Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197104029

Identifier: 197104029

GI number: 197104029

Start: 596192

End: 597175

Strand: Direct

Name: 197104029

Synonym: PHZ_c0563

Alternate gene names: NA

Gene position: 596192-597175 (Clockwise)

Preceding gene: 197104028

Following gene: 197104030

Centisome position: 14.92

GC content: 71.34

Gene sequence:

>984_bases
ATGACCCTGCACACCAAGCTCTGCGACCTGCTGGAGGTGAGGCATCCGATCATGCTCGCCGGCATGGGCGGGGTGTCCTA
CGCCGAGCTCGTGGCGGCGGTGTCCAACGCCGGCGGCTATGGCGTGCTGGGCATGGCCGGCCGCGGGCCGGACTTCATCC
GCGACCAGATGCGGCAGGTCCGCAAGCTTACCGACAAGCCTTTCGGCGTGGACCTGCTGGCCGCCTCCCCGGAAAGCCTG
ACCGACTCGGTCGACGTGATCATAGAGGAGGGCGCCTCCAGCTTCGTCGCCGGCCTGGGCGTGCCGATGCCGATCCTCGA
GAAGCTGAAGAACGCCGGCCTGAAGGTCATGGTGGTCTGCGGGGCCGTGAAGCACGCGGTGAAGGCCGAACAGGCCGGCT
GCGATGCGGTGATCTGCCAGGGCGGCGAAGGCGGCGGTCACACCGGCCTCGTCGGCACCATGCCGCTGGTGGCCCAGGCG
GTGGAGGCGGTGAAGATCCCGGTGGTGGCGGCCGGCGGCCTCTACGACGGCCGGGGCCTGGCGGCGGCGCTGTCGCTGGG
CGCCGTCGGCGTCTGGATGGGCACGCGGTTCATCGCCTCGAAGGAGGCCCACGCCGGCGAGATGTACCGCCAGACCATCG
TCGCGGCCTCGGACGAGGACACGGTGCGCACCCGCTGCTACTCGGGCAAGCCGATGCGGGTGAAGAAGAACCCCTACGTC
GAGGACTGGGAAAGCCGCCCGGCCGACATCCAGCCCTTCCCGATGCAGGCGATGATCTCGCACAACGCCGGCGTCATGGG
CGGCATCGGCGGCCAGGTCGAGGGGCTGGACGCCGACAAGTCCTGCTTCGCCATGGGCCAGTCGGCGGGCGGCGTCCGCG
ACGTGCGTCCTGCGGGCGAGATCGTCGCGGCCATCATGGCCGAGGCCGAGGCGGCGATCGACCGGGTCGCGGCCCTGCGC
GGCCGGGCCATGGCCCCCGCCTGA

Upstream 100 bases:

>100_bases
GATGACGGTGGACGGCGCCTGGACCGCAGCCTGACCTCGCGTCACGGTTTTCAACGATAACCCAGGGCGCCATGCTCCTC
CCAAAGACCGGGAGGAGCCG

Downstream 100 bases:

>100_bases
CGGTCAGGGCGCGACGGCGAGGTAGCCGGTCGGGTCCCGGACGAAGCCGGCCGCCTCGGTCAGGCAGCCTTGCCAGGCGG
CCAGGTGCGTGCGGCCGCTG

Product: 2-nitropropane dioxygenase-like dioxygenase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MTLHTKLCDLLEVRHPIMLAGMGGVSYAELVAAVSNAGGYGVLGMAGRGPDFIRDQMRQVRKLTDKPFGVDLLAASPESL
TDSVDVIIEEGASSFVAGLGVPMPILEKLKNAGLKVMVVCGAVKHAVKAEQAGCDAVICQGGEGGGHTGLVGTMPLVAQA
VEAVKIPVVAAGGLYDGRGLAAALSLGAVGVWMGTRFIASKEAHAGEMYRQTIVAASDEDTVRTRCYSGKPMRVKKNPYV
EDWESRPADIQPFPMQAMISHNAGVMGGIGGQVEGLDADKSCFAMGQSAGGVRDVRPAGEIVAAIMAEAEAAIDRVAALR
GRAMAPA

Sequences:

>Translated_327_residues
MTLHTKLCDLLEVRHPIMLAGMGGVSYAELVAAVSNAGGYGVLGMAGRGPDFIRDQMRQVRKLTDKPFGVDLLAASPESL
TDSVDVIIEEGASSFVAGLGVPMPILEKLKNAGLKVMVVCGAVKHAVKAEQAGCDAVICQGGEGGGHTGLVGTMPLVAQA
VEAVKIPVVAAGGLYDGRGLAAALSLGAVGVWMGTRFIASKEAHAGEMYRQTIVAASDEDTVRTRCYSGKPMRVKKNPYV
EDWESRPADIQPFPMQAMISHNAGVMGGIGGQVEGLDADKSCFAMGQSAGGVRDVRPAGEIVAAIMAEAEAAIDRVAALR
GRAMAPA
>Mature_326_residues
TLHTKLCDLLEVRHPIMLAGMGGVSYAELVAAVSNAGGYGVLGMAGRGPDFIRDQMRQVRKLTDKPFGVDLLAASPESLT
DSVDVIIEEGASSFVAGLGVPMPILEKLKNAGLKVMVVCGAVKHAVKAEQAGCDAVICQGGEGGGHTGLVGTMPLVAQAV
EAVKIPVVAAGGLYDGRGLAAALSLGAVGVWMGTRFIASKEAHAGEMYRQTIVAASDEDTVRTRCYSGKPMRVKKNPYVE
DWESRPADIQPFPMQAMISHNAGVMGGIGGQVEGLDADKSCFAMGQSAGGVRDVRPAGEIVAAIMAEAEAAIDRVAALRG
RAMAPA

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 33802; Mature: 33670

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLHTKLCDLLEVRHPIMLAGMGGVSYAELVAAVSNAGGYGVLGMAGRGPDFIRDQMRQV
CCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
RKLTDKPFGVDLLAASPESLTDSVDVIIEEGASSFVAGLGVPMPILEKLKNAGLKVMVVC
HHHHCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCEEEEEH
GAVKHAVKAEQAGCDAVICQGGEGGGHTGLVGTMPLVAQAVEAVKIPVVAAGGLYDGRGL
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHH
AAALSLGAVGVWMGTRFIASKEAHAGEMYRQTIVAASDEDTVRTRCYSGKPMRVKKNPYV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEECCCCC
EDWESRPADIQPFPMQAMISHNAGVMGGIGGQVEGLDADKSCFAMGQSAGGVRDVRPAGE
CCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHH
IVAAIMAEAEAAIDRVAALRGRAMAPA
HHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TLHTKLCDLLEVRHPIMLAGMGGVSYAELVAAVSNAGGYGVLGMAGRGPDFIRDQMRQV
CCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
RKLTDKPFGVDLLAASPESLTDSVDVIIEEGASSFVAGLGVPMPILEKLKNAGLKVMVVC
HHHHCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCEEEEEH
GAVKHAVKAEQAGCDAVICQGGEGGGHTGLVGTMPLVAQAVEAVKIPVVAAGGLYDGRGL
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHH
AAALSLGAVGVWMGTRFIASKEAHAGEMYRQTIVAASDEDTVRTRCYSGKPMRVKKNPYV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEECCCCC
EDWESRPADIQPFPMQAMISHNAGVMGGIGGQVEGLDADKSCFAMGQSAGGVRDVRPAGE
CCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHH
IVAAIMAEAEAAIDRVAALRGRAMAPA
HHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA