| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ywrD [H]
Identifier: 197103989
GI number: 197103989
Start: 548442
End: 550103
Strand: Reverse
Name: ywrD [H]
Synonym: PHZ_c0523
Alternate gene names: 197103989
Gene position: 550103-548442 (Counterclockwise)
Preceding gene: 197103992
Following gene: 197103988
Centisome position: 13.77
GC content: 72.44
Gene sequence:
>1662_bases GTGGGGCCCGGCGACCGGATCGACGGCGCCACCTTCGCCAGCCGTTCGGCGGCCTGGGGCCTGCACGGGGCGGCGGCCAC CGCCCACCCCCTCGCCACCCTCGCCGCCATCGAGATCCTCAAGGCCGGTGGCTCGGCGGTGGACGCCGCCGTGGCCGCCA ATGCGGTGCTGGGCTTCGCCGAGCCCATCGCCTGCGGCATCGGCGGCGACTGTTTCGTGATGCTGTGGGATCCGAAGCAG GGGAAGGTCGTCGGCCTGAACGGCTCGGGCCGCAGCCCGCGCGGGCTGTCGCTGGCGACCGTCCGGGCGCGGGCGAAGAA CGGCTTCATCCCCAGCCACGGCGCCATCTCGGTCAGCGTGCCGGGCGCCGTCGACGCCTGGTGGAGCCTGCACCAGCGCT ACGGCAAGCTGCCGTGGAAGAGCCTGTTCGAGCCGGCGATCCGCCACGCCACCGAGGGCGCGCCGATCACCCAGAACGTC GCCTACTACCTGGAGCGCTCGTTCAGCGCCTTCACCCGGCCCGGCTCGGGCATCGAGGAGGTGGAGAACTTCAAGGCCGT CTGGGCCCCCGAGGGCCGGGTCCCCGTCGAGGGCGAGGTGTTCAGGAACCCGCGCCTGGCGGCCACCTACCGCCGGATCG CCGAGGGCGGCGGGCGCGAGTTCTACGAGGGCGAGACCGCCCGGGCCATCGAGGCCTACTTCAAGCGCATCGGCGGCTGG ATGACCCGCGCCGACCTCGCCGCCCACCGGTCGGAGTGGGTGGCCCCGGTCTCGTCCAGCTACCGCGGGGTCGACGTCTG GGCCCTGCCGCCCAACAGCCAGGGGATCGCCACCCTGCAGCTGCTGAACATCCTCGAGCAGTTCGACGTGAAGGCGATGG GCTTCCAGTCGGCGGCGGCGATCCACCACGCGGTGGAGGCCAAGCGGCTGGCCTTCGAGGACCGCGCCCGCCACTACGCC GATCCCGCCTTCTACAAGGCGCCGATCGAGCACCTGGTCTCCAAGGCCTATGCGAAGGAGCGCGCGGCCCTGATCCGGCC TGACCGCATCCTGCGGGAGATCGCCCCCTTCCAGGCCCCCAGCCGCGGCGACACCACCTACTTCACCACCGCCGACGCCG ACGGGATGATGGTCTCGATCATCCAGTCCAACTACCGGGGCATGGGCTCGGGCCTGTCGCCCGACGACCTGGGCTTCATG TTCCAGGACCGCGGCGAGCTGTTCGCCCTGCAGGACGGCCATCCGAACCTCTACGCGCCCGGCAAGCGGCCCTTCCAGAC CATCATCCCGGGCTTCGCCACGCGCGAGGGCAAGCCGTGGCTGTCGTTCGGGGTCATGGGCGGCGACATGCAGCCCCAGG GCCAGGCGCAGATCATCTCCAACATGGTCGACCACGGCCTGTCCCTGCAGGAGGCGGGCGATGCGCCCCGCTGGCATCAC GAGGGCGGCTCCGAGCCCACCGGGCAGAAGCTGGACCCGCTGGGCCTGCTGCGGCTGGAGACCGGCGTGCCCGCCAGGAC CAAGGCGGCCCTCGCCGCCCTCGGCTGGAAGCTGGGCGAGCCCGACGGCGGCTTCGGCGGCTACCAGGCGGTCGAGCGCT GGCCCGGCCGCTACGCCGCGGCCAGCGAGATGCGCAAGGACGGCATGGCTCTGGCCTACTAG
Upstream 100 bases:
>100_bases CCTGCCCGCCGCCGCCCTGGCCGCGCCCCTGGCCGGGCCTCTGGCCGCGCCCGCGTTAGCGGACAGCCGCAGCCAGAACC CCAACCGGAACCGGCCCGAC
Downstream 100 bases:
>100_bases GGACGTCCCCGATGACCTACGAGGAGATGCGCGCCATCGTGCTGGCCTTCCCCGGCGCCGAGGAGGGCAAGAGCTACGGC AAGCCCGCCTTCCTGGTGAA
Product: gamma-glutamyltranspeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MGPGDRIDGATFASRSAAWGLHGAAATAHPLATLAAIEILKAGGSAVDAAVAANAVLGFAEPIACGIGGDCFVMLWDPKQ GKVVGLNGSGRSPRGLSLATVRARAKNGFIPSHGAISVSVPGAVDAWWSLHQRYGKLPWKSLFEPAIRHATEGAPITQNV AYYLERSFSAFTRPGSGIEEVENFKAVWAPEGRVPVEGEVFRNPRLAATYRRIAEGGGREFYEGETARAIEAYFKRIGGW MTRADLAAHRSEWVAPVSSSYRGVDVWALPPNSQGIATLQLLNILEQFDVKAMGFQSAAAIHHAVEAKRLAFEDRARHYA DPAFYKAPIEHLVSKAYAKERAALIRPDRILREIAPFQAPSRGDTTYFTTADADGMMVSIIQSNYRGMGSGLSPDDLGFM FQDRGELFALQDGHPNLYAPGKRPFQTIIPGFATREGKPWLSFGVMGGDMQPQGQAQIISNMVDHGLSLQEAGDAPRWHH EGGSEPTGQKLDPLGLLRLETGVPARTKAALAALGWKLGEPDGGFGGYQAVERWPGRYAAASEMRKDGMALAY
Sequences:
>Translated_553_residues MGPGDRIDGATFASRSAAWGLHGAAATAHPLATLAAIEILKAGGSAVDAAVAANAVLGFAEPIACGIGGDCFVMLWDPKQ GKVVGLNGSGRSPRGLSLATVRARAKNGFIPSHGAISVSVPGAVDAWWSLHQRYGKLPWKSLFEPAIRHATEGAPITQNV AYYLERSFSAFTRPGSGIEEVENFKAVWAPEGRVPVEGEVFRNPRLAATYRRIAEGGGREFYEGETARAIEAYFKRIGGW MTRADLAAHRSEWVAPVSSSYRGVDVWALPPNSQGIATLQLLNILEQFDVKAMGFQSAAAIHHAVEAKRLAFEDRARHYA DPAFYKAPIEHLVSKAYAKERAALIRPDRILREIAPFQAPSRGDTTYFTTADADGMMVSIIQSNYRGMGSGLSPDDLGFM FQDRGELFALQDGHPNLYAPGKRPFQTIIPGFATREGKPWLSFGVMGGDMQPQGQAQIISNMVDHGLSLQEAGDAPRWHH EGGSEPTGQKLDPLGLLRLETGVPARTKAALAALGWKLGEPDGGFGGYQAVERWPGRYAAASEMRKDGMALAY >Mature_552_residues GPGDRIDGATFASRSAAWGLHGAAATAHPLATLAAIEILKAGGSAVDAAVAANAVLGFAEPIACGIGGDCFVMLWDPKQG KVVGLNGSGRSPRGLSLATVRARAKNGFIPSHGAISVSVPGAVDAWWSLHQRYGKLPWKSLFEPAIRHATEGAPITQNVA YYLERSFSAFTRPGSGIEEVENFKAVWAPEGRVPVEGEVFRNPRLAATYRRIAEGGGREFYEGETARAIEAYFKRIGGWM TRADLAAHRSEWVAPVSSSYRGVDVWALPPNSQGIATLQLLNILEQFDVKAMGFQSAAAIHHAVEAKRLAFEDRARHYAD PAFYKAPIEHLVSKAYAKERAALIRPDRILREIAPFQAPSRGDTTYFTTADADGMMVSIIQSNYRGMGSGLSPDDLGFMF QDRGELFALQDGHPNLYAPGKRPFQTIIPGFATREGKPWLSFGVMGGDMQPQGQAQIISNMVDHGLSLQEAGDAPRWHHE GGSEPTGQKLDPLGLLRLETGVPARTKAALAALGWKLGEPDGGFGGYQAVERWPGRYAAASEMRKDGMALAY
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=534, Percent_Identity=27.5280898876405, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI73915090, Length=534, Percent_Identity=27.5280898876405, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI73915096, Length=534, Percent_Identity=27.5280898876405, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI73915094, Length=534, Percent_Identity=27.5280898876405, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI113429324, Length=532, Percent_Identity=27.2556390977444, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI113429326, Length=540, Percent_Identity=26.4814814814815, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI109148539, Length=479, Percent_Identity=26.5135699373695, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI153266885, Length=550, Percent_Identity=22, Blast_Score=83, Evalue=6e-16, Organism=Homo sapiens, GI153266901, Length=551, Percent_Identity=21.9600725952813, Blast_Score=83, Evalue=7e-16, Organism=Escherichia coli, GI1789856, Length=547, Percent_Identity=31.0786106032907, Blast_Score=242, Evalue=4e-65, Organism=Caenorhabditis elegans, GI193208247, Length=514, Percent_Identity=24.3190661478599, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI193208245, Length=514, Percent_Identity=24.3190661478599, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI72000294, Length=479, Percent_Identity=25.2609603340292, Blast_Score=121, Evalue=8e-28, Organism=Caenorhabditis elegans, GI212646519, Length=479, Percent_Identity=25.2609603340292, Blast_Score=121, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17542894, Length=490, Percent_Identity=25.5102040816327, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17506189, Length=489, Percent_Identity=24.9488752556237, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI18859893, Length=477, Percent_Identity=28.3018867924528, Blast_Score=139, Evalue=7e-33, Organism=Drosophila melanogaster, GI161077878, Length=502, Percent_Identity=24.7011952191235, Blast_Score=133, Evalue=4e-31, Organism=Drosophila melanogaster, GI24642670, Length=502, Percent_Identity=24.7011952191235, Blast_Score=133, Evalue=4e-31, Organism=Drosophila melanogaster, GI24642666, Length=502, Percent_Identity=24.7011952191235, Blast_Score=133, Evalue=4e-31, Organism=Drosophila melanogaster, GI45551474, Length=502, Percent_Identity=24.7011952191235, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI161077880, Length=502, Percent_Identity=24.7011952191235, Blast_Score=132, Evalue=6e-31, Organism=Drosophila melanogaster, GI161077496, Length=518, Percent_Identity=25.0965250965251, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI18859741, Length=482, Percent_Identity=24.6887966804979, Blast_Score=93, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 59526; Mature: 59395
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPGDRIDGATFASRSAAWGLHGAAATAHPLATLAAIEILKAGGSAVDAAVAANAVLGFA CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EPIACGIGGDCFVMLWDPKQGKVVGLNGSGRSPRGLSLATVRARAKNGFIPSHGAISVSV CHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEC PGAVDAWWSLHQRYGKLPWKSLFEPAIRHATEGAPITQNVAYYLERSFSAFTRPGSGIEE CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH VENFKAVWAPEGRVPVEGEVFRNPRLAATYRRIAEGGGREFYEGETARAIEAYFKRIGGW HHCCEEEECCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCH MTRADLAAHRSEWVAPVSSSYRGVDVWALPPNSQGIATLQLLNILEQFDVKAMGFQSAAA HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHCHHHHHH IHHAVEAKRLAFEDRARHYADPAFYKAPIEHLVSKAYAKERAALIRPDRILREIAPFQAP HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC SRGDTTYFTTADADGMMVSIIQSNYRGMGSGLSPDDLGFMFQDRGELFALQDGHPNLYAP CCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHCCEEEECCCCEEEEECCCCCCCCC GKRPFQTIIPGFATREGKPWLSFGVMGGDMQPQGQAQIISNMVDHGLSLQEAGDAPRWHH CCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCC EGGSEPTGQKLDPLGLLRLETGVPARTKAALAALGWKLGEPDGGFGGYQAVERWPGRYAA CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHH ASEMRKDGMALAY HHHHHHCCCEECC >Mature Secondary Structure GPGDRIDGATFASRSAAWGLHGAAATAHPLATLAAIEILKAGGSAVDAAVAANAVLGFA CCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EPIACGIGGDCFVMLWDPKQGKVVGLNGSGRSPRGLSLATVRARAKNGFIPSHGAISVSV CHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEC PGAVDAWWSLHQRYGKLPWKSLFEPAIRHATEGAPITQNVAYYLERSFSAFTRPGSGIEE CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH VENFKAVWAPEGRVPVEGEVFRNPRLAATYRRIAEGGGREFYEGETARAIEAYFKRIGGW HHCCEEEECCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCH MTRADLAAHRSEWVAPVSSSYRGVDVWALPPNSQGIATLQLLNILEQFDVKAMGFQSAAA HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHCHHHHHH IHHAVEAKRLAFEDRARHYADPAFYKAPIEHLVSKAYAKERAALIRPDRILREIAPFQAP HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC SRGDTTYFTTADADGMMVSIIQSNYRGMGSGLSPDDLGFMFQDRGELFALQDGHPNLYAP CCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHCCEEEECCCCEEEEECCCCCCCCC GKRPFQTIIPGFATREGKPWLSFGVMGGDMQPQGQAQIISNMVDHGLSLQEAGDAPRWHH CCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCC EGGSEPTGQKLDPLGLLRLETGVPARTKAALAALGWKLGEPDGGFGGYQAVERWPGRYAA CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHH ASEMRKDGMALAY HHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]