| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104022
Identifier: 197104022
GI number: 197104022
Start: 587200
End: 588381
Strand: Direct
Name: 197104022
Synonym: PHZ_c0556
Alternate gene names: NA
Gene position: 587200-588381 (Clockwise)
Preceding gene: 197104020
Following gene: 197104025
Centisome position: 14.69
GC content: 69.37
Gene sequence:
>1182_bases ATGCCGTACGTCGAGGGCCGGACGATCCACGACGCCGACAGCCATATCATGGAGCTGCCGGGGACGATCCACCGCTATCT GGACCCCAAGGCGCGCGACGCCTTCGTGGAAAAGACCGGGCGCAAGGACGTCCTGCCCGAGTGGTTCGCCAAGGCCGCCG CCCAGCAGGAGGACCCCGAGTTCCGGGCCGGCGCCGAGGCGGGCATACTCCTGCGGAAGAACTACGAGGCCCTGGGCGCC TTCCGGGCCGAGGACCGGCCGAAGACCCTGGACTATCTGGGCTTCGCCTCGCAGCTCGTCTTCACCACCGCCTGCCTTTC GAACTGGGGGCTGGAGCAGATGGGCGAGGTCGAGCTCGCCCTGGAGGCCGCCCGCGCCCACAACCGGATGATGACCGAGT TCTGCTCGGTGGACCGGCGGCTGCTGGCCACCGGCTACGTCCCGCTGGTGGACCGGGCGCGCGCGCCGCAGATCGCCCGC GAGGCGATCGCCCTGGGGGCCAAGGGCCTGGTGATTCCCTCGCGCCATCCGCCGGGCTTCTCGCCCAGCCATGCTGAGCT CGATCCCCTCTGGGCGCTGGCGGAGGAGGCGGGCCTGCCGATCCTCTTCCACGTCGGCGGCGAGGAGAAGATGGCGCCCG ACTACCTCGAGAACGGCCTGCCGCGGGTGAAGGACTTCCACGGCGGGGACGAGAACTTCACCTCGGTCACCTTCATGGCG ATCCCGATCAGCATCTGGCAGACGCTGTCGGTGCTGGTGATCGACGGCGTCTTCGACCGCTTCCCCAACCTGAAGTTCGG CGCCATCGAGCTTGGCGCCTCGTGGCTGCCCAGCCTGATGCGGTTCCTGGATTCCGGCTGCGCCGCCTTCGGCAAGGAGG AGCGGCTGCAGAAGCTGTCGGCCCGGCCCAGCGAGATCCTGCGCCGCCAGCTGCGGGTCACGCCCTATCCGCACGAGGAC GTGCGCTGGATCATGGAGAACGCCGGCGAGGAGATGGTGCTGTTCTCGTCCGACTTCCCGCATGTCGAGGGCGGCCGCAA TCCGCTGAAGCGGTTCAACGACAGCCTCGAAGGGGTCGGCGAGGCGGCCCGGCGGCGCTTCTACCGCGACAACTTCATCG ACCTGATGGGCAAGGGCCTCGATCCGGCCCTGCACGACCTGCCCTCGCTGGCGGCCGCCTAG
Upstream 100 bases:
>100_bases CGCCACCTCGACGGGATCGCGAAGCCAGAAGCCTTGACGGGCCGGGTTCGAAGGCTCGGAATGCCGGGACAAGAATGAGC TCGTCTTGGGAGGATGCGCC
Downstream 100 bases:
>100_bases GCGACCCGGGCGTCGCGCGGAGGGGCGGCCACGGCCCGGTCGATGGTGGCCAGCAGGTCGGGGATCTGGATCGGCTTGGA GGCGTGCTCGGCGAACCCCA
Product: putative Amidohydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MPYVEGRTIHDADSHIMELPGTIHRYLDPKARDAFVEKTGRKDVLPEWFAKAAAQQEDPEFRAGAEAGILLRKNYEALGA FRAEDRPKTLDYLGFASQLVFTTACLSNWGLEQMGEVELALEAARAHNRMMTEFCSVDRRLLATGYVPLVDRARAPQIAR EAIALGAKGLVIPSRHPPGFSPSHAELDPLWALAEEAGLPILFHVGGEEKMAPDYLENGLPRVKDFHGGDENFTSVTFMA IPISIWQTLSVLVIDGVFDRFPNLKFGAIELGASWLPSLMRFLDSGCAAFGKEERLQKLSARPSEILRRQLRVTPYPHED VRWIMENAGEEMVLFSSDFPHVEGGRNPLKRFNDSLEGVGEAARRRFYRDNFIDLMGKGLDPALHDLPSLAAA
Sequences:
>Translated_393_residues MPYVEGRTIHDADSHIMELPGTIHRYLDPKARDAFVEKTGRKDVLPEWFAKAAAQQEDPEFRAGAEAGILLRKNYEALGA FRAEDRPKTLDYLGFASQLVFTTACLSNWGLEQMGEVELALEAARAHNRMMTEFCSVDRRLLATGYVPLVDRARAPQIAR EAIALGAKGLVIPSRHPPGFSPSHAELDPLWALAEEAGLPILFHVGGEEKMAPDYLENGLPRVKDFHGGDENFTSVTFMA IPISIWQTLSVLVIDGVFDRFPNLKFGAIELGASWLPSLMRFLDSGCAAFGKEERLQKLSARPSEILRRQLRVTPYPHED VRWIMENAGEEMVLFSSDFPHVEGGRNPLKRFNDSLEGVGEAARRRFYRDNFIDLMGKGLDPALHDLPSLAAA >Mature_392_residues PYVEGRTIHDADSHIMELPGTIHRYLDPKARDAFVEKTGRKDVLPEWFAKAAAQQEDPEFRAGAEAGILLRKNYEALGAF RAEDRPKTLDYLGFASQLVFTTACLSNWGLEQMGEVELALEAARAHNRMMTEFCSVDRRLLATGYVPLVDRARAPQIARE AIALGAKGLVIPSRHPPGFSPSHAELDPLWALAEEAGLPILFHVGGEEKMAPDYLENGLPRVKDFHGGDENFTSVTFMAI PISIWQTLSVLVIDGVFDRFPNLKFGAIELGASWLPSLMRFLDSGCAAFGKEERLQKLSARPSEILRRQLRVTPYPHEDV RWIMENAGEEMVLFSSDFPHVEGGRNPLKRFNDSLEGVGEAARRRFYRDNFIDLMGKGLDPALHDLPSLAAA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43826; Mature: 43695
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYVEGRTIHDADSHIMELPGTIHRYLDPKARDAFVEKTGRKDVLPEWFAKAAAQQEDPE CCCCCCCEECCCHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC FRAGAEAGILLRKNYEALGAFRAEDRPKTLDYLGFASQLVFTTACLSNWGLEQMGEVELA HHCCCCCCEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHH LEAARAHNRMMTEFCSVDRRLLATGYVPLVDRARAPQIAREAIALGAKGLVIPSRHPPGF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCEECCCCCCCC SPSHAELDPLWALAEEAGLPILFHVGGEEKMAPDYLENGLPRVKDFHGGDENFTSVTFMA CCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCHHHCCCCCCCCCEEEEEE IPISIWQTLSVLVIDGVFDRFPNLKFGAIELGASWLPSLMRFLDSGCAAFGKEERLQKLS HHHHHHHHHHHHHHHHHHHHCCCCEECHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHC ARPSEILRRQLRVTPYPHEDVRWIMENAGEEMVLFSSDFPHVEGGRNPLKRFNDSLEGVG CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH EAARRRFYRDNFIDLMGKGLDPALHDLPSLAAA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure PYVEGRTIHDADSHIMELPGTIHRYLDPKARDAFVEKTGRKDVLPEWFAKAAAQQEDPE CCCCCCEECCCHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC FRAGAEAGILLRKNYEALGAFRAEDRPKTLDYLGFASQLVFTTACLSNWGLEQMGEVELA HHCCCCCCEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHH LEAARAHNRMMTEFCSVDRRLLATGYVPLVDRARAPQIAREAIALGAKGLVIPSRHPPGF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCEECCCCCCCC SPSHAELDPLWALAEEAGLPILFHVGGEEKMAPDYLENGLPRVKDFHGGDENFTSVTFMA CCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCHHHCCCCCCCCCEEEEEE IPISIWQTLSVLVIDGVFDRFPNLKFGAIELGASWLPSLMRFLDSGCAAFGKEERLQKLS HHHHHHHHHHHHHHHHHHHHCCCCEECHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHC ARPSEILRRQLRVTPYPHEDVRWIMENAGEEMVLFSSDFPHVEGGRNPLKRFNDSLEGVG CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH EAARRRFYRDNFIDLMGKGLDPALHDLPSLAAA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA