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The map label for this gene is rnk [C]

Identifier: 197104061

GI number: 197104061

Start: 634106

End: 634750

Strand: Direct

Name: rnk [C]

Synonym: PHZ_c0595

Alternate gene names: 197104061

Gene position: 634106-634750 (Clockwise)

Preceding gene: 197104053

Following gene: 197104063

Centisome position: 15.87

GC content: 72.71

Gene sequence:

>645_bases
GTGGAGGTGAAGACTTGTCAGCATCATCCTCAAATCCCTCGCCCGACAGGAGAGGGGCGCCGGCGCGGCCGGAAAGCACC
CCCTCGAACGTCATCCCCTTCGCCCCGCGCCCGCCCGCATCGCGTCCGCCTGGACCAGGGCCGGCGCCGTCCCACTCCCC
ATCCCCATCAGGGGGCGACGAGCCGCCTTCCGGCCCCTCCGCCGCCTGACAACCAGATAGACCCTCCAATGGAAACCAAG
ACCATGCTCGCCGACACCAAGACCCGCGAACGGGCCCGCACGCCGACCGTGCGCGTGGCCGAGGCCGACTACGACCGCCT
GCTCAACCTCGCCGACCACGACGGTCCCGGCGCCGAGCTGCTGGCCCGCGAACTCGACCGCGCCATCGTCGTGCGCGAGG
GCGAGAAGAGCCGCCCGTTCGTCCGCCTCGGCTCCACCGTCGAATACCGCGACCGGCTGACCGAGAAGGTCCGCACCGTC
GAGCTCGTGCCGCCCGACGCCGCCGACATCGACGCCAACCGCCTGTCGGTGCTCTCGCCGGTCGGCGCGGCGCTGCTGGG
CCTCTCGGTGGGCGACACCTTCAGCTGGACCGCCCCCGACGGCCGCCCCCGCGTCGTCACCGTCGAGGCCGTCCGGCGCG
ACTGA

Upstream 100 bases:

>100_bases
GCCTGTAACCCCGAGCCCGTTTAAAGCCGGCTGGCTGGGTTCGGGGATACTGCACATCTTCTCACGATTGTTCTGAAGCT
GCGCCCGCCGTTTCGCGCGG

Downstream 100 bases:

>100_bases
TCGCGCGCCCCCCGAATCTCCCGCCGCCCGCGAGACGCCCCCCGCTCGCGGCCAGGCGGGACGCGCGGCGCCCCCTCTCG
GGGGACCCTCTCGAGGATGC

Product: transcription elongation factor

Products: NA

Alternate protein names: Nucleoside Diphosphate Kinase Regulator; Regulator Of Nucleoside Diphosphate Kinase; Transcription Elongation Factor; Transcription Elongation Factor GreA/GreB Region; Transcription Elongation Factor GreA/GreB Family

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MEVKTCQHHPQIPRPTGEGRRRGRKAPPRTSSPSPRARPHRVRLDQGRRRPTPHPHQGATSRLPAPPPPDNQIDPPMETK
TMLADTKTRERARTPTVRVAEADYDRLLNLADHDGPGAELLARELDRAIVVREGEKSRPFVRLGSTVEYRDRLTEKVRTV
ELVPPDAADIDANRLSVLSPVGAALLGLSVGDTFSWTAPDGRPRVVTVEAVRRD

Sequences:

>Translated_214_residues
MEVKTCQHHPQIPRPTGEGRRRGRKAPPRTSSPSPRARPHRVRLDQGRRRPTPHPHQGATSRLPAPPPPDNQIDPPMETK
TMLADTKTRERARTPTVRVAEADYDRLLNLADHDGPGAELLARELDRAIVVREGEKSRPFVRLGSTVEYRDRLTEKVRTV
ELVPPDAADIDANRLSVLSPVGAALLGLSVGDTFSWTAPDGRPRVVTVEAVRRD
>Mature_214_residues
MEVKTCQHHPQIPRPTGEGRRRGRKAPPRTSSPSPRARPHRVRLDQGRRRPTPHPHQGATSRLPAPPPPDNQIDPPMETK
TMLADTKTRERARTPTVRVAEADYDRLLNLADHDGPGAELLARELDRAIVVREGEKSRPFVRLGSTVEYRDRLTEKVRTV
ELVPPDAADIDANRLSVLSPVGAALLGLSVGDTFSWTAPDGRPRVVTVEAVRRD

Specific function: Rnk And Sspa Can Functionally Replace P.Aeruginosa Alginate Regulatory Gene Algr2. [C]

COG id: COG0782

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23782; Mature: 23782

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: PS00830 GREAB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVKTCQHHPQIPRPTGEGRRRGRKAPPRTSSPSPRARPHRVRLDQGRRRPTPHPHQGAT
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
SRLPAPPPPDNQIDPPMETKTMLADTKTRERARTPTVRVAEADYDRLLNLADHDGPGAEL
CCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCEEEEECCCHHHHHHHCCCCCCCHHH
LARELDRAIVVREGEKSRPFVRLGSTVEYRDRLTEKVRTVELVPPDAADIDANRLSVLSP
HHHHHHHEEEEECCCCCCCEEEECCCHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHH
VGAALLGLSVGDTFSWTAPDGRPRVVTVEAVRRD
HHHHHHHCCCCCCEEECCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MEVKTCQHHPQIPRPTGEGRRRGRKAPPRTSSPSPRARPHRVRLDQGRRRPTPHPHQGAT
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
SRLPAPPPPDNQIDPPMETKTMLADTKTRERARTPTVRVAEADYDRLLNLADHDGPGAEL
CCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCEEEEECCCHHHHHHHCCCCCCCHHH
LARELDRAIVVREGEKSRPFVRLGSTVEYRDRLTEKVRTVELVPPDAADIDANRLSVLSP
HHHHHHHEEEEECCCCCCCEEEECCCHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHH
VGAALLGLSVGDTFSWTAPDGRPRVVTVEAVRRD
HHHHHHHCCCCCCEEECCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA