGGCACGACCCCGCCGAACATCAACTGCGTGGCCACCTTCG AGGGCGGCGTCTCGCTCTACGGCGGCGCCAGCCCGACCGACAACTCGGGCCGCCTGCGCTACGTCCAGGTCCGCTACCCC GGCTTCGAGATCCAGCCGAACCGAGAGCTGAACGGCATCACCCTGCTGGGCGTCGGCTCGGGCACCACCATCGACCACGT CCAGGTGCACAACAGCTCGGACGACGGCATCGAGTTCTTCGGCGGCACGGTGAACCTGAAGCACGTGGTGATCACCGGCG CCGACGACGACAGCCTGGACACCGACGAGGGCTGGCGCGGCGGCGTGCAGTACCTGATCGTCCGCCAGCGGGCGAACGGC GGCGACCGCGGCTTCGAACAGAGCTCGGCCGGCGTGCAGGCCTCGCTGAACTCGCAGCCGAAGTTCGCCAACTACACCGT GATCGGCTCGGGCCGGACCGGGGCGGGCGACCTGCAGGTGCTGAACACCGGCACGGGCGGGCGCTTCATCAACGGCGTGC ACGCCTCGGCCAACAGCGCCGTGGCCTGTGTGGACGTGGACGACACCTCGACCCAGGCGGCGGCGCCGCGGTGGGACTCG GTGGTGCTGGCCTGCGCCACCGCCTTCCGGAACGACAGCGGCGTCGACGGCGCGGCCGCGGCGGCGCTGTTCGACGCCGG CGCCAACAACAGCTCGACCCACGTCTCGACGCTGAACGGCTTCGTCAACGGCGCGAACGAGGCCGCCCGGACCGCCACCG ATCCGAAGGCGATCTACGCGTTCTTCGACACCACCAACTACATCGGCGCCGTTCGGGACGCGAACGACACCTGGTGGCAG GGCTGGACCTGCGGCCTGGCCGCCGGCAGCAGCTGCTGA
Upstream 100 bases:
>100_bases CCTAGAACCCCGCCTGGGCAGGCGGGCGGCTCGGGTCCGGGGGAACGGATCCAGCATCACAGGTCTCGCGTGCGCCGCCA GAACCACGGTGGAGAACACG
Downstream 100 bases:
>100_bases TCACGCGGGGCGGGGCCTCGCGGCCCCGCCTCCTCCGCGTCCGACGAACTCCAGAGGCGATCCTGACATGACCAAGCTCC ACCGCCCGCTCGCCGGGCTG
Product: putative secreted protein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein; Serine/Threonine Protein Kinase; Cell Surface Receptor IPT/TIG Domain Protein; Secreted Protein; Drug/Metabolite Permease; Non-Specific Serine/Threonine Protein Kinase; Parallel Beta-Helix Repeat Protein
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTGVTKLKTLLVMSLSALALGACGGGGADNVASPGEGAFPPGSGGGTGGGTTNPPPGQAAADCPTGFANVGTVANGTLRA CQLPSKIVGNLVVPARAGTVYAISGRVDVGDDRGADPNNPVAGAQQGILTIEPGVTLFGSGGLDYINVQRGNQIFAEGTA SNPIIFTSRSNIDGNSGADLIGQWGGIVIAGRAPIASCPAGTTPPNINCVATFEGGVSLYGGASPTDNSGRLRYVQVRYP GFEIQPNRELNGITLLGVGSGTTIDHVQVHNSSDDGIEFFGGTVNLKHVVITGADDDSLDTDEGWRGGVQYLIVRQRANG GDRGFEQSSAGVQASLNSQPKFANYTVIGSGRTGAGDLQVLNTGTGGRFINGVHASANSAVACVDVDDTSTQAAAPRWDS VVLACATAFRNDSGVDGAAAAALFDAGANNSSTHVSTLNGFVNGANEAARTATDPKAIYAFFDTTNYIGAVRDANDTWWQ GWTCGLAAGSSC
Sequences:
>Translated_492_residues MTGVTKLKTLLVMSLSALALGACGGGGADNVASPGEGAFPPGSGGGTGGGTTNPPPGQAAADCPTGFANVGTVANGTLRA CQLPSKIVGNLVVPARAGTVYAISGRVDVGDDRGADPNNPVAGAQQGILTIEPGVTLFGSGGLDYINVQRGNQIFAEGTA SNPIIFTSRSNIDGNSGADLIGQWGGIVIAGRAPIASCPAGTTPPNINCVATFEGGVSLYGGASPTDNSGRLRYVQVRYP GFEIQPNRELNGITLLGVGSGTTIDHVQVHNSSDDGIEFFGGTVNLKHVVITGADDDSLDTDEGWRGGVQYLIVRQRANG GDRGFEQSSAGVQASLNSQPKFANYTVIGSGRTGAGDLQVLNTGTGGRFINGVHASANSAVACVDVDDTSTQAAAPRWDS VVLACATAFRNDSGVDGAAAAALFDAGANNSSTHVSTLNGFVNGANEAARTATDPKAIYAFFDTTNYIGAVRDANDTWWQ GWTCGLAAGSSC >Mature_491_residues TGVTKLKTLLVMSLSALALGACGGGGADNVASPGEGAFPPGSGGGTGGGTTNPPPGQAAADCPTGFANVGTVANGTLRAC QLPSKIVGNLVVPARAGTVYAISGRVDVGDDRGADPNNPVAGAQQGILTIEPGVTLFGSGGLDYINVQRGNQIFAEGTAS NPIIFTSRSNIDGNSGADLIGQWGGIVIAGRAPIASCPAGTTPPNINCVATFEGGVSLYGGASPTDNSGRLRYVQVRYPG FEIQPNRELNGITLLGVGSGTTIDHVQVHNSSDDGIEFFGGTVNLKHVVITGADDDSLDTDEGWRGGVQYLIVRQRANGG DRGFEQSSAGVQASLNSQPKFANYTVIGSGRTGAGDLQVLNTGTGGRFINGVHASANSAVACVDVDDTSTQAAAPRWDSV VLACATAFRNDSGVDGAAAAALFDAGANNSSTHVSTLNGFVNGANEAARTATDPKAIYAFFDTTNYIGAVRDANDTWWQG WTCGLAAGSSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49607; Mature: 49476
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVTKLKTLLVMSLSALALGACGGGGADNVASPGEGAFPPGSGGGTGGGTTNPPPGQAA CCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADCPTGFANVGTVANGTLRACQLPSKIVGNLVVPARAGTVYAISGRVDVGDDRGADPNNP CCCCCCCCCCCCCCCCCEEECCCCHHHHCCEEEECCCCEEEEEECEEECCCCCCCCCCCC VAGAQQGILTIEPGVTLFGSGGLDYINVQRGNQIFAEGTASNPIIFTSRSNIDGNSGADL CCCCCCCEEEECCCEEEEECCCCCEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCHH IGQWGGIVIAGRAPIASCPAGTTPPNINCVATFEGGVSLYGGASPTDNSGRLRYVQVRYP HCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEECC GFEIQPNRELNGITLLGVGSGTTIDHVQVHNSSDDGIEFFGGTVNLKHVVITGADDDSLD CEEECCCCCCCCEEEEEECCCCEEEEEEEECCCCCCEEEECCEEEEEEEEEECCCCCCCC TDEGWRGGVQYLIVRQRANGGDRGFEQSSAGVQASLNSQPKFANYTVIGSGRTGAGDLQV CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCEEE LNTGTGGRFINGVHASANSAVACVDVDDTSTQAAAPRWDSVVLACATAFRNDSGVDGAAA EECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHEEHHHHHCCCCCCCHHHH AALFDAGANNSSTHVSTLNGFVNGANEAARTATDPKAIYAFFDTTNYIGAVRDANDTWWQ HHHEECCCCCCCCEEEEHHHHHCCCCHHHHCCCCCCEEEEEEECCCCEEEEECCCCCEEC GWTCGLAAGSSC CEEEECCCCCCC >Mature Secondary Structure TGVTKLKTLLVMSLSALALGACGGGGADNVASPGEGAFPPGSGGGTGGGTTNPPPGQAA CCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADCPTGFANVGTVANGTLRACQLPSKIVGNLVVPARAGTVYAISGRVDVGDDRGADPNNP CCCCCCCCCCCCCCCCCEEECCCCHHHHCCEEEECCCCEEEEEECEEECCCCCCCCCCCC VAGAQQGILTIEPGVTLFGSGGLDYINVQRGNQIFAEGTASNPIIFTSRSNIDGNSGADL CCCCCCCEEEECCCEEEEECCCCCEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCHH IGQWGGIVIAGRAPIASCPAGTTPPNINCVATFEGGVSLYGGASPTDNSGRLRYVQVRYP HCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEECC GFEIQPNRELNGITLLGVGSGTTIDHVQVHNSSDDGIEFFGGTVNLKHVVITGADDDSLD CEEECCCCCCCCEEEEEECCCCEEEEEEEECCCCCCEEEECCEEEEEEEEEECCCCCCCC TDEGWRGGVQYLIVRQRANGGDRGFEQSSAGVQASLNSQPKFANYTVIGSGRTGAGDLQV CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCEEE LNTGTGGRFINGVHASANSAVACVDVDDTSTQAAAPRWDSVVLACATAFRNDSGVDGAAA EECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHEEHHHHHCCCCCCCHHHH AALFDAGANNSSTHVSTLNGFVNGANEAARTATDPKAIYAFFDTTNYIGAVRDANDTWWQ HHHEECCCCCCCCEEEEHHHHHCCCCHHHHCCCCCCEEEEEEECCCCEEEEECCCCCEEC GWTCGLAAGSSC CEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA