| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104049
Identifier: 197104049
GI number: 197104049
Start: 619676
End: 620047
Strand: Direct
Name: 197104049
Synonym: PHZ_c0583
Alternate gene names: NA
Gene position: 619676-620047 (Clockwise)
Preceding gene: 197104048
Following gene: 197104050
Centisome position: 15.51
GC content: 70.7
Gene sequence:
>372_bases ATGGCCTCCCGACCCATGCCGCAAACGGACGAGACGCGCGAAGAGGCGCTTCGGCGCCTGGACGCCCAGGCCCGCGCCCT CCAGGCGCGGACCGCGCCCAAGGAGCCGACCGACTACGGCTCCAAGGCGGCGGGGTATGGCTATCGGCTGCTCGGCGTCC TGCTGGGCGGCCTCTTTGTCGGTCTGGGGTTCGGCGCAGCCGTCGACGCCCTCGCCGGCACGGGGCCTTGGGGAATGATC GTCGGAGTCCTGGTGGGCTTCGTGGTGTCGATCTGGATGGCCGTCCGCTCAGCGCAGCGGATGTCCGCCGAAGCGGAGAG GGAATGGGGTCCCGCGAAGGACCTCCCCCTCGACGGCGACGAGGAAGATTGA
Upstream 100 bases:
>100_bases GTCGGATAGATACTTCCGAGGCAGCCTTGACGCACTGCACACGCGTCTATAGGTTCCGCGCGACTTCAAGCCCCCGCCGT GGCGGCGACGTCGCGGTCTT
Downstream 100 bases:
>100_bases GGGAGTTCGAGGCGGCATGGCCGACCCGATGCACCAGTTCGAGGTCCAGAAGATCGTGGACCTCCCGGATCTGACCATCC CCGGCGTGGGCGTCATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MASRPMPQTDETREEALRRLDAQARALQARTAPKEPTDYGSKAAGYGYRLLGVLLGGLFVGLGFGAAVDALAGTGPWGMI VGVLVGFVVSIWMAVRSAQRMSAEAEREWGPAKDLPLDGDEED
Sequences:
>Translated_123_residues MASRPMPQTDETREEALRRLDAQARALQARTAPKEPTDYGSKAAGYGYRLLGVLLGGLFVGLGFGAAVDALAGTGPWGMI VGVLVGFVVSIWMAVRSAQRMSAEAEREWGPAKDLPLDGDEED >Mature_122_residues ASRPMPQTDETREEALRRLDAQARALQARTAPKEPTDYGSKAAGYGYRLLGVLLGGLFVGLGFGAAVDALAGTGPWGMIV GVLVGFVVSIWMAVRSAQRMSAEAEREWGPAKDLPLDGDEED
Specific function: Unknown
COG id: COG5336
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13108; Mature: 12977
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRPMPQTDETREEALRRLDAQARALQARTAPKEPTDYGSKAAGYGYRLLGVLLGGLFV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GLGFGAAVDALAGTGPWGMIVGVLVGFVVSIWMAVRSAQRMSAEAEREWGPAKDLPLDGD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC EED CCC >Mature Secondary Structure ASRPMPQTDETREEALRRLDAQARALQARTAPKEPTDYGSKAAGYGYRLLGVLLGGLFV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GLGFGAAVDALAGTGPWGMIVGVLVGFVVSIWMAVRSAQRMSAEAEREWGPAKDLPLDGD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC EED CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA