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The map label for this gene is atpF

Identifier: 197104053

GI number: 197104053

Start: 621830

End: 622333

Strand: Direct

Name: atpF

Synonym: PHZ_c0587

Alternate gene names: 197104053

Gene position: 621830-622333 (Clockwise)

Preceding gene: 197104052

Following gene: 197104061

Centisome position: 15.56

GC content: 72.22

Gene sequence:

>504_bases
ATGCCTGCTTTCCTGAATCCGGCCGAGGCGGAGTTCTGGGTCGGCGCCGGCCTGCTGATCTTCCTGGGGATCGTCTTCTT
CGGCGCCAAGGCCCACAAGGCCATCGCCGCGGCGCTCGACGCCAAGGCGGCCTCGATCCAGGCCAACCTCGACGAGGCGG
CCCGGATCCGCGACGAGGCCCGCCGCCTGCTCGAGGGCCTGCAGGCCGAACGGGCCGAGGCCGAGCGCCAGGCGAAGGAG
ATGCTGGCGACCGCCGAGGTCCAGGTCCGTCAGTTCGAGGCCGAGGCGAAGGCCAAGCTGGAGGAGGCCATCGAGCGCCG
CCGCCGGATGGCCGAGCAGAAGATCGCCACCGCCGAAGCCCAGGCCGCCGCCGAGGTCAAGGCCGCCGCCGCCGAGCTCG
CAGCTCAGATGGCCGAAAGCGTCCTGGCCCAGCGCCTGACCGGCGCGAAGGCGGACCCGCTGGTCGACCGCGCGATCGGC
CAGCTCGCCTCGAAGCTTCAGTAG

Upstream 100 bases:

>100_bases
GCGGACACGGCCAAGACCATCGTCGAGAAGCTGACCGGCAAGGCGGTGACGCCGGCCGAAGCCGGCGCGCTCAGCGCCAC
GCGCTCCTAGAGGACAGAAG

Downstream 100 bases:

>100_bases
GAAAAGATCAGCGGCGGCGCATGAAGCGCCGCCGCACCTTCACGGCGAACCGCGCTCGCTTCGGAAGCACCAGCCGCTCG
ACCCGCAGATACTGCTGCCA

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MPAFLNPAEAEFWVGAGLLIFLGIVFFGAKAHKAIAAALDAKAASIQANLDEAARIRDEARRLLEGLQAERAEAERQAKE
MLATAEVQVRQFEAEAKAKLEEAIERRRRMAEQKIATAEAQAAAEVKAAAAELAAQMAESVLAQRLTGAKADPLVDRAIG
QLASKLQ

Sequences:

>Translated_167_residues
MPAFLNPAEAEFWVGAGLLIFLGIVFFGAKAHKAIAAALDAKAASIQANLDEAARIRDEARRLLEGLQAERAEAERQAKE
MLATAEVQVRQFEAEAKAKLEEAIERRRRMAEQKIATAEAQAAAEVKAAAAELAAQMAESVLAQRLTGAKADPLVDRAIG
QLASKLQ
>Mature_166_residues
PAFLNPAEAEFWVGAGLLIFLGIVFFGAKAHKAIAAALDAKAASIQANLDEAARIRDEARRLLEGLQAERAEAERQAKEM
LATAEVQVRQFEAEAKAKLEEAIERRRRMAEQKIATAEAQAAAEVKAAAAELAAQMAESVLAQRLTGAKADPLVDRAIGQ
LASKLQ

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_PHEZH (B4RF13)

Other databases:

- EMBL:   CP000747
- RefSeq:   YP_002129430.1
- GeneID:   6790078
- GenomeReviews:   CP000747_GR
- KEGG:   pzu:PHZ_c0587
- HOGENOM:   HBG692690
- OMA:   KTEEFVA
- ProtClustDB:   PRK14475
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17905; Mature: 17774

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1f07f130)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFLNPAEAEFWVGAGLLIFLGIVFFGAKAHKAIAAALDAKAASIQANLDEAARIRDEA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLLEGLQAERAEAERQAKEMLATAEVQVRQFEAEAKAKLEEAIERRRRMAEQKIATAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAAEVKAAAAELAAQMAESVLAQRLTGAKADPLVDRAIGQLASKLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCH
>Mature Secondary Structure 
PAFLNPAEAEFWVGAGLLIFLGIVFFGAKAHKAIAAALDAKAASIQANLDEAARIRDEA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLLEGLQAERAEAERQAKEMLATAEVQVRQFEAEAKAKLEEAIERRRRMAEQKIATAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAAEVKAAAAELAAQMAESVLAQRLTGAKADPLVDRAIGQLASKLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA