| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is flbA [H]
Identifier: 197103938
GI number: 197103938
Start: 490480
End: 491736
Strand: Direct
Name: flbA [H]
Synonym: PHZ_c0472
Alternate gene names: 197103938
Gene position: 490480-491736 (Clockwise)
Preceding gene: 197103936
Following gene: 197103939
Centisome position: 12.27
GC content: 75.74
Gene sequence:
>1257_bases ATGCGATCGGGAGCACACGAAGGACAGCGCGCGACCGTCGGGCCGGCGTCCGATCCGGCGGCGCTCAGGCGGCTGTTCGA CCAGGCGGTCCAACGGCACCAGGCCGGCGACCACGCGGCGGCCGGCAGGCTCTACGAGGCCGTGCTCGCCGGCGGGCCGG ACCGGGGGCTGCGCGCCGACGTGCTGGCCAACCTGGCCTCGATCCTGCGCAACCAGGACCGGTTCGCCGAGGCGGAGGCC GCGCTGCGGGACTGCCTGCGGCTGTCGCCGGACCACCTGTCGGGCCTGGCGAACCTCGCCAACCTGCTGATCGTCGCCCA GCGCTACGAGGAGGCGCGGGCCTGCATCGCCCGCTCGCTCGCCCTCGCGCCGGACGACCGCCTGCACCGCTACCGGCTGG GCCTGGCCTGGCTGGGCGAGGGCGACTACGCCGCGGGCCTGCCGCTGTACGAGCTGCGCGACGACCGGGCGCGGACGCCC CTGCGGTCCATGTCCACGCCGGAGTGGGACGGCGGCCCGCTGGAGGGCCGTTCGGTCTTCATCTGGCGCGAGCAGGGCTA CGGCGACGAGCTGCAGATGGCCCGCTTCATCCCGGCGCTGAAGGCCGCCGGCGCCGGGCGGGTGATGGTGGCGCCCACGC GGGCGCTGGTGCGCCTGTTCGGGACGCTGGAGGGCGTGGACGAGGTGCTGGAGATGACCGGGCGGGTGGCCGCGCCGCCG CACGACGTCTGGGCCCTGCCGTTCTCGCTGCCGCACCGGCTGGGCGTCACCCTCGAAACCCTGCCGGCCGCGCCGTACCT TCGCGCGCCCGAGGCGGCGCGGGCGGCGTGGAAGGGCTTCGCGCCGGAGGGCGGGGTGGGCTTCGTCTGGCACGGCAACC CCGCGCAGCCGGTGGAACGCTACCGCGGCCTGCCCTCGCCCGAGCTGCTGCAGCCGCTGGCCGAGCACGTGCGGCTGATC GACCTGCAGGAGCCGCGCGGCGATTTCGCGGACACCGCGGCCATCCTCGAGCAACTGGACCTCGTGATCACCACCGACAC CGCCATGGCGCACCTGGCGGGGGCGCTCGGGCGGCCGTGCTGGGTGATGCTGCCGGCCGTCGGCTGCGACTGGCGCTGGC TGCGGCGGCGGCCGGATTCCCCCTGGTACCCGTCGCTTCGCCTGTGGCGGCAGGAGACGCCGGGCGACTGGGCCCCGGTG ATCGCGGCCATGAAGCAGGAGCTGGCGTCGAACGGTCCGCCGGGACGGCGTCCTTGA
Upstream 100 bases:
>100_bases TGGCCCCGGAAGGAGCCTCGGCGGCGGGTTTAAAGGGGTGCGGCGGCCAGGCCAAGCCGCACGCCTTGGGGCTTTTCCGG AACTCCTCTAGACCTGGGGC
Downstream 100 bases:
>100_bases GCCGGCTGTCGGTCTTCCACCCCTCGGGCGCGCTGGGTCTGGGCGCCAACCCGTTCGGCAAGGACGTGGCCAACCTCCAG CTCATCCGGGCGCTGGCCCA
Product: TPR repeat protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MRSGAHEGQRATVGPASDPAALRRLFDQAVQRHQAGDHAAAGRLYEAVLAGGPDRGLRADVLANLASILRNQDRFAEAEA ALRDCLRLSPDHLSGLANLANLLIVAQRYEEARACIARSLALAPDDRLHRYRLGLAWLGEGDYAAGLPLYELRDDRARTP LRSMSTPEWDGGPLEGRSVFIWREQGYGDELQMARFIPALKAAGAGRVMVAPTRALVRLFGTLEGVDEVLEMTGRVAAPP HDVWALPFSLPHRLGVTLETLPAAPYLRAPEAARAAWKGFAPEGGVGFVWHGNPAQPVERYRGLPSPELLQPLAEHVRLI DLQEPRGDFADTAAILEQLDLVITTDTAMAHLAGALGRPCWVMLPAVGCDWRWLRRRPDSPWYPSLRLWRQETPGDWAPV IAAMKQELASNGPPGRRP
Sequences:
>Translated_418_residues MRSGAHEGQRATVGPASDPAALRRLFDQAVQRHQAGDHAAAGRLYEAVLAGGPDRGLRADVLANLASILRNQDRFAEAEA ALRDCLRLSPDHLSGLANLANLLIVAQRYEEARACIARSLALAPDDRLHRYRLGLAWLGEGDYAAGLPLYELRDDRARTP LRSMSTPEWDGGPLEGRSVFIWREQGYGDELQMARFIPALKAAGAGRVMVAPTRALVRLFGTLEGVDEVLEMTGRVAAPP HDVWALPFSLPHRLGVTLETLPAAPYLRAPEAARAAWKGFAPEGGVGFVWHGNPAQPVERYRGLPSPELLQPLAEHVRLI DLQEPRGDFADTAAILEQLDLVITTDTAMAHLAGALGRPCWVMLPAVGCDWRWLRRRPDSPWYPSLRLWRQETPGDWAPV IAAMKQELASNGPPGRRP >Mature_418_residues MRSGAHEGQRATVGPASDPAALRRLFDQAVQRHQAGDHAAAGRLYEAVLAGGPDRGLRADVLANLASILRNQDRFAEAEA ALRDCLRLSPDHLSGLANLANLLIVAQRYEEARACIARSLALAPDDRLHRYRLGLAWLGEGDYAAGLPLYELRDDRARTP LRSMSTPEWDGGPLEGRSVFIWREQGYGDELQMARFIPALKAAGAGRVMVAPTRALVRLFGTLEGVDEVLEMTGRVAAPP HDVWALPFSLPHRLGVTLETLPAAPYLRAPEAARAAWKGFAPEGGVGFVWHGNPAQPVERYRGLPSPELLQPLAEHVRLI DLQEPRGDFADTAAILEQLDLVITTDTAMAHLAGALGRPCWVMLPAVGCDWRWLRRRPDSPWYPSLRLWRQETPGDWAPV IAAMKQELASNGPPGRRP
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45821; Mature: 45821
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGAHEGQRATVGPASDPAALRRLFDQAVQRHQAGDHAAAGRLYEAVLAGGPDRGLRAD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHH VLANLASILRNQDRFAEAEAALRDCLRLSPDHLSGLANLANLLIVAQRYEEARACIARSL HHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAPDDRLHRYRLGLAWLGEGDYAAGLPLYELRDDRARTPLRSMSTPEWDGGPLEGRSVF HCCCCHHHHHHHHCEEEECCCCCCCCCCHHHHCCCHHCCCHHHCCCCCCCCCCCCCCEEE IWREQGYGDELQMARFIPALKAAGAGRVMVAPTRALVRLFGTLEGVDEVLEMTGRVAAPP EEECCCCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCC HDVWALPFSLPHRLGVTLETLPAAPYLRAPEAARAAWKGFAPEGGVGFVWHGNPAQPVER CCEEECCCCCHHHHCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHH YRGLPSPELLQPLAEHVRLIDLQEPRGDFADTAAILEQLDLVITTDTAMAHLAGALGRPC HCCCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCEEEECHHHHHHHHHHHCCCE WVMLPAVGCDWRWLRRRPDSPWYPSLRLWRQETPGDWAPVIAAMKQELASNGPPGRRP EEEECCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRSGAHEGQRATVGPASDPAALRRLFDQAVQRHQAGDHAAAGRLYEAVLAGGPDRGLRAD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHH VLANLASILRNQDRFAEAEAALRDCLRLSPDHLSGLANLANLLIVAQRYEEARACIARSL HHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAPDDRLHRYRLGLAWLGEGDYAAGLPLYELRDDRARTPLRSMSTPEWDGGPLEGRSVF HCCCCHHHHHHHHCEEEECCCCCCCCCCHHHHCCCHHCCCHHHCCCCCCCCCCCCCCEEE IWREQGYGDELQMARFIPALKAAGAGRVMVAPTRALVRLFGTLEGVDEVLEMTGRVAAPP EEECCCCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCC HDVWALPFSLPHRLGVTLETLPAAPYLRAPEAARAAWKGFAPEGGVGFVWHGNPAQPVER CCEEECCCCCHHHHCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHH YRGLPSPELLQPLAEHVRLIDLQEPRGDFADTAAILEQLDLVITTDTAMAHLAGALGRPC HCCCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCEEEECHHHHHHHHHHHCCCE WVMLPAVGCDWRWLRRRPDSPWYPSLRLWRQETPGDWAPVIAAMKQELASNGPPGRRP EEEECCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]