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The map label for this gene is 197104103

Identifier: 197104103

GI number: 197104103

Start: 686245

End: 686655

Strand: Reverse

Name: 197104103

Synonym: PHZ_c0637

Alternate gene names: NA

Gene position: 686655-686245 (Counterclockwise)

Preceding gene: 197104106

Following gene: 197104101

Centisome position: 17.18

GC content: 71.05

Gene sequence:

>411_bases
ATGTCCGAGACGTCCACCAAGGCGCCCGACCCGATGGACATTGCTCTCGGAGCCGCGGTCCGCATCCGGCGGCGGACGAT
CGGCATGTCGCAGGAGGCGCTGGCCGAGCAGTGCGGGGTCAGCTTCCAGCAGATCCAGAAGTACGAGAACGGCGCCAACC
GGATCTCCTTCTCGCGGCTGGTCCAGATCGCGCGCGCCCTGCGCTGCCGCGTCACCGACCTGATGGACGTGTTCGACGGG
CCCGACCGCGAGACCGCCACGGACCTCGACCTCCTGACCCGCATGCGCACGCCGGGCGCGCTCGAGCTGCTGGCGGCCTA
CGAGCGGCTCGCGCCCGAGGCCCGCAGCTCGCTGGTCAGCCTGCTGCGTACGGTCGCGCCCGAACGGGTCAAGGAATCCG
AGGCGGCCTGA

Upstream 100 bases:

>100_bases
GCTTTGCAGGGCTGCAACAAGGGCCTTTATTGGAAAGTCTGGATAACGCGGTTCGGGGGGAGCCGCTTGTACGTTGTCCG
GGGCTATGGAGGGAGAATTC

Downstream 100 bases:

>100_bases
GGCCCGCCCCGAGCTCTCAGTCCGCGGCCAGGGCCTTGTCCACCAGGGCGCGGGCCTCGGCGCCGGCCCAGTCGGCCTCT
CCGGCCACGCGGCCCATCTC

Product: transcriptional regulator, XRE family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSETSTKAPDPMDIALGAAVRIRRRTIGMSQEALAEQCGVSFQQIQKYENGANRISFSRLVQIARALRCRVTDLMDVFDG
PDRETATDLDLLTRMRTPGALELLAAYERLAPEARSSLVSLLRTVAPERVKESEAA

Sequences:

>Translated_136_residues
MSETSTKAPDPMDIALGAAVRIRRRTIGMSQEALAEQCGVSFQQIQKYENGANRISFSRLVQIARALRCRVTDLMDVFDG
PDRETATDLDLLTRMRTPGALELLAAYERLAPEARSSLVSLLRTVAPERVKESEAA
>Mature_135_residues
SETSTKAPDPMDIALGAAVRIRRRTIGMSQEALAEQCGVSFQQIQKYENGANRISFSRLVQIARALRCRVTDLMDVFDGP
DRETATDLDLLTRMRTPGALELLAAYERLAPEARSSLVSLLRTVAPERVKESEAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 15024; Mature: 14893

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETSTKAPDPMDIALGAAVRIRRRTIGMSQEALAEQCGVSFQQIQKYENGANRISFSRL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH
VQIARALRCRVTDLMDVFDGPDRETATDLDLLTRMRTPGALELLAAYERLAPEARSSLVS
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHH
LLRTVAPERVKESEAA
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SETSTKAPDPMDIALGAAVRIRRRTIGMSQEALAEQCGVSFQQIQKYENGANRISFSRL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH
VQIARALRCRVTDLMDVFDGPDRETATDLDLLTRMRTPGALELLAAYERLAPEARSSLVS
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHH
LLRTVAPERVKESEAA
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]