| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103959
Identifier: 197103959
GI number: 197103959
Start: 518007
End: 519041
Strand: Direct
Name: 197103959
Synonym: PHZ_c0493
Alternate gene names: NA
Gene position: 518007-519041 (Clockwise)
Preceding gene: 197103958
Following gene: 197103960
Centisome position: 12.96
GC content: 65.6
Gene sequence:
>1035_bases ATGTTCTTTAAGCCGCTGGGCCGCCAGGCCGCCAAGCCCGCCCAAGCCCCCCTCGGGGCGCCTGCCGCCGCGCCGCCTGT CGAGCAGGCGACGATCAACGTGCGCTTCTTCACCGACTATCCGGTGTGCAACTACAAGTGCCCCTACTGCGTGGCCGGCC ACGGACCGCCCGAGGGCCGCGGGCCGAGCCCCTGGGACGAGGACCGCTACCTCCAGATCATCGACAACATCTGCAAGCTG CCGTTCCCCATCAACATCCGCATCGGGGTGGGCGGCGAGTTCTTCATCTCGAAGGTGCTGGTGGAGGGCGCGCGGCGCCT GGGCGCCTCGGAAAACGTCCGCGTCCTGAACCTTATCACCAACCTCAGCTTCCACCCAAAGCAGTACGCCCGGATCCTGG CTGGAATCCCCAAGGAGAAGGTGGCGCTGGTGGCCAGCTACCACCCCACCGAGATCAAGAACGAGGACGCCTGGATCGCC GCGGCCCAGGAGCTGGGCACCTACTACGACCTGACGACCATGAGCGTCGCCTACCCGCCCTCGCTGCACAAGCTGCCGGA GGTGAAGGCCAAGTTCGAGGCCGCGGGCGTCGACCACTTCGTGCAGCCGTTCATCGGCGAGTACGAGGGCAAGACCTATC CCCAGGAGTACACCGAGGAGGAGCGGGCGATCATCCGCCAGGTGATCTACTCCCGCCACGACTGGGAGTTCCTGCTCAAC CTGAAGCGTCCGGGCATGTGCAACGCCGGCTTCAAGTACCTGTTCGTCGATCCCGAGGGGAAGGTGTTCCAGTGCGGCGG AGCCCAGCACCTGAAGCCGCTGGGGGACCTGACCCAGTCGACCGAGATCACCTTCCATTCCGGTCCGCGGCCGTGCCCGG TGTCGGTCTGCCAGTGCGACACCGAGAACATCAACACCAAGGTGTTCGAGGACCACTACGCCTACCTCGACAAGAACCAG CACCGGTTCGCCTACCGCTTCGCCGAGGAGGCCAAGGAGGCGCCGTGGATGGACGAGTGGACGGTGGCTTACTAG
Upstream 100 bases:
>100_bases GAGGACTACTACGACCGCGGCACGACCGAGCTGGTCCGCGAGCTGTTCGCCGACGACATCGCGCTGTTCGGCTACGACAT CCCCTGGGCAGGAGCCGAGC
Downstream 100 bases:
>100_bases CCGCCCGCGCGTGGGGCCGCTAAGAGGTCACGACTGCGCCCAGGGACGTGCTTGGGGCGCTACGGGGGCGGCGCGAAGGG TGCCTTGAGATGAAGACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MFFKPLGRQAAKPAQAPLGAPAAAPPVEQATINVRFFTDYPVCNYKCPYCVAGHGPPEGRGPSPWDEDRYLQIIDNICKL PFPINIRIGVGGEFFISKVLVEGARRLGASENVRVLNLITNLSFHPKQYARILAGIPKEKVALVASYHPTEIKNEDAWIA AAQELGTYYDLTTMSVAYPPSLHKLPEVKAKFEAAGVDHFVQPFIGEYEGKTYPQEYTEEERAIIRQVIYSRHDWEFLLN LKRPGMCNAGFKYLFVDPEGKVFQCGGAQHLKPLGDLTQSTEITFHSGPRPCPVSVCQCDTENINTKVFEDHYAYLDKNQ HRFAYRFAEEAKEAPWMDEWTVAY
Sequences:
>Translated_344_residues MFFKPLGRQAAKPAQAPLGAPAAAPPVEQATINVRFFTDYPVCNYKCPYCVAGHGPPEGRGPSPWDEDRYLQIIDNICKL PFPINIRIGVGGEFFISKVLVEGARRLGASENVRVLNLITNLSFHPKQYARILAGIPKEKVALVASYHPTEIKNEDAWIA AAQELGTYYDLTTMSVAYPPSLHKLPEVKAKFEAAGVDHFVQPFIGEYEGKTYPQEYTEEERAIIRQVIYSRHDWEFLLN LKRPGMCNAGFKYLFVDPEGKVFQCGGAQHLKPLGDLTQSTEITFHSGPRPCPVSVCQCDTENINTKVFEDHYAYLDKNQ HRFAYRFAEEAKEAPWMDEWTVAY >Mature_344_residues MFFKPLGRQAAKPAQAPLGAPAAAPPVEQATINVRFFTDYPVCNYKCPYCVAGHGPPEGRGPSPWDEDRYLQIIDNICKL PFPINIRIGVGGEFFISKVLVEGARRLGASENVRVLNLITNLSFHPKQYARILAGIPKEKVALVASYHPTEIKNEDAWIA AAQELGTYYDLTTMSVAYPPSLHKLPEVKAKFEAAGVDHFVQPFIGEYEGKTYPQEYTEEERAIIRQVIYSRHDWEFLLN LKRPGMCNAGFKYLFVDPEGKVFQCGGAQHLKPLGDLTQSTEITFHSGPRPCPVSVCQCDTENINTKVFEDHYAYLDKNQ HRFAYRFAEEAKEAPWMDEWTVAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38827; Mature: 38827
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFKPLGRQAAKPAQAPLGAPAAAPPVEQATINVRFFTDYPVCNYKCPYCVAGHGPPEGR CCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCCCCC GPSPWDEDRYLQIIDNICKLPFPINIRIGVGGEFFISKVLVEGARRLGASENVRVLNLIT CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEC NLSFHPKQYARILAGIPKEKVALVASYHPTEIKNEDAWIAAAQELGTYYDLTTMSVAYPP CCCCCHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEEEEEECCC SLHKLPEVKAKFEAAGVDHFVQPFIGEYEGKTYPQEYTEEERAIIRQVIYSRHDWEFLLN CCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE LKRPGMCNAGFKYLFVDPEGKVFQCGGAQHLKPLGDLTQSTEITFHSGPRPCPVSVCQCD CCCCCCCCCCCEEEEECCCCCEEECCCCHHCCHHHHCCCCCEEEECCCCCCCCCCEEECC TENINTKVFEDHYAYLDKNQHRFAYRFAEEAKEAPWMDEWTVAY CCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEECC >Mature Secondary Structure MFFKPLGRQAAKPAQAPLGAPAAAPPVEQATINVRFFTDYPVCNYKCPYCVAGHGPPEGR CCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCCCCC GPSPWDEDRYLQIIDNICKLPFPINIRIGVGGEFFISKVLVEGARRLGASENVRVLNLIT CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEC NLSFHPKQYARILAGIPKEKVALVASYHPTEIKNEDAWIAAAQELGTYYDLTTMSVAYPP CCCCCHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEEEEEECCC SLHKLPEVKAKFEAAGVDHFVQPFIGEYEGKTYPQEYTEEERAIIRQVIYSRHDWEFLLN CCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE LKRPGMCNAGFKYLFVDPEGKVFQCGGAQHLKPLGDLTQSTEITFHSGPRPCPVSVCQCD CCCCCCCCCCCEEEEECCCCCEEECCCCHHCCHHHHCCCCCEEEECCCCCCCCCCEEECC TENINTKVFEDHYAYLDKNQHRFAYRFAEEAKEAPWMDEWTVAY CCCCCCEEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA